RNA–Protein interactions for RNA: ENST00000477200.1

PIKFYVE-209, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 3

Gene PIKFYVE, Length 636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-209ENST00000477200 STX4Q12846 297 aa4.28□□□□□ -1.72
PIKFYVE-209ENST00000477200 EPS8Q12929 822 aa4.28□□□□□ -1.72
PIKFYVE-209ENST00000477200 NME3Q13232 169 aa4.28□□□□□ -1.72
PIKFYVE-209ENST00000477200 DMP1Q13316 513 aaPredicted RBP4.28□□□□□ -1.72
PIKFYVE-209ENST00000477200 RAPSNQ13702 412 aa4.28□□□□□ -1.72
PIKFYVE-209ENST00000477200 DOC2AQ14183 400 aa4.28□□□□□ -1.72
PIKFYVE-209ENST00000477200 FLOT2Q14254 428 aa4.28□□□□□ -1.72
PIKFYVE-209ENST00000477200 GK3PQ14409 553 aa4.28□□□□□ -1.72
PIKFYVE-209ENST00000477200 MXD4Q14582 209 aaPredicted RBP4.28□□□□□ -1.72
PIKFYVE-209ENST00000477200 ZNF267Q14586 743 aaPredicted RBP4.28□□□□□ -1.72
PIKFYVE-209ENST00000477200 SLC1A5Q15758 541 aa4.28□□□□□ -1.72
PIKFYVE-209ENST00000477200 GRK1Q15835 563 aa4.28□□□□□ -1.72
PIKFYVE-209ENST00000477200 CA9Q16790 459 aa4.28□□□□□ -1.72
PIKFYVE-209ENST00000477200 DUSP6Q16828 381 aa4.28□□□□□ -1.72
PIKFYVE-209ENST00000477200 MTHFSDQ2M296 383 aaKnown RBP4.28□□□□□ -1.72
PIKFYVE-209ENST00000477200 EPC2Q52LR7 807 aa4.28□□□□□ -1.72
PIKFYVE-209ENST00000477200 GPAT3Q53EU6 434 aa4.28□□□□□ -1.72
PIKFYVE-209ENST00000477200 RBM48Q5RL73 367 aaKnown RBP4.28□□□□□ -1.72
PIKFYVE-209ENST00000477200 SAPCD1Q5SSQ6 148 aa4.28□□□□□ -1.72
PIKFYVE-209ENST00000477200 THEM4Q5T1C6 240 aa4.28□□□□□ -1.72
PIKFYVE-209ENST00000477200 IFIT1BQ5T764 474 aaKnown RBP4.28□□□□□ -1.72
PIKFYVE-209ENST00000477200 C11orf63Q6NUN7 778 aa4.28□□□□□ -1.72
PIKFYVE-209ENST00000477200 ERICH5Q6P6B1 374 aa4.28□□□□□ -1.72
PIKFYVE-209ENST00000477200 OVCH2Q7RTZ1 564 aa4.28□□□□□ -1.72
PIKFYVE-209ENST00000477200 GALNT10Q86SR1 603 aa4.28□□□□□ -1.72
PIKFYVE-209ENST00000477200 AACSQ86V21 672 aa4.28□□□□□ -1.72
PIKFYVE-209ENST00000477200 HIPK1Q86Z02 1210 aa4.28□□□□□ -1.72
PIKFYVE-209ENST00000477200 CRLF3Q8IUI8 442 aa4.28□□□□□ -1.72
PIKFYVE-209ENST00000477200 SLC22A9Q8IVM8 553 aa4.28□□□□□ -1.72
PIKFYVE-209ENST00000477200 CDKL3Q8IVW4 592 aaPredicted RBP4.28□□□□□ -1.72
PIKFYVE-209ENST00000477200 PHC2Q8IXK0 858 aa4.28□□□□□ -1.72
PIKFYVE-209ENST00000477200 CYP4Z2PQ8N1L4 340 aa4.28□□□□□ -1.72
PIKFYVE-209ENST00000477200 ZNF786Q8N393 782 aa4.28□□□□□ -1.72
PIKFYVE-209ENST00000477200 SLC25A41Q8N5S1 370 aa4.28□□□□□ -1.72
PIKFYVE-209ENST00000477200 EIF4E3Q8N5X7 224 aaKnown RBP4.28□□□□□ -1.72
PIKFYVE-209ENST00000477200 EMC1Q8N766 993 aa4.28□□□□□ -1.72
PIKFYVE-209ENST00000477200 PRELID2Q8N945 189 aa4.28□□□□□ -1.72
PIKFYVE-209ENST00000477200 FAM47BQ8NA70 645 aa4.28□□□□□ -1.72
PIKFYVE-209ENST00000477200 ELP5Q8TE02 316 aa4.28□□□□□ -1.72
PIKFYVE-209ENST00000477200 HEXDCQ8WVB3 486 aa4.28□□□□□ -1.72
PIKFYVE-209ENST00000477200 DEDD2Q8WXF8 326 aa4.28□□□□□ -1.72
PIKFYVE-209ENST00000477200 SLC7A6Q92536 515 aa4.28□□□□□ -1.72
PIKFYVE-209ENST00000477200 KIAA1191Q96A73 305 aa4.28□□□□□ -1.72
PIKFYVE-209ENST00000477200 TRIM43Q96BQ3 446 aaPredicted RBP4.28□□□□□ -1.72
PIKFYVE-209ENST00000477200 PGAP3Q96FM1 320 aaPredicted RBP4.28□□□□□ -1.72
PIKFYVE-209ENST00000477200 ELMO2Q96JJ3 720 aa4.28□□□□□ -1.72
PIKFYVE-209ENST00000477200 C9orf72Q96LT7 481 aa4.28□□□□□ -1.72
PIKFYVE-209ENST00000477200 C10orf90Q96M02 699 aa4.28□□□□□ -1.72
PIKFYVE-209ENST00000477200 OR5M11Q96RB7 305 aa4.28□□□□□ -1.72
PIKFYVE-209ENST00000477200 KCTD14Q9BQ13 255 aaPredicted RBP4.28□□□□□ -1.72
PIKFYVE-209ENST00000477200 LBHD1Q9BQE6 289 aaPredicted RBP4.28□□□□□ -1.72
PIKFYVE-209ENST00000477200 TRIM62Q9BVG3 475 aa4.28□□□□□ -1.72
PIKFYVE-209ENST00000477200 GSDMCQ9BYG8 508 aa4.28□□□□□ -1.72
PIKFYVE-209ENST00000477200 SLC22A4Q9H015 551 aa4.28□□□□□ -1.72
PIKFYVE-209ENST00000477200 SHARPINQ9H0F6 387 aa4.28□□□□□ -1.72
PIKFYVE-209ENST00000477200 CCDC8Q9H0W5 538 aaPredicted RBP4.28□□□□□ -1.72
PIKFYVE-209ENST00000477200 SPNS1Q9H2V7 528 aa4.28□□□□□ -1.72
PIKFYVE-209ENST00000477200 RANBP3Q9H6Z4 567 aaPredicted RBP4.28□□□□□ -1.72
PIKFYVE-209ENST00000477200 CATSPERBQ9H7T0 1116 aa4.28□□□□□ -1.72
PIKFYVE-209ENST00000477200 GSN-AS1Q9NRJ2 163 aa4.28□□□□□ -1.72
PIKFYVE-209ENST00000477200 SNX15Q9NRS6 342 aa4.28□□□□□ -1.72
PIKFYVE-209ENST00000477200 ABCC13Q9NSE7 274 aa4.28□□□□□ -1.72
PIKFYVE-209ENST00000477200 C19orf12Q9NSK7 152 aa4.28□□□□□ -1.72
PIKFYVE-209ENST00000477200 DNAJC11Q9NVH1 559 aa4.28□□□□□ -1.72
PIKFYVE-209ENST00000477200 GDE1Q9NZC3 331 aa4.28□□□□□ -1.72
PIKFYVE-209ENST00000477200 ZNF224Q9NZL3 707 aa4.28□□□□□ -1.72
PIKFYVE-209ENST00000477200 OR6C2Q9NZP2 312 aa4.28□□□□□ -1.72
PIKFYVE-209ENST00000477200 SRP68Q9UHB9 627 aaKnown RBP4.28□□□□□ -1.72
PIKFYVE-209ENST00000477200 SH3BGRL2Q9UJC5 107 aa4.28□□□□□ -1.72
PIKFYVE-209ENST00000477200 ELF5Q9UKW6 265 aaPredicted RBP4.28□□□□□ -1.72
PIKFYVE-209ENST00000477200 TRPC5Q9UL62 973 aaPredicted RBP4.28□□□□□ -1.72
PIKFYVE-209ENST00000477200 BAIAP2Q9UQB8 552 aa4.28□□□□□ -1.72
PIKFYVE-209ENST00000477200 KLHL20Q9Y2M5 609 aa4.28□□□□□ -1.72
PIKFYVE-209ENST00000477200 PCDHGB5Q9Y5G0 923 aa4.28□□□□□ -1.72
PIKFYVE-209ENST00000477200 PCDHGB2Q9Y5G2 931 aa4.28□□□□□ -1.72
PIKFYVE-209ENST00000477200 PCDHA1Q9Y5I3 950 aa4.28□□□□□ -1.72
PIKFYVE-209ENST00000477200 MAGED1Q9Y5V3 778 aaPredicted RBP4.28□□□□□ -1.72
PIKFYVE-209ENST00000477200 MARF1Q9Y4F3 1742 aaKnown RBP4.28□□□□□ -1.72
PIKFYVE-209ENST00000477200 LMTK3Q96Q04 1460 aa4.28□□□□□ -1.72
PIKFYVE-209ENST00000477200 ZNF609O15014 1411 aa4.28□□□□□ -1.72
PIKFYVE-209ENST00000477200 CRB1P82279 1406 aa4.28□□□□□ -1.72
PIKFYVE-209ENST00000477200 RIC1Q4ADV7 1423 aa4.28□□□□□ -1.72
PIKFYVE-209ENST00000477200 TNRQ92752 1358 aa4.27□□□□□ -1.73
PIKFYVE-209ENST00000477200 ZNF142P52746 1687 aaPredicted RBP4.27□□□□□ -1.73
PIKFYVE-209ENST00000477200 PTPRMP28827 1452 aa4.27□□□□□ -1.73
PIKFYVE-209ENST00000477200 A0A087X0T9 212 aa4.27□□□□□ -1.73
PIKFYVE-209ENST00000477200 E2F8A0AVK6 867 aa4.27□□□□□ -1.73
PIKFYVE-209ENST00000477200 HACD1B0YJ81 288 aa4.27□□□□□ -1.73
PIKFYVE-209ENST00000477200 H0YAE9 185 aa4.27□□□□□ -1.73
PIKFYVE-209ENST00000477200 PDHXO00330 501 aa4.27□□□□□ -1.73
PIKFYVE-209ENST00000477200 SYN3O14994 580 aa4.27□□□□□ -1.73
PIKFYVE-209ENST00000477200 NUPL2O15504 423 aaKnown RBP4.27□□□□□ -1.73
PIKFYVE-209ENST00000477200 TBC1D4O60343 1298 aa4.27□□□□□ -1.73
PIKFYVE-209ENST00000477200 MRPS14O60783 128 aaKnown RBP4.27□□□□□ -1.73
PIKFYVE-209ENST00000477200 NDUFS6O75380 124 aaKnown RBP4.27□□□□□ -1.73
PIKFYVE-209ENST00000477200 OR2B3O76000 313 aa4.27□□□□□ -1.73
PIKFYVE-209ENST00000477200 INMTO95050 263 aa4.27□□□□□ -1.73
PIKFYVE-209ENST00000477200 SEC24AO95486 1093 aa4.27□□□□□ -1.73
PIKFYVE-209ENST00000477200 MT-CO3P00414 261 aa4.27□□□□□ -1.73
PIKFYVE-209ENST00000477200 PLGP00747 810 aaPredicted RBP4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms