RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 CAPN13Q6MZZ7 669 aaPredicted RBP13.78□□□□□ -0.2
USP11-207ENST00000478596 AGTRAPQ6RW13 159 aa13.78□□□□□ -0.2
USP11-207ENST00000478596 SLC22A9Q8IVM8 553 aa13.78□□□□□ -0.2
USP11-207ENST00000478596 PDPRQ8NCN5 879 aa13.78□□□□□ -0.2
USP11-207ENST00000478596 OR2L8Q8NGY9 312 aa13.78□□□□□ -0.2
USP11-207ENST00000478596 DYDC1Q8WWB3 177 aa13.78□□□□□ -0.2
USP11-207ENST00000478596 SMPDL3AQ92484 453 aa13.78□□□□□ -0.2
USP11-207ENST00000478596 DLG3Q92796 817 aa13.78□□□□□ -0.2
USP11-207ENST00000478596 NACC2Q96BF6 587 aa13.78□□□□□ -0.2
USP11-207ENST00000478596 FBXL8Q96CD0 374 aa13.78□□□□□ -0.2
USP11-207ENST00000478596 PHF21BQ96EK2 531 aa13.78□□□□□ -0.2
USP11-207ENST00000478596 GPR78Q96P69 363 aa13.78□□□□□ -0.2
USP11-207ENST00000478596 TAAR6Q96RI8 345 aa13.78□□□□□ -0.2
USP11-207ENST00000478596 OR6C2Q9NZP2 312 aa13.78□□□□□ -0.2
USP11-207ENST00000478596 OPTCQ9UBM4 332 aa13.78□□□□□ -0.2
USP11-207ENST00000478596 PLLPQ9Y342 182 aa13.78□□□□□ -0.2
USP11-207ENST00000478596 PTRH2Q9Y3E5 179 aaKnown RBP13.78□□□□□ -0.2
USP11-207ENST00000478596 DYRK1BQ9Y463 629 aa13.78□□□□□ -0.2
USP11-207ENST00000478596 COL6A5A8TX70 2615 aa13.78□□□□□ -0.2
USP11-207ENST00000478596 CSPG4Q6UVK1 2322 aa13.78□□□□□ -0.2
USP11-207ENST00000478596 FLNAP21333 2647 aaKnown RBP13.77□□□□□ -0.2
USP11-207ENST00000478596 A8MT66 165 aa13.77□□□□□ -0.21
USP11-207ENST00000478596 PRPF4O43172 522 aaKnown RBP eCLIP13.77□□□□□ -0.219e-6■□□□□ 10.5
USP11-207ENST00000478596 CCNDBP1O95273 360 aa13.77□□□□□ -0.21
USP11-207ENST00000478596 CHRM5P08912 532 aaPredicted RBP13.77□□□□□ -0.21
USP11-207ENST00000478596 HBQ1P09105 142 aa13.77□□□□□ -0.21
USP11-207ENST00000478596 CPA3P15088 417 aa13.77□□□□□ -0.21
USP11-207ENST00000478596 CCND1P24385 295 aa13.77□□□□□ -0.21
USP11-207ENST00000478596 ATP5F1P24539 256 aaPredicted RBP13.77□□□□□ -0.21
USP11-207ENST00000478596 EEF1DP29692 281 aaKnown RBP13.77□□□□□ -0.21
USP11-207ENST00000478596 PRRC2AP48634 2157 aaKnown RBP13.77□□□□□ -0.21
USP11-207ENST00000478596 ALDH18A1P54886 795 aaKnown RBP13.77□□□□□ -0.21
USP11-207ENST00000478596 CASP6P55212 293 aa13.77□□□□□ -0.21
USP11-207ENST00000478596 FOXD4Q12950 439 aaPredicted RBP13.77□□□□□ -0.21
USP11-207ENST00000478596 NAE1Q13564 534 aa13.77□□□□□ -0.21
USP11-207ENST00000478596 PRAMEF13Q5VWM6 474 aa13.77□□□□□ -0.21
USP11-207ENST00000478596 SUSD1Q6UWL2 747 aa13.77□□□□□ -0.21
USP11-207ENST00000478596 ZYG11AQ6WRX3 759 aa13.77□□□□□ -0.21
USP11-207ENST00000478596 MEX3BQ6ZN04 569 aaKnown RBP13.77□□□□□ -0.21
USP11-207ENST00000478596 ADCK2Q7Z695 626 aa13.77□□□□□ -0.21
USP11-207ENST00000478596 CCNYL1Q8N7R7 359 aa13.77□□□□□ -0.21
USP11-207ENST00000478596 OR1L3Q8NH93 324 aa13.77□□□□□ -0.21
USP11-207ENST00000478596 ZNF480Q8WV37 535 aa13.77□□□□□ -0.21
USP11-207ENST00000478596 SLC22A18Q96BI1 424 aa13.77□□□□□ -0.21
USP11-207ENST00000478596 CCDC126Q96EE4 140 aa13.77□□□□□ -0.21
USP11-207ENST00000478596 ACAT2Q9BWD1 397 aa13.77□□□□□ -0.21
USP11-207ENST00000478596 HRASLS2Q9NWW9 162 aa13.77□□□□□ -0.21
USP11-207ENST00000478596 SOHLH2Q9NX45 425 aa13.77□□□□□ -0.21
USP11-207ENST00000478596 EMCNQ9ULC0 261 aa13.77□□□□□ -0.21
USP11-207ENST00000478596 SLC9B1P1A6NJY1 282 aa13.76□□□□□ -0.21
USP11-207ENST00000478596 MATN2O00339 956 aa13.76□□□□□ -0.21
USP11-207ENST00000478596 TYROBPO43914 113 aa13.76□□□□□ -0.21
USP11-207ENST00000478596 FASTKQ14296 549 aaKnown RBP13.76□□□□□ -0.21
USP11-207ENST00000478596 SETDB1Q15047 1291 aa13.76□□□□□ -0.21
USP11-207ENST00000478596 RBBP7Q16576 425 aa13.76□□□□□ -0.21
USP11-207ENST00000478596 TNFAIP8L3Q5GJ75 292 aa13.76□□□□□ -0.21
USP11-207ENST00000478596 IRAK1BP1Q5VVH5 260 aa13.76□□□□□ -0.21
USP11-207ENST00000478596 SH2D5Q6ZV89 423 aa13.76□□□□□ -0.21
USP11-207ENST00000478596 CXXC5Q7LFL8 322 aaKnown RBP13.76□□□□□ -0.21
USP11-207ENST00000478596 LRRC70Q7Z2Q7 622 aa13.76□□□□□ -0.21
USP11-207ENST00000478596 LMNTD1Q8N9Z9 388 aa13.76□□□□□ -0.21
USP11-207ENST00000478596 CATSPER1Q8NEC5 780 aa13.76□□□□□ -0.21
USP11-207ENST00000478596 ADAMTS18Q8TE60 1221 aa13.76□□□□□ -0.21
USP11-207ENST00000478596 DENND1AQ8TEH3 1009 aa13.76□□□□□ -0.21
USP11-207ENST00000478596 NINJ1Q92982 152 aa13.76□□□□□ -0.21
USP11-207ENST00000478596 PYCR2Q96C36 320 aa13.76□□□□□ -0.21
USP11-207ENST00000478596 RHBDF1Q96CC6 855 aa13.76□□□□□ -0.21
USP11-207ENST00000478596 MAGEB10Q96LZ2 347 aaPredicted RBP13.76□□□□□ -0.21
USP11-207ENST00000478596 NRTNQ99748 197 aa13.76□□□□□ -0.21
USP11-207ENST00000478596 ACTR10Q9NZ32 417 aa13.76□□□□□ -0.21
USP11-207ENST00000478596 TAC3Q9UHF0 121 aa13.76□□□□□ -0.21
USP11-207ENST00000478596 SH3BGRL2Q9UJC5 107 aa13.76□□□□□ -0.21
USP11-207ENST00000478596 TNPO3Q9Y5L0 923 aaKnown RBP13.76□□□□□ -0.21
USP11-207ENST00000478596 NCOA6Q14686 2063 aaPredicted RBP13.75□□□□□ -0.21
USP11-207ENST00000478596 WDR91A4D1P6 747 aa13.75□□□□□ -0.21
USP11-207ENST00000478596 KIAA1324LA8MWY0 1029 aaPredicted RBP13.75□□□□□ -0.21
USP11-207ENST00000478596 TMEM150CB9EJG8 249 aa13.75□□□□□ -0.21
USP11-207ENST00000478596 MAP3K7O43318 606 aa13.75□□□□□ -0.21
USP11-207ENST00000478596 STK16O75716 305 aa13.75□□□□□ -0.21
USP11-207ENST00000478596 UMODP07911 640 aa13.75□□□□□ -0.21
USP11-207ENST00000478596 ESRRAP11474 423 aaPredicted RBP13.75□□□□□ -0.21
USP11-207ENST00000478596 CDH3P22223 829 aa13.75□□□□□ -0.21
USP11-207ENST00000478596 PSMB5P28074 263 aa13.75□□□□□ -0.21
USP11-207ENST00000478596 CMPK1P30085 196 aa13.75□□□□□ -0.21
USP11-207ENST00000478596 PIK3CGP48736 1102 aa13.75□□□□□ -0.21
USP11-207ENST00000478596 RBPJQ06330 500 aa13.75□□□□□ -0.21
USP11-207ENST00000478596 GRB7Q14451 532 aa13.75□□□□□ -0.21
USP11-207ENST00000478596 KIR2DS3Q14952 304 aa13.75□□□□□ -0.21
USP11-207ENST00000478596 SF1Q15637 639 aaKnown RBP13.75□□□□□ -0.21
USP11-207ENST00000478596 PDK4Q16654 411 aa13.75□□□□□ -0.21
USP11-207ENST00000478596 C18orf21Q32NC0 220 aaPredicted RBP13.75□□□□□ -0.21
USP11-207ENST00000478596 CDKL4Q5MAI5 379 aa13.75□□□□□ -0.21
USP11-207ENST00000478596 MLIPQ5VWP3 458 aa13.75□□□□□ -0.21
USP11-207ENST00000478596 FAAH2Q6GMR7 532 aa13.75□□□□□ -0.21
USP11-207ENST00000478596 BIVMQ86UB2 503 aa13.75□□□□□ -0.21
USP11-207ENST00000478596 TRIM73Q86UV7 250 aa13.75□□□□□ -0.21
USP11-207ENST00000478596 C17orf64Q86WR6 236 aa13.75□□□□□ -0.21
USP11-207ENST00000478596 PRIMA1Q86XR5 153 aa13.75□□□□□ -0.21
USP11-207ENST00000478596 MYLK4Q86YV6 388 aaPredicted RBP13.75□□□□□ -0.21
USP11-207ENST00000478596 ARFGAP2Q8N6H7 521 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms