RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 VPS4BO75351 444 aa15.38■□□□□ 0.05
VHL-203ENST00000477538 MED26O95402 600 aa15.38■□□□□ 0.05
VHL-203ENST00000477538 SMIM10L1P0DMW3 83 aa15.38■□□□□ 0.05
VHL-203ENST00000477538 ALOX12P18054 663 aa15.38■□□□□ 0.05
VHL-203ENST00000477538 IL1RNP18510 177 aa15.38■□□□□ 0.05
VHL-203ENST00000477538 DRD4P21917 467 aa15.38■□□□□ 0.05
VHL-203ENST00000477538 PRPH2P23942 346 aa15.38■□□□□ 0.05
VHL-203ENST00000477538 ARFIP1P53367 373 aa15.38■□□□□ 0.05
VHL-203ENST00000477538 SNRPNP63162 240 aaKnown RBP15.38■□□□□ 0.05
VHL-203ENST00000477538 ACSM2AQ08AH3 577 aa15.38■□□□□ 0.05
VHL-203ENST00000477538 TBL3Q12788 808 aaKnown RBP15.38■□□□□ 0.05
VHL-203ENST00000477538 COL9A2Q14055 689 aaPredicted RBP15.38■□□□□ 0.05
VHL-203ENST00000477538 HERC3Q15034 1050 aa15.38■□□□□ 0.05
VHL-203ENST00000477538 GALNTL6Q49A17 601 aa15.38■□□□□ 0.05
VHL-203ENST00000477538 SLC9B1Q4ZJI4 515 aa15.38■□□□□ 0.05
VHL-203ENST00000477538 SPIN4Q56A73 249 aa15.38■□□□□ 0.05
VHL-203ENST00000477538 ACSM2BQ68CK6 577 aa15.38■□□□□ 0.05
VHL-203ENST00000477538 ABHD17CQ6PCB6 329 aa15.38■□□□□ 0.05
VHL-203ENST00000477538 EPGNQ6UW88 154 aa15.38■□□□□ 0.05
VHL-203ENST00000477538 UBE3DQ7Z6J8 389 aa15.38■□□□□ 0.05
VHL-203ENST00000477538 METTL4Q8N3J2 472 aa15.38■□□□□ 0.05
VHL-203ENST00000477538 RFWD2Q8NHY2 731 aa15.38■□□□□ 0.05
VHL-203ENST00000477538 PMEPA1Q969W9 287 aa15.38■□□□□ 0.05
VHL-203ENST00000477538 APIPQ96GX9 242 aa15.38■□□□□ 0.05
VHL-203ENST00000477538 SMIM10Q96HG1 83 aa15.38■□□□□ 0.05
VHL-203ENST00000477538 PPP3R2Q96LZ3 170 aa15.38■□□□□ 0.05
VHL-203ENST00000477538 KCNC2Q96PR1 638 aa15.38■□□□□ 0.05
VHL-203ENST00000477538 DDA1Q9BW61 102 aa15.38■□□□□ 0.05
VHL-203ENST00000477538 ACTR5Q9H9F9 607 aaPredicted RBP15.38■□□□□ 0.05
VHL-203ENST00000477538 LRTM1Q9HBL6 345 aa15.38■□□□□ 0.05
VHL-203ENST00000477538 C1orf109Q9NX04 203 aa15.38■□□□□ 0.05
VHL-203ENST00000477538 AHSPQ9NZD4 102 aa15.38■□□□□ 0.05
VHL-203ENST00000477538 GIMAP2Q9UG22 337 aa15.38■□□□□ 0.05
VHL-203ENST00000477538 DCTN4Q9UJW0 460 aa15.38■□□□□ 0.05
VHL-203ENST00000477538 PCDHB3Q9Y5E6 796 aa15.38■□□□□ 0.05
VHL-203ENST00000477538 B3GALT1Q9Y5Z6 326 aa15.38■□□□□ 0.05
VHL-203ENST00000477538 A0A088AWK7 358 aa15.37■□□□□ 0.05
VHL-203ENST00000477538 SRRM3A6NNA2 597 aaPredicted RBP15.37■□□□□ 0.05
VHL-203ENST00000477538 RTCAO00442 366 aaKnown RBP15.37■□□□□ 0.05
VHL-203ENST00000477538 DSCR3O14972 297 aa15.37■□□□□ 0.05
VHL-203ENST00000477538 PEX11AO75192 247 aa15.37■□□□□ 0.05
VHL-203ENST00000477538 SEC22BO75396 215 aa15.37■□□□□ 0.05
VHL-203ENST00000477538 ZNF10P21506 573 aaPredicted RBP15.37■□□□□ 0.05
VHL-203ENST00000477538 EPHA3P29320 983 aa15.37■□□□□ 0.05
VHL-203ENST00000477538 SSR2P43308 183 aa15.37■□□□□ 0.05
VHL-203ENST00000477538 ID4P47928 161 aa15.37■□□□□ 0.05
VHL-203ENST00000477538 GABREP78334 506 aa15.37■□□□□ 0.05
VHL-203ENST00000477538 FOXC1Q12948 553 aa15.37■□□□□ 0.05
VHL-203ENST00000477538 FAM53BQ14153 422 aa15.37■□□□□ 0.05
VHL-203ENST00000477538 AP5B1Q2VPB7 878 aa15.37■□□□□ 0.05
VHL-203ENST00000477538 DEFB134Q4QY38 66 aa15.37■□□□□ 0.05
VHL-203ENST00000477538 ATP6AP1LQ52LC2 224 aa15.37■□□□□ 0.05
VHL-203ENST00000477538 OR4C11Q6IEV9 310 aa15.37■□□□□ 0.05
VHL-203ENST00000477538 TTLL10Q6ZVT0 673 aa15.37■□□□□ 0.05
VHL-203ENST00000477538 PRSS41Q7RTY9 318 aa15.37■□□□□ 0.05
VHL-203ENST00000477538 CPLX4Q7Z7G2 160 aa15.37■□□□□ 0.05
VHL-203ENST00000477538 ZFAND4Q86XD8 727 aa15.37■□□□□ 0.05
VHL-203ENST00000477538 C1orf52Q8N6N3 182 aaKnown RBP15.37■□□□□ 0.05
VHL-203ENST00000477538 CHTF18Q8WVB6 975 aa15.37■□□□□ 0.05
VHL-203ENST00000477538 RNF31Q96EP0 1072 aa15.37■□□□□ 0.05
VHL-203ENST00000477538 METTL2AQ96IZ6 378 aaKnown RBP15.37■□□□□ 0.05
VHL-203ENST00000477538 MAELQ96JY0 434 aaKnown RBP15.37■□□□□ 0.05
VHL-203ENST00000477538 TEFMQ96QE5 360 aaKnown RBP15.37■□□□□ 0.05
VHL-203ENST00000477538 EBF4Q9BQW3 602 aa15.37■□□□□ 0.05
VHL-203ENST00000477538 ZPBPQ9BS86 351 aa15.37■□□□□ 0.05
VHL-203ENST00000477538 TBCDQ9BTW9 1192 aa15.37■□□□□ 0.05
VHL-203ENST00000477538 SORBS1Q9BX66 1292 aaKnown RBP15.37■□□□□ 0.05
VHL-203ENST00000477538 ZNF717Q9BY31 904 aaPredicted RBP15.37■□□□□ 0.05
VHL-203ENST00000477538 ASPSCR1Q9BZE9 553 aa15.37■□□□□ 0.05
VHL-203ENST00000477538 EPN3Q9H201 632 aa15.37■□□□□ 0.05
VHL-203ENST00000477538 WDR55Q9H6Y2 383 aaPredicted RBP15.37■□□□□ 0.05
VHL-203ENST00000477538 AKTIPQ9H8T0 292 aa15.37■□□□□ 0.05
VHL-203ENST00000477538 COPS7BQ9H9Q2 264 aaPredicted RBP15.37■□□□□ 0.05
VHL-203ENST00000477538 POLR1BQ9H9Y6 1135 aa15.37■□□□□ 0.05
VHL-203ENST00000477538 ANKHQ9HCJ1 492 aa15.37■□□□□ 0.05
VHL-203ENST00000477538 PRDM7Q9NQW5 492 aa15.37■□□□□ 0.05
VHL-203ENST00000477538 TXLNGQ9NUQ3 528 aa15.37■□□□□ 0.05
VHL-203ENST00000477538 KLHL14Q9P2G3 628 aa15.37■□□□□ 0.05
VHL-203ENST00000477538 DHCR7Q9UBM7 475 aaKnown RBP15.37■□□□□ 0.05
VHL-203ENST00000477538 NDOR1Q9UHB4 597 aa15.37■□□□□ 0.05
VHL-203ENST00000477538 PCDHGA8Q9Y5G5 932 aa15.37■□□□□ 0.05
VHL-203ENST00000477538 A0A0A6YYC8 382 aaPredicted RBP15.36■□□□□ 0.05
VHL-203ENST00000477538 A0A0G2JND7 137 aa15.36■□□□□ 0.05
VHL-203ENST00000477538 I3L1I5 382 aaPredicted RBP15.36■□□□□ 0.05
VHL-203ENST00000477538 GALR3O60755 368 aaPredicted RBP15.36■□□□□ 0.05
VHL-203ENST00000477538 CPNE3O75131 537 aaKnown RBP15.36■□□□□ 0.05
VHL-203ENST00000477538 KLHL18O94889 574 aa15.36■□□□□ 0.05
VHL-203ENST00000477538 TNFSF15O95150 251 aa15.36■□□□□ 0.05
VHL-203ENST00000477538 B3GALT4O96024 378 aa15.36■□□□□ 0.05
VHL-203ENST00000477538 HBQ1P09105 142 aa15.36■□□□□ 0.05
VHL-203ENST00000477538 ALAS2P22557 587 aa15.36■□□□□ 0.05
VHL-203ENST00000477538 BSGP35613 385 aa15.36■□□□□ 0.05
VHL-203ENST00000477538 TSFMP43897 325 aaKnown RBP15.36■□□□□ 0.05
VHL-203ENST00000477538 IDH3AP50213 366 aa15.36■□□□□ 0.05
VHL-203ENST00000477538 RPL38P63173 70 aaKnown RBP15.36■□□□□ 0.05
VHL-203ENST00000477538 SKP1P63208 163 aa15.36■□□□□ 0.05
VHL-203ENST00000477538 BTN3A2P78410 334 aa15.36■□□□□ 0.05
VHL-203ENST00000477538 SF3A3Q12874 501 aaKnown RBP eCLIP15.36■□□□□ 0.053e-11■■■■■ 32.8
VHL-203ENST00000477538 C6orf136Q5SQH8 315 aa15.36■□□□□ 0.05
VHL-203ENST00000477538 TMEM164Q5U3C3 297 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms