RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 KIAA0930Q6ICG6 404 aaPredicted RBP15□□□□□ -0.01
DDX56-210ENST00000479440 KIAA0408Q6ZU52 694 aa15□□□□□ -0.01
DDX56-210ENST00000479440 ABHD13Q7L211 337 aa15□□□□□ -0.01
DDX56-210ENST00000479440 MDGA2Q7Z553 956 aa15□□□□□ -0.01
DDX56-210ENST00000479440 WDR53Q7Z5U6 358 aaPredicted RBP15□□□□□ -0.01
DDX56-210ENST00000479440 CILP2Q8IUL8 1156 aa15□□□□□ -0.01
DDX56-210ENST00000479440 TBC1D19Q8N5T2 526 aa15□□□□□ -0.01
DDX56-210ENST00000479440 PSD4Q8NDX1 1056 aa15□□□□□ -0.01
DDX56-210ENST00000479440 ACRBPQ8NEB7 543 aa15□□□□□ -0.01
DDX56-210ENST00000479440 NFAM1Q8NET5 270 aaPredicted RBP15□□□□□ -0.01
DDX56-210ENST00000479440 B3GNT7Q8NFL0 401 aa15□□□□□ -0.01
DDX56-210ENST00000479440 OR5M9Q8NGP3 310 aa15□□□□□ -0.01
DDX56-210ENST00000479440 GIMAP7Q8NHV1 300 aa15□□□□□ -0.01
DDX56-210ENST00000479440 PWWP2AQ96N64 755 aa15□□□□□ -0.01
DDX56-210ENST00000479440 SLC30A3Q99726 388 aa15□□□□□ -0.01
DDX56-210ENST00000479440 CCDC77Q9BR77 488 aa15□□□□□ -0.01
DDX56-210ENST00000479440 KIFC1Q9BW19 673 aa15□□□□□ -0.01
DDX56-210ENST00000479440 PRDM9Q9NQV7 894 aa15□□□□□ -0.01
DDX56-210ENST00000479440 HPF1Q9NWY4 346 aa15□□□□□ -0.01
DDX56-210ENST00000479440 SYBUQ9NX95 663 aa15□□□□□ -0.01
DDX56-210ENST00000479440 B4GALT7Q9UBV7 327 aa15□□□□□ -0.01
DDX56-210ENST00000479440 FBXW2Q9UKT8 454 aa15□□□□□ -0.01
DDX56-210ENST00000479440 ERVK-11Q9UQG0 969 aa15□□□□□ -0.01
DDX56-210ENST00000479440 FBN3Q75N90 2809 aa14.99□□□□□ -0.01
DDX56-210ENST00000479440 LCMT2O60294 686 aaKnown RBP14.99□□□□□ -0.01
DDX56-210ENST00000479440 CEP104O60308 925 aa14.99□□□□□ -0.01
DDX56-210ENST00000479440 WDR1O75083 606 aa14.99□□□□□ -0.01
DDX56-210ENST00000479440 RAF1P04049 648 aa14.99□□□□□ -0.01
DDX56-210ENST00000479440 GLI4P10075 376 aa14.99□□□□□ -0.01
DDX56-210ENST00000479440 CDH1P12830 882 aa14.99□□□□□ -0.01
DDX56-210ENST00000479440 ETS1P14921 441 aa14.99□□□□□ -0.01
DDX56-210ENST00000479440 MAOAP21397 527 aa14.99□□□□□ -0.01
DDX56-210ENST00000479440 MGAT1P26572 445 aa14.99□□□□□ -0.01
DDX56-210ENST00000479440 ADSLP30566 484 aaPredicted RBP14.99□□□□□ -0.01
DDX56-210ENST00000479440 RGS1Q08116 209 aa14.99□□□□□ -0.01
DDX56-210ENST00000479440 PWP1Q13610 501 aa14.99□□□□□ -0.01
DDX56-210ENST00000479440 TERF2Q15554 542 aa14.99□□□□□ -0.01
DDX56-210ENST00000479440 NDUFAF5Q5TEU4 345 aa14.99□□□□□ -0.01
DDX56-210ENST00000479440 CES3Q6UWW8 571 aa14.99□□□□□ -0.01
DDX56-210ENST00000479440 GK5Q6ZS86 529 aa14.99□□□□□ -0.01
DDX56-210ENST00000479440 PRUNE1Q86TP1 453 aa14.99□□□□□ -0.01
DDX56-210ENST00000479440 CDC20BQ86Y33 519 aa14.99□□□□□ -0.01
DDX56-210ENST00000479440 APCDD1LQ8NCL9 501 aa14.99□□□□□ -0.01
DDX56-210ENST00000479440 OR2M7Q8NG81 312 aa14.99□□□□□ -0.01
DDX56-210ENST00000479440 LRRC46Q96FV0 321 aa14.99□□□□□ -0.01
DDX56-210ENST00000479440 C18orf12Q96KH6 178 aa14.99□□□□□ -0.01
DDX56-210ENST00000479440 KCMF1Q9P0J7 381 aa14.99□□□□□ -0.01
DDX56-210ENST00000479440 SOX13Q9UN79 622 aa14.99□□□□□ -0.01
DDX56-210ENST00000479440 SH2B3Q9UQQ2 575 aa14.99□□□□□ -0.01
DDX56-210ENST00000479440 FAM215AQ9Y5M1 114 aa14.99□□□□□ -0.01
DDX56-210ENST00000479440 PHF3Q92576 2039 aaKnown RBP14.99□□□□□ -0.01
DDX56-210ENST00000479440 NIPBLQ6KC79 2804 aaeCLIP14.98□□□□□ -0.01
DDX56-210ENST00000479440 IGKV3D-11A0A0A0MRZ8 115 aa14.98□□□□□ -0.01
DDX56-210ENST00000479440 A0A0G2JNJ9 132 aa14.98□□□□□ -0.01
DDX56-210ENST00000479440 A6NNC1 897 aa14.98□□□□□ -0.01
DDX56-210ENST00000479440 EIF3FO00303 357 aaPredicted RBP14.98□□□□□ -0.01
DDX56-210ENST00000479440 MYO1DO94832 1006 aa14.98□□□□□ -0.01
DDX56-210ENST00000479440 FLYWCH1Q4VC44 716 aa14.98□□□□□ -0.01
DDX56-210ENST00000479440 LRRC8EQ6NSJ5 796 aa14.98□□□□□ -0.01
DDX56-210ENST00000479440 LCTLQ6UWM7 567 aa14.98□□□□□ -0.01
DDX56-210ENST00000479440 CENPUQ71F23 418 aa14.98□□□□□ -0.01
DDX56-210ENST00000479440 FAM109AQ8N4B1 249 aa14.98□□□□□ -0.01
DDX56-210ENST00000479440 VMP1Q96GC9 406 aa14.98□□□□□ -0.01
DDX56-210ENST00000479440 HAUS8Q9BT25 410 aa14.98□□□□□ -0.01
DDX56-210ENST00000479440 TTTY12Q9BZ98 90 aa14.98□□□□□ -0.01
DDX56-210ENST00000479440 ATG10Q9H0Y0 220 aa14.98□□□□□ -0.01
DDX56-210ENST00000479440 CLK4Q9HAZ1 481 aaKnown RBP14.98□□□□□ -0.01
DDX56-210ENST00000479440 DMRT3Q9NQL9 472 aa14.98□□□□□ -0.01
DDX56-210ENST00000479440 CRIM1Q9NZV1 1036 aa14.98□□□□□ -0.01
DDX56-210ENST00000479440 SAMD15Q9P1V8 674 aa14.98□□□□□ -0.01
DDX56-210ENST00000479440 Q9UFV3 132 aa14.98□□□□□ -0.01
DDX56-210ENST00000479440 YARS2Q9Y2Z4 477 aaKnown RBP14.98□□□□□ -0.01
DDX56-210ENST00000479440 CTAGE9A4FU28 777 aa14.97□□□□□ -0.01
DDX56-210ENST00000479440 URADA6NGE7 173 aa14.97□□□□□ -0.01
DDX56-210ENST00000479440 A8MUA0 341 aa14.97□□□□□ -0.01
DDX56-210ENST00000479440 FAM171A2A8MVW0 826 aa14.97□□□□□ -0.01
DDX56-210ENST00000479440 AQP7O14520 342 aa14.97□□□□□ -0.01
DDX56-210ENST00000479440 FTCDO95954 541 aa14.97□□□□□ -0.01
DDX56-210ENST00000479440 IGHG3P01860 377 aa14.97□□□□□ -0.01
DDX56-210ENST00000479440 SERPIND1P05546 499 aa14.97□□□□□ -0.01
DDX56-210ENST00000479440 ZNF888P0CJ79 500 aaPredicted RBP14.97□□□□□ -0.01
DDX56-210ENST00000479440 RNH1P13489 461 aaKnown RBP14.97□□□□□ -0.01
DDX56-210ENST00000479440 CCR8P51685 355 aa14.97□□□□□ -0.01
DDX56-210ENST00000479440 BTG2P78543 158 aa14.97□□□□□ -0.01
DDX56-210ENST00000479440 KEAP1Q14145 624 aa14.97□□□□□ -0.01
DDX56-210ENST00000479440 DEFB113Q30KQ7 82 aa14.97□□□□□ -0.01
DDX56-210ENST00000479440 C1orf185Q5T7R7 199 aa14.97□□□□□ -0.01
DDX56-210ENST00000479440 WLSQ5T9L3 541 aa14.97□□□□□ -0.01
DDX56-210ENST00000479440 ARMC3Q5W041 872 aa14.97□□□□□ -0.01
DDX56-210ENST00000479440 FBXW10Q5XX13 1052 aa14.97□□□□□ -0.01
DDX56-210ENST00000479440 ZNF470Q6ECI4 717 aa14.97□□□□□ -0.01
DDX56-210ENST00000479440 C4orf22Q6V702 233 aa14.97□□□□□ -0.01
DDX56-210ENST00000479440 PIWIL4Q7Z3Z4 852 aaKnown RBP14.97□□□□□ -0.01
DDX56-210ENST00000479440 LIX1LQ8IVB5 337 aa14.97□□□□□ -0.01
DDX56-210ENST00000479440 CPNE9Q8IYJ1 553 aa14.97□□□□□ -0.01
DDX56-210ENST00000479440 NT5CQ8TCD5 201 aa14.97□□□□□ -0.01
DDX56-210ENST00000479440 CD200R1Q8TD46 325 aa14.97□□□□□ -0.01
DDX56-210ENST00000479440 FAM222BQ8WU58 562 aa14.97□□□□□ -0.01
DDX56-210ENST00000479440 ASB15Q8WXK1 588 aa14.97□□□□□ -0.01
DDX56-210ENST00000479440 ALKBH8Q96BT7 664 aaKnown RBP14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms