RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 PSMD11O00231 422 aa23.63■■□□□ 1.37
SYNGAP1-206ENST00000479510 NRG2O14511 850 aaPredicted RBP23.63■■□□□ 1.37
SYNGAP1-206ENST00000479510 ADAM23O75077 832 aa23.63■■□□□ 1.37
SYNGAP1-206ENST00000479510 C1orf105O95561 183 aa23.63■■□□□ 1.37
SYNGAP1-206ENST00000479510 FGF19O95750 216 aa23.63■■□□□ 1.37
SYNGAP1-206ENST00000479510 VIPP01282 170 aa23.63■■□□□ 1.37
SYNGAP1-206ENST00000479510 FURINP09958 794 aa23.63■■□□□ 1.37
SYNGAP1-206ENST00000479510 HLA-EP13747 358 aa23.63■■□□□ 1.37
SYNGAP1-206ENST00000479510 GABRB1P18505 474 aa23.63■■□□□ 1.37
SYNGAP1-206ENST00000479510 TPP2P29144 1249 aaPredicted RBP23.63■■□□□ 1.37
SYNGAP1-206ENST00000479510 NNMTP40261 264 aa23.63■■□□□ 1.37
SYNGAP1-206ENST00000479510 OLR1P78380 273 aa23.63■■□□□ 1.37
SYNGAP1-206ENST00000479510 ZNF658BQ4V348 819 aaPredicted RBP23.63■■□□□ 1.37
SYNGAP1-206ENST00000479510 TOR1AIP1Q5JTV8 583 aa23.63■■□□□ 1.37
SYNGAP1-206ENST00000479510 UNC5DQ6UXZ4 953 aa23.63■■□□□ 1.37
SYNGAP1-206ENST00000479510 SLC46A3Q7Z3Q1 461 aa23.63■■□□□ 1.37
SYNGAP1-206ENST00000479510 TMPRSS11BQ86T26 416 aa23.63■■□□□ 1.37
SYNGAP1-206ENST00000479510 ZNF605Q86T29 641 aa23.63■■□□□ 1.37
SYNGAP1-206ENST00000479510 CORO1BQ9BR76 489 aa23.63■■□□□ 1.37
SYNGAP1-206ENST00000479510 SGPP1Q9BX95 441 aa23.63■■□□□ 1.37
SYNGAP1-206ENST00000479510 DMRT3Q9NQL9 472 aa23.63■■□□□ 1.37
SYNGAP1-206ENST00000479510 C1GALT1Q9NS00 363 aa23.63■■□□□ 1.37
SYNGAP1-206ENST00000479510 RAPGEFL1Q9UHV5 662 aa23.63■■□□□ 1.37
SYNGAP1-206ENST00000479510 CCL26Q9Y258 94 aa23.63■■□□□ 1.37
SYNGAP1-206ENST00000479510 TSC22D4Q9Y3Q8 395 aa23.63■■□□□ 1.37
SYNGAP1-206ENST00000479510 UGT2A1Q9Y4X1 527 aa23.63■■□□□ 1.37
SYNGAP1-206ENST00000479510 M0R082 166 aa23.62■■□□□ 1.37
SYNGAP1-206ENST00000479510 ETFAP13804 333 aa23.62■■□□□ 1.37
SYNGAP1-206ENST00000479510 TYRP14679 529 aa23.62■■□□□ 1.37
SYNGAP1-206ENST00000479510 EEF1A2Q05639 463 aaKnown RBP23.62■■□□□ 1.37
SYNGAP1-206ENST00000479510 BCL7AQ4VC05 210 aa23.62■■□□□ 1.37
SYNGAP1-206ENST00000479510 HIST2H2AA3Q6FI13 130 aa23.62■■□□□ 1.37
SYNGAP1-206ENST00000479510 ADNP2Q6IQ32 1131 aa23.62■■□□□ 1.37
SYNGAP1-206ENST00000479510 COMMD6Q7Z4G1 85 aa23.62■■□□□ 1.37
SYNGAP1-206ENST00000479510 LGI4Q8N135 537 aa23.62■■□□□ 1.37
SYNGAP1-206ENST00000479510 AMER2Q8N7J2 671 aa23.62■■□□□ 1.37
SYNGAP1-206ENST00000479510 KBTBD8Q8NFY9 601 aa23.62■■□□□ 1.37
SYNGAP1-206ENST00000479510 C9orf43Q8TAL5 461 aaPredicted RBP23.62■■□□□ 1.37
SYNGAP1-206ENST00000479510 PPCDCQ96CD2 204 aa23.62■■□□□ 1.37
SYNGAP1-206ENST00000479510 VWCEQ96DN2 955 aa23.62■■□□□ 1.37
SYNGAP1-206ENST00000479510 NXF2Q9GZY0 626 aaKnown RBP23.62■■□□□ 1.37
SYNGAP1-206ENST00000479510 ZNF556Q9HAH1 456 aa23.62■■□□□ 1.37
SYNGAP1-206ENST00000479510 SPHK2Q9NRA0 654 aa23.62■■□□□ 1.37
SYNGAP1-206ENST00000479510 CCDC59Q9P031 241 aaKnown RBP23.62■■□□□ 1.37
SYNGAP1-206ENST00000479510 FAM8A1Q9UBU6 413 aa23.62■■□□□ 1.37
SYNGAP1-206ENST00000479510 IL36AQ9UHA7 158 aa23.62■■□□□ 1.37
SYNGAP1-206ENST00000479510 METTL15A6NJ78 407 aa23.61■■□□□ 1.37
SYNGAP1-206ENST00000479510 H3BM21 787 aa23.61■■□□□ 1.37
SYNGAP1-206ENST00000479510 KRT75O95678 551 aa23.61■■□□□ 1.37
SYNGAP1-206ENST00000479510 C1GALT1C1LP0DN25 315 aa23.61■■□□□ 1.37
SYNGAP1-206ENST00000479510 MMP12P39900 470 aa23.61■■□□□ 1.37
SYNGAP1-206ENST00000479510 EIF2DP41214 584 aaKnown RBP23.61■■□□□ 1.37
SYNGAP1-206ENST00000479510 PRIM2P49643 509 aa23.61■■□□□ 1.37
SYNGAP1-206ENST00000479510 SPIBQ01892 262 aa23.61■■□□□ 1.37
SYNGAP1-206ENST00000479510 CDC20Q12834 499 aa23.61■■□□□ 1.37
SYNGAP1-206ENST00000479510 COX20Q5RI15 118 aa23.61■■□□□ 1.37
SYNGAP1-206ENST00000479510 TMEM220Q6QAJ8 160 aa23.61■■□□□ 1.37
SYNGAP1-206ENST00000479510 IKBIPQ70UQ0 350 aa23.61■■□□□ 1.37
SYNGAP1-206ENST00000479510 ARMC8Q8IUR7 673 aa23.61■■□□□ 1.37
SYNGAP1-206ENST00000479510 ZNF480Q8WV37 535 aa23.61■■□□□ 1.37
SYNGAP1-206ENST00000479510 AP2M1Q96CW1 435 aa23.61■■□□□ 1.37
SYNGAP1-206ENST00000479510 MRGPRX3Q96LB0 322 aa23.61■■□□□ 1.37
SYNGAP1-206ENST00000479510 SP140LQ9H930 580 aa23.61■■□□□ 1.37
SYNGAP1-206ENST00000479510 ITM2CQ9NQX7 267 aa23.61■■□□□ 1.37
SYNGAP1-206ENST00000479510 TMEM184CQ9NVA4 438 aa23.61■■□□□ 1.37
SYNGAP1-206ENST00000479510 TBC1D14Q9P2M4 693 aa23.61■■□□□ 1.37
SYNGAP1-206ENST00000479510 NUP214P35658 2090 aaPredicted RBP23.61■■□□□ 1.37
SYNGAP1-206ENST00000479510 RPLP0P05388 317 aaKnown RBP23.61■■□□□ 1.37
SYNGAP1-206ENST00000479510 TBPL1P62380 186 aa23.61■■□□□ 1.37
SYNGAP1-206ENST00000479510 CDK6Q00534 326 aa23.61■■□□□ 1.37
SYNGAP1-206ENST00000479510 FAM71E1Q6IPT2 247 aa23.61■■□□□ 1.37
SYNGAP1-206ENST00000479510 PIP5K1AQ99755 562 aa23.61■■□□□ 1.37
SYNGAP1-206ENST00000479510 MAPKAP1Q9BPZ7 522 aa23.61■■□□□ 1.37
SYNGAP1-206ENST00000479510 HTTP42858 3142 aa23.61■■□□□ 1.37
SYNGAP1-206ENST00000479510 PLK4O00444 970 aa23.6■■□□□ 1.37
SYNGAP1-206ENST00000479510 MPZL2O60487 215 aa23.6■■□□□ 1.37
SYNGAP1-206ENST00000479510 C6orf47O95873 294 aa23.6■■□□□ 1.37
SYNGAP1-206ENST00000479510 RB1P06400 928 aa23.6■■□□□ 1.37
SYNGAP1-206ENST00000479510 NPPBP16860 134 aa23.6■■□□□ 1.37
SYNGAP1-206ENST00000479510 SLC19A1P41440 591 aa23.6■■□□□ 1.37
SYNGAP1-206ENST00000479510 PIK3CBP42338 1070 aa23.6■■□□□ 1.37
SYNGAP1-206ENST00000479510 LIMS1P48059 325 aa23.6■■□□□ 1.37
SYNGAP1-206ENST00000479510 CDH12P55289 794 aa23.6■■□□□ 1.37
SYNGAP1-206ENST00000479510 ERAP2Q6P179 960 aa23.6■■□□□ 1.37
SYNGAP1-206ENST00000479510 ANGPTL8Q6UXH0 198 aa23.6■■□□□ 1.37
SYNGAP1-206ENST00000479510 ARMCX6Q7L4S7 300 aa23.6■■□□□ 1.37
SYNGAP1-206ENST00000479510 KREMEN2Q8NCW0 462 aa23.6■■□□□ 1.37
SYNGAP1-206ENST00000479510 C16orf78Q8WTQ4 265 aa23.6■■□□□ 1.37
SYNGAP1-206ENST00000479510 UBE2E3Q969T4 207 aa23.6■■□□□ 1.37
SYNGAP1-206ENST00000479510 CPNE5Q9HCH3 593 aa23.6■■□□□ 1.37
SYNGAP1-206ENST00000479510 PRM3Q9NNZ6 103 aa23.6■■□□□ 1.37
SYNGAP1-206ENST00000479510 TAS2R9Q9NYW1 312 aa23.6■■□□□ 1.37
SYNGAP1-206ENST00000479510 SH3D21A4FU49 640 aa23.6■■□□□ 1.37
SYNGAP1-206ENST00000479510 ADH1AP07327 375 aa23.6■■□□□ 1.37
SYNGAP1-206ENST00000479510 C21orf33P30042 268 aaPredicted RBP23.6■■□□□ 1.37
SYNGAP1-206ENST00000479510 XCR1P46094 333 aa23.6■■□□□ 1.37
SYNGAP1-206ENST00000479510 SLBPQ14493 270 aaKnown RBP eCLIP23.6■■□□□ 1.37
SYNGAP1-206ENST00000479510 IRF3Q14653 427 aa23.6■■□□□ 1.37
SYNGAP1-206ENST00000479510 SYT16Q17RD7 645 aa23.6■■□□□ 1.37
SYNGAP1-206ENST00000479510 EXOC3L2Q2M3D2 409 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms