RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 SCAIQ8N9R8 606 aa5.96□□□□□ -1.46
SF3B1-209ENST00000479532 OR5AR1Q8NGP9 310 aa5.96□□□□□ -1.46
SF3B1-209ENST00000479532 ACMSDQ8TDX5 336 aa5.96□□□□□ -1.46
SF3B1-209ENST00000479532 EEF1AKMT1Q8WVE0 214 aa5.96□□□□□ -1.46
SF3B1-209ENST00000479532 ATL1Q8WXF7 558 aa5.96□□□□□ -1.46
SF3B1-209ENST00000479532 SLC22A18Q96BI1 424 aa5.96□□□□□ -1.46
SF3B1-209ENST00000479532 PDLIM5Q96HC4 596 aaKnown RBP5.96□□□□□ -1.46
SF3B1-209ENST00000479532 GFM1Q96RP9 751 aaKnown RBP5.96□□□□□ -1.46
SF3B1-209ENST00000479532 SH3GL1Q99961 368 aa5.96□□□□□ -1.46
SF3B1-209ENST00000479532 MRPL46Q9H2W6 279 aaKnown RBP5.96□□□□□ -1.46
SF3B1-209ENST00000479532 LRRN3Q9H3W5 708 aa5.96□□□□□ -1.46
SF3B1-209ENST00000479532 TFB2MQ9H5Q4 396 aaKnown RBP5.96□□□□□ -1.46
SF3B1-209ENST00000479532 DCLRE1BQ9H816 532 aa5.96□□□□□ -1.46
SF3B1-209ENST00000479532 TXLNGQ9NUQ3 528 aa5.96□□□□□ -1.46
SF3B1-209ENST00000479532 AKAP7Q9P0M2 348 aaPredicted RBP5.96□□□□□ -1.46
SF3B1-209ENST00000479532 ZNF624Q9P2J8 865 aaPredicted RBP5.96□□□□□ -1.46
SF3B1-209ENST00000479532 GALPQ9UBC7 116 aa5.96□□□□□ -1.46
SF3B1-209ENST00000479532 TBK1Q9UHD2 729 aa5.96□□□□□ -1.46
SF3B1-209ENST00000479532 GPR160Q9UJ42 338 aa5.96□□□□□ -1.46
SF3B1-209ENST00000479532 L3MBTL1Q9Y468 752 aa5.96□□□□□ -1.46
SF3B1-209ENST00000479532 BPTFQ12830 3046 aa5.96□□□□□ -1.46
SF3B1-209ENST00000479532 MYO15AQ9UKN7 3530 aa5.96□□□□□ -1.46
SF3B1-209ENST00000479532 ASCC3Q8N3C0 2202 aaKnown RBP5.95□□□□□ -1.46
SF3B1-209ENST00000479532 CABIN1Q9Y6J0 2220 aa5.95□□□□□ -1.46
SF3B1-209ENST00000479532 IGHV1OR21-1A0A087WYE8 117 aa5.95□□□□□ -1.46
SF3B1-209ENST00000479532 LY6G6EA0A0G2JKS1 128 aa5.95□□□□□ -1.46
SF3B1-209ENST00000479532 SPAARA0A1B0GVQ0 90 aa5.95□□□□□ -1.46
SF3B1-209ENST00000479532 GSAPA4D1B5 854 aa5.95□□□□□ -1.46
SF3B1-209ENST00000479532 TMEM247A6NEH6 219 aa5.95□□□□□ -1.46
SF3B1-209ENST00000479532 C2orf74A8MZ97 194 aa5.95□□□□□ -1.46
SF3B1-209ENST00000479532 SCDO00767 359 aa5.95□□□□□ -1.46
SF3B1-209ENST00000479532 DVL2O14641 736 aa5.95□□□□□ -1.46
SF3B1-209ENST00000479532 PPM1DO15297 605 aa5.95□□□□□ -1.46
SF3B1-209ENST00000479532 RGS16O15492 202 aaPredicted RBP5.95□□□□□ -1.46
SF3B1-209ENST00000479532 ULK1O75385 1050 aa5.95□□□□□ -1.46
SF3B1-209ENST00000479532 MTRF1O75570 445 aaKnown RBP5.95□□□□□ -1.46
SF3B1-209ENST00000479532 KLHL2O95198 593 aa5.95□□□□□ -1.46
SF3B1-209ENST00000479532 CCNDBP1O95273 360 aa5.95□□□□□ -1.46
SF3B1-209ENST00000479532 KCNK5O95279 499 aa5.95□□□□□ -1.46
SF3B1-209ENST00000479532 CPNE6O95741 557 aa5.95□□□□□ -1.46
SF3B1-209ENST00000479532 C2P06681 752 aa5.95□□□□□ -1.46
SF3B1-209ENST00000479532 ADRB1P08588 477 aa5.95□□□□□ -1.46
SF3B1-209ENST00000479532 ANXA5P08758 320 aa5.95□□□□□ -1.46
SF3B1-209ENST00000479532 RBP1P09455 135 aa5.95□□□□□ -1.46
SF3B1-209ENST00000479532 FTH1P19P0C7X4 201 aa5.95□□□□□ -1.46
SF3B1-209ENST00000479532 GLI4P10075 376 aa5.95□□□□□ -1.46
SF3B1-209ENST00000479532 MYF5P13349 255 aa5.95□□□□□ -1.46
SF3B1-209ENST00000479532 RAC2P15153 192 aa5.95□□□□□ -1.46
SF3B1-209ENST00000479532 VHLP40337 213 aa5.95□□□□□ -1.46
SF3B1-209ENST00000479532 BDKRB1P46663 353 aa5.95□□□□□ -1.46
SF3B1-209ENST00000479532 RAB28P51157 221 aa5.95□□□□□ -1.46
SF3B1-209ENST00000479532 OR1D5P58170 312 aa5.95□□□□□ -1.46
SF3B1-209ENST00000479532 NCALDP61601 193 aa5.95□□□□□ -1.46
SF3B1-209ENST00000479532 TIAL1Q01085 375 aaKnown RBP eCLIP5.95□□□□□ -1.46
SF3B1-209ENST00000479532 ARHGAP19Q14CB8 494 aa5.95□□□□□ -1.46
SF3B1-209ENST00000479532 KRT71Q3SY84 523 aa5.95□□□□□ -1.46
SF3B1-209ENST00000479532 AMZ1Q400G9 498 aa5.95□□□□□ -1.46
SF3B1-209ENST00000479532 EMC4Q5J8M3 183 aa5.95□□□□□ -1.46
SF3B1-209ENST00000479532 CPZQ66K79 652 aa5.95□□□□□ -1.46
SF3B1-209ENST00000479532 ANKS6Q68DC2 871 aa5.95□□□□□ -1.46
SF3B1-209ENST00000479532 TMEM154Q6P9G4 183 aa5.95□□□□□ -1.46
SF3B1-209ENST00000479532 TIFABQ6ZNK6 161 aa5.95□□□□□ -1.46
SF3B1-209ENST00000479532 RBM44Q6ZP01 1051 aaKnown RBP5.95□□□□□ -1.46
SF3B1-209ENST00000479532 CMC1Q7Z7K0 106 aa5.95□□□□□ -1.46
SF3B1-209ENST00000479532 AMIGO1Q86WK6 493 aa5.95□□□□□ -1.46
SF3B1-209ENST00000479532 GPSM1Q86YR5 675 aa5.95□□□□□ -1.46
SF3B1-209ENST00000479532 CEP97Q8IW35 865 aa5.95□□□□□ -1.46
SF3B1-209ENST00000479532 TCAIMQ8N3R3 496 aa5.95□□□□□ -1.46
SF3B1-209ENST00000479532 CLRN3Q8NCR9 226 aa5.95□□□□□ -1.46
SF3B1-209ENST00000479532 OR4E2Q8NGC2 313 aa5.95□□□□□ -1.46
SF3B1-209ENST00000479532 OR52E1Q8NGJ3 308 aa5.95□□□□□ -1.46
SF3B1-209ENST00000479532 OR9A1PQ8NGU1 263 aa5.95□□□□□ -1.46
SF3B1-209ENST00000479532 STAG3L4Q8TBR4 150 aa5.95□□□□□ -1.46
SF3B1-209ENST00000479532 WDR60Q8WVS4 1066 aa5.95□□□□□ -1.46
SF3B1-209ENST00000479532 DNAJC9Q8WXX5 260 aa5.95□□□□□ -1.46
SF3B1-209ENST00000479532 TLCD1Q96CP7 247 aa5.95□□□□□ -1.46
SF3B1-209ENST00000479532 PGM2Q96G03 612 aa5.95□□□□□ -1.46
SF3B1-209ENST00000479532 ZDHHC12Q96GR4 267 aa5.95□□□□□ -1.46
SF3B1-209ENST00000479532 VPS50Q96JG6 964 aa5.95□□□□□ -1.46
SF3B1-209ENST00000479532 SCYL1Q96KG9 808 aa5.95□□□□□ -1.46
SF3B1-209ENST00000479532 CCDC138Q96M89 665 aa5.95□□□□□ -1.46
SF3B1-209ENST00000479532 GBP5Q96PP8 586 aa5.95□□□□□ -1.46
SF3B1-209ENST00000479532 CD180Q99467 661 aa5.95□□□□□ -1.46
SF3B1-209ENST00000479532 EGFL8Q99944 293 aa5.95□□□□□ -1.46
SF3B1-209ENST00000479532 TMEM109Q9BVC6 243 aa5.95□□□□□ -1.46
SF3B1-209ENST00000479532 TBC1D10AQ9BXI6 508 aa5.95□□□□□ -1.46
SF3B1-209ENST00000479532 STRADBQ9C0K7 418 aa5.95□□□□□ -1.46
SF3B1-209ENST00000479532 LRMDAQ9H2I8 198 aa5.95□□□□□ -1.46
SF3B1-209ENST00000479532 PARVBQ9HBI1 364 aa5.95□□□□□ -1.46
SF3B1-209ENST00000479532 HRASLS2Q9NWW9 162 aa5.95□□□□□ -1.46
SF3B1-209ENST00000479532 ARL15Q9NXU5 204 aa5.95□□□□□ -1.46
SF3B1-209ENST00000479532 IL20Q9NYY1 176 aa5.95□□□□□ -1.46
SF3B1-209ENST00000479532 OR6C2Q9NZP2 312 aa5.95□□□□□ -1.46
SF3B1-209ENST00000479532 SENP1Q9P0U3 644 aa5.95□□□□□ -1.46
SF3B1-209ENST00000479532 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.95□□□□□ -1.46
SF3B1-209ENST00000479532 DCDC2Q9UHG0 476 aa5.95□□□□□ -1.46
SF3B1-209ENST00000479532 RUVBL2Q9Y230 463 aaKnown RBP5.95□□□□□ -1.46
SF3B1-209ENST00000479532 MED16Q9Y2X0 877 aa5.95□□□□□ -1.46
SF3B1-209ENST00000479532 OARD1Q9Y530 152 aa5.95□□□□□ -1.46
SF3B1-209ENST00000479532 ENTPD2Q9Y5L3 495 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms