RNA–Protein interactions for RNA: ENST00000478288.5

ABCF3-212, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-212ENST00000478288 SRSF11Q05519 484 aaKnown RBP12.17□□□□□ -0.46
ABCF3-212ENST00000478288 PDAP1Q13442 181 aaKnown RBP12.17□□□□□ -0.46
ABCF3-212ENST00000478288 CSHL1Q14406 222 aa12.17□□□□□ -0.46
ABCF3-212ENST00000478288 BBS9Q3SYG4 887 aa12.17□□□□□ -0.46
ABCF3-212ENST00000478288 CHERPQ8IWX8 916 aaKnown RBP12.17□□□□□ -0.46
ABCF3-212ENST00000478288 TRPV3Q8NET8 790 aa12.17□□□□□ -0.46
ABCF3-212ENST00000478288 UTP15Q8TED0 518 aaKnown RBP12.17□□□□□ -0.46
ABCF3-212ENST00000478288 ANKRD7Q92527 254 aa12.17□□□□□ -0.46
ABCF3-212ENST00000478288 NEIL2Q969S2 332 aa12.17□□□□□ -0.46
ABCF3-212ENST00000478288 ALKBH8Q96BT7 664 aaKnown RBP12.17□□□□□ -0.46
ABCF3-212ENST00000478288 PYCR2Q96C36 320 aa12.17□□□□□ -0.46
ABCF3-212ENST00000478288 MTFMTQ96DP5 389 aaKnown RBP12.17□□□□□ -0.46
ABCF3-212ENST00000478288 C14orf79Q96F83 325 aa12.17□□□□□ -0.46
ABCF3-212ENST00000478288 SMIM10Q96HG1 83 aa12.17□□□□□ -0.46
ABCF3-212ENST00000478288 SPOCK3Q9BQ16 436 aa12.17□□□□□ -0.46
ABCF3-212ENST00000478288 VKORC1Q9BQB6 163 aa12.17□□□□□ -0.46
ABCF3-212ENST00000478288 CDCP1Q9H5V8 836 aa12.17□□□□□ -0.46
ABCF3-212ENST00000478288 PELI2Q9HAT8 420 aa12.17□□□□□ -0.46
ABCF3-212ENST00000478288 PRDM9Q9NQV7 894 aa12.17□□□□□ -0.46
ABCF3-212ENST00000478288 NPIPA1Q9UND3 350 aa12.17□□□□□ -0.46
ABCF3-212ENST00000478288 SYNDIG1LA6NDD5 238 aa12.16□□□□□ -0.46
ABCF3-212ENST00000478288 CES2O00748 559 aa12.16□□□□□ -0.46
ABCF3-212ENST00000478288 FCHO1O14526 889 aa12.16□□□□□ -0.46
ABCF3-212ENST00000478288 DNALI1O14645 258 aaPredicted RBP12.16□□□□□ -0.46
ABCF3-212ENST00000478288 SERPINA6P08185 405 aa12.16□□□□□ -0.46
ABCF3-212ENST00000478288 RNH1P13489 461 aaKnown RBP12.16□□□□□ -0.46
ABCF3-212ENST00000478288 ABOP16442 354 aa12.16□□□□□ -0.46
ABCF3-212ENST00000478288 HLCSP50747 726 aa12.16□□□□□ -0.46
ABCF3-212ENST00000478288 FRG1Q14331 258 aaKnown RBP12.16□□□□□ -0.46
ABCF3-212ENST00000478288 PPP1R7Q15435 360 aa12.16□□□□□ -0.46
ABCF3-212ENST00000478288 MAPKAPK3Q16644 382 aa12.16□□□□□ -0.46
ABCF3-212ENST00000478288 PPP1R3AQ16821 1122 aa12.16□□□□□ -0.46
ABCF3-212ENST00000478288 CATSPEREQ5SY80 951 aa12.16□□□□□ -0.46
ABCF3-212ENST00000478288 ZNF468Q5VIY5 522 aaPredicted RBP12.16□□□□□ -0.46
ABCF3-212ENST00000478288 FAM45BPQ6NSW5 357 aa12.16□□□□□ -0.46
ABCF3-212ENST00000478288 SBSNQ6UWP8 590 aa12.16□□□□□ -0.46
ABCF3-212ENST00000478288 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.16□□□□□ -0.46
ABCF3-212ENST00000478288 ZNF227Q86WZ6 799 aa12.16□□□□□ -0.46
ABCF3-212ENST00000478288 ZNF295-AS1Q8N0V1 137 aa12.16□□□□□ -0.46
ABCF3-212ENST00000478288 KIF2BQ8N4N8 673 aa12.16□□□□□ -0.46
ABCF3-212ENST00000478288 ARMC2Q8NEN0 867 aa12.16□□□□□ -0.46
ABCF3-212ENST00000478288 NFAM1Q8NET5 270 aaPredicted RBP12.16□□□□□ -0.46
ABCF3-212ENST00000478288 FAM45AQ8TCE6 357 aa12.16□□□□□ -0.46
ABCF3-212ENST00000478288 TMEM125Q96AQ2 219 aa12.16□□□□□ -0.46
ABCF3-212ENST00000478288 SEC16BQ96JE7 1060 aa12.16□□□□□ -0.46
ABCF3-212ENST00000478288 PTCHD1Q96NR3 888 aa12.16□□□□□ -0.46
ABCF3-212ENST00000478288 DMRTA2Q96SC8 542 aa12.16□□□□□ -0.46
ABCF3-212ENST00000478288 TREX2Q9BQ50 279 aaPredicted RBP12.16□□□□□ -0.46
ABCF3-212ENST00000478288 AIF1LQ9BQI0 150 aa12.16□□□□□ -0.46
ABCF3-212ENST00000478288 TSPAN10Q9H1Z9 355 aaPredicted RBP12.16□□□□□ -0.46
ABCF3-212ENST00000478288 PPIEQ9UNP9 301 aaKnown RBP12.16□□□□□ -0.46
ABCF3-212ENST00000478288 VWA7Q9Y334 891 aa12.16□□□□□ -0.46
ABCF3-212ENST00000478288 MMACHCQ9Y4U1 282 aa12.16□□□□□ -0.46
ABCF3-212ENST00000478288 ASB1Q9Y576 335 aa12.16□□□□□ -0.46
ABCF3-212ENST00000478288 NF1P21359 2839 aa12.16□□□□□ -0.46
ABCF3-212ENST00000478288 ITPR3Q14573 2671 aa12.15□□□□□ -0.46
ABCF3-212ENST00000478288 HCFC1P51610 2035 aa12.15□□□□□ -0.46
ABCF3-212ENST00000478288 PSMD12O00232 456 aaPredicted RBP12.15□□□□□ -0.46
ABCF3-212ENST00000478288 PRRG2O14669 202 aa12.15□□□□□ -0.46
ABCF3-212ENST00000478288 B4GALT2O60909 372 aa12.15□□□□□ -0.46
ABCF3-212ENST00000478288 ZNF37AP17032 561 aaPredicted RBP12.15□□□□□ -0.46
ABCF3-212ENST00000478288 CAPN3P20807 821 aa12.15□□□□□ -0.46
ABCF3-212ENST00000478288 GSTM2P28161 218 aa12.15□□□□□ -0.46
ABCF3-212ENST00000478288 HNMTP50135 292 aa12.15□□□□□ -0.46
ABCF3-212ENST00000478288 OLR1P78380 273 aa12.15□□□□□ -0.46
ABCF3-212ENST00000478288 CDKL1Q00532 357 aa12.15□□□□□ -0.46
ABCF3-212ENST00000478288 HYAL2Q12891 473 aa12.15□□□□□ -0.46
ABCF3-212ENST00000478288 RNFT1Q5M7Z0 435 aa12.15□□□□□ -0.46
ABCF3-212ENST00000478288 TEDDM1Q5T9Z0 273 aa12.15□□□□□ -0.46
ABCF3-212ENST00000478288 HECTD2Q5U5R9 776 aa12.15□□□□□ -0.46
ABCF3-212ENST00000478288 DOLPP1Q86YN1 238 aa12.15□□□□□ -0.46
ABCF3-212ENST00000478288 CPSF7Q8N684 471 aaKnown RBP12.15□□□□□ -0.46
ABCF3-212ENST00000478288 ANKRD53Q8N9V6 530 aa12.15□□□□□ -0.46
ABCF3-212ENST00000478288 APCDD1LQ8NCL9 501 aa12.15□□□□□ -0.46
ABCF3-212ENST00000478288 AGAP11Q8TF27 550 aa12.15□□□□□ -0.46
ABCF3-212ENST00000478288 LRRC39Q96DD0 335 aa12.15□□□□□ -0.46
ABCF3-212ENST00000478288 OSBPL9Q96SU4 736 aa12.15□□□□□ -0.46
ABCF3-212ENST00000478288 SPNS1Q9H2V7 528 aa12.15□□□□□ -0.46
ABCF3-212ENST00000478288 PLAC1Q9HBJ0 212 aa12.15□□□□□ -0.46
ABCF3-212ENST00000478288 KLF13Q9Y2Y9 288 aaPredicted RBP12.15□□□□□ -0.46
ABCF3-212ENST00000478288 DYRK1BQ9Y463 629 aa12.15□□□□□ -0.46
ABCF3-212ENST00000478288 KCNE2Q9Y6J6 123 aa12.15□□□□□ -0.46
ABCF3-212ENST00000478288 AKAP6Q13023 2319 aa12.14□□□□□ -0.47
ABCF3-212ENST00000478288 ADAM10O14672 748 aa12.14□□□□□ -0.47
ABCF3-212ENST00000478288 DNAJB6O75190 326 aa12.14□□□□□ -0.47
ABCF3-212ENST00000478288 GUCA1CO95843 209 aa12.14□□□□□ -0.47
ABCF3-212ENST00000478288 TFEBP19484 476 aa12.14□□□□□ -0.47
ABCF3-212ENST00000478288 MAOAP21397 527 aa12.14□□□□□ -0.47
ABCF3-212ENST00000478288 CLCN2P51788 898 aa12.14□□□□□ -0.47
ABCF3-212ENST00000478288 ITGA8P53708 1063 aa12.14□□□□□ -0.47
ABCF3-212ENST00000478288 RIPPLY3P57055 190 aa12.14□□□□□ -0.47
ABCF3-212ENST00000478288 CDSNQ15517 529 aa12.14□□□□□ -0.47
ABCF3-212ENST00000478288 MSS51Q4VC12 460 aa12.14□□□□□ -0.47
ABCF3-212ENST00000478288 STEAP4Q687X5 459 aa12.14□□□□□ -0.47
ABCF3-212ENST00000478288 NXPE4Q6UWF7 544 aa12.14□□□□□ -0.47
ABCF3-212ENST00000478288 THOC6Q86W42 341 aaKnown RBP12.14□□□□□ -0.47
ABCF3-212ENST00000478288 KLHDC8AQ8IYD2 350 aa12.14□□□□□ -0.47
ABCF3-212ENST00000478288 PDIK1LQ8N165 341 aa12.14□□□□□ -0.47
ABCF3-212ENST00000478288 ZFP62Q8NB50 900 aaPredicted RBP12.14□□□□□ -0.47
ABCF3-212ENST00000478288 B3GNT7Q8NFL0 401 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms