RNA–Protein interactions for RNA: ENST00000475795.5

UBE4B-208, Transcript of ubiquitination factor E4B, humanhuman

TSL 5

Gene UBE4B, Length 871 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-208ENST00000475795 SP1P08047 785 aa6.75□□□□□ -1.33
UBE4B-208ENST00000475795 HIST1H2AGP0C0S8 130 aaPredicted RBP6.75□□□□□ -1.33
UBE4B-208ENST00000475795 ABOP16442 354 aa6.75□□□□□ -1.33
UBE4B-208ENST00000475795 ALOX12P18054 663 aa6.75□□□□□ -1.33
UBE4B-208ENST00000475795 PGAM1P18669 254 aa6.75□□□□□ -1.33
UBE4B-208ENST00000475795 HIST1H2ADP20671 130 aa6.75□□□□□ -1.33
UBE4B-208ENST00000475795 NME2P22392 152 aa6.75□□□□□ -1.33
UBE4B-208ENST00000475795 JAK1P23458 1154 aa6.75□□□□□ -1.33
UBE4B-208ENST00000475795 GABRB3P28472 473 aa6.75□□□□□ -1.33
UBE4B-208ENST00000475795 TPP2P29144 1249 aaPredicted RBP6.75□□□□□ -1.33
UBE4B-208ENST00000475795 SCTRP47872 440 aa6.75□□□□□ -1.33
UBE4B-208ENST00000475795 CCR8P51685 355 aa6.75□□□□□ -1.33
UBE4B-208ENST00000475795 CDKN2DP55273 166 aa6.75□□□□□ -1.33
UBE4B-208ENST00000475795 AP1S2P56377 157 aa6.75□□□□□ -1.33
UBE4B-208ENST00000475795 SKP1P63208 163 aa6.75□□□□□ -1.33
UBE4B-208ENST00000475795 MEF2AQ02078 507 aaPredicted RBP6.75□□□□□ -1.33
UBE4B-208ENST00000475795 OC90Q02509 493 aaPredicted RBP6.75□□□□□ -1.33
UBE4B-208ENST00000475795 RGS1Q08116 209 aa6.75□□□□□ -1.33
UBE4B-208ENST00000475795 CRYMQ14894 314 aa6.75□□□□□ -1.33
UBE4B-208ENST00000475795 CDSNQ15517 529 aa6.75□□□□□ -1.33
UBE4B-208ENST00000475795 DEFB134Q4QY38 66 aa6.75□□□□□ -1.33
UBE4B-208ENST00000475795 RBM20Q5T481 1227 aaKnown RBP6.75□□□□□ -1.33
UBE4B-208ENST00000475795 RNASEH2BQ5TBB1 312 aaKnown RBP6.75□□□□□ -1.33
UBE4B-208ENST00000475795 ZNF468Q5VIY5 522 aaPredicted RBP6.75□□□□□ -1.33
UBE4B-208ENST00000475795 DUPD1Q68J44 220 aa6.75□□□□□ -1.33
UBE4B-208ENST00000475795 NIPAL1Q6NVV3 410 aa6.75□□□□□ -1.33
UBE4B-208ENST00000475795 CCDC137Q6PK04 289 aaKnown RBP6.75□□□□□ -1.33
UBE4B-208ENST00000475795 QSOX2Q6ZRP7 698 aa6.75□□□□□ -1.33
UBE4B-208ENST00000475795 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.75□□□□□ -1.33
UBE4B-208ENST00000475795 GALNT7Q86SF2 657 aa6.75□□□□□ -1.33
UBE4B-208ENST00000475795 RPS19BP1Q86WX3 136 aaKnown RBP6.75□□□□□ -1.33
UBE4B-208ENST00000475795 CNTN4Q8IWV2 1026 aa6.75□□□□□ -1.33
UBE4B-208ENST00000475795 CHERPQ8IWX8 916 aaKnown RBP6.75□□□□□ -1.33
UBE4B-208ENST00000475795 PPIL6Q8IXY8 311 aa6.75□□□□□ -1.33
UBE4B-208ENST00000475795 ZNF295-AS1Q8N0V1 137 aa6.75□□□□□ -1.33
UBE4B-208ENST00000475795 GHDCQ8N2G8 530 aa6.75□□□□□ -1.33
UBE4B-208ENST00000475795 KIF2BQ8N4N8 673 aa6.75□□□□□ -1.33
UBE4B-208ENST00000475795 TBC1D19Q8N5T2 526 aa6.75□□□□□ -1.33
UBE4B-208ENST00000475795 GABPB2Q8TAK5 448 aaPredicted RBP6.75□□□□□ -1.33
UBE4B-208ENST00000475795 NT5CQ8TCD5 201 aa6.75□□□□□ -1.33
UBE4B-208ENST00000475795 PHF10Q8WUB8 498 aaKnown RBP6.75□□□□□ -1.33
UBE4B-208ENST00000475795 PYCR2Q96C36 320 aa6.75□□□□□ -1.33
UBE4B-208ENST00000475795 MTFMTQ96DP5 389 aaKnown RBP6.75□□□□□ -1.33
UBE4B-208ENST00000475795 LINGO1Q96FE5 620 aa6.75□□□□□ -1.33
UBE4B-208ENST00000475795 SNF8Q96H20 258 aa6.75□□□□□ -1.33
UBE4B-208ENST00000475795 MS4A14Q96JA4 679 aa6.75□□□□□ -1.33
UBE4B-208ENST00000475795 PBKQ96KB5 322 aa6.75□□□□□ -1.33
UBE4B-208ENST00000475795 HIST1H2AHQ96KK5 128 aa6.75□□□□□ -1.33
UBE4B-208ENST00000475795 OR4K3Q96R72 315 aa6.75□□□□□ -1.33
UBE4B-208ENST00000475795 OLFM1Q99784 485 aa6.75□□□□□ -1.33
UBE4B-208ENST00000475795 HIST1H2AJQ99878 128 aa6.75□□□□□ -1.33
UBE4B-208ENST00000475795 TRIM51Q9BSJ1 452 aa6.75□□□□□ -1.33
UBE4B-208ENST00000475795 H2AFJQ9BTM1 129 aa6.75□□□□□ -1.33
UBE4B-208ENST00000475795 CDCP1Q9H5V8 836 aa6.75□□□□□ -1.33
UBE4B-208ENST00000475795 TRIM45Q9H8W5 580 aaPredicted RBP6.75□□□□□ -1.33
UBE4B-208ENST00000475795 GPAMQ9HCL2 828 aa6.75□□□□□ -1.33
UBE4B-208ENST00000475795 ARL15Q9NXU5 204 aa6.75□□□□□ -1.33
UBE4B-208ENST00000475795 LRFN1Q9P244 771 aa6.75□□□□□ -1.33
UBE4B-208ENST00000475795 DCHS2Q6V1P9 2916 aa6.74□□□□□ -1.33
UBE4B-208ENST00000475795 IGKV3D-11A0A0A0MRZ8 115 aa6.74□□□□□ -1.33
UBE4B-208ENST00000475795 TCRBV16S1A1N1A0A5B0 115 aa6.74□□□□□ -1.33
UBE4B-208ENST00000475795 PABPN1LA6NDY0 278 aaKnown RBP6.74□□□□□ -1.33
UBE4B-208ENST00000475795 SAGE2PA6NJ88 616 aa6.74□□□□□ -1.33
UBE4B-208ENST00000475795 E9PLN8 166 aa6.74□□□□□ -1.33
UBE4B-208ENST00000475795 PRMT3O60678 531 aa6.74□□□□□ -1.33
UBE4B-208ENST00000475795 B4GALT2O60909 372 aa6.74□□□□□ -1.33
UBE4B-208ENST00000475795 DNAJB6O75190 326 aa6.74□□□□□ -1.33
UBE4B-208ENST00000475795 TTC4O95801 387 aa6.74□□□□□ -1.33
UBE4B-208ENST00000475795 B3GALT4O96024 378 aa6.74□□□□□ -1.33
UBE4B-208ENST00000475795 AHSGP02765 367 aa6.74□□□□□ -1.33
UBE4B-208ENST00000475795 SERPIND1P05546 499 aa6.74□□□□□ -1.33
UBE4B-208ENST00000475795 ENO2P09104 434 aaPredicted RBP6.74□□□□□ -1.33
UBE4B-208ENST00000475795 ZNF888P0CJ79 500 aaPredicted RBP6.74□□□□□ -1.33
UBE4B-208ENST00000475795 ZNF24P17028 368 aa6.74□□□□□ -1.33
UBE4B-208ENST00000475795 SSTR2P30874 369 aa6.74□□□□□ -1.33
UBE4B-208ENST00000475795 TRHRP34981 398 aaPredicted RBP6.74□□□□□ -1.33
UBE4B-208ENST00000475795 AHRP35869 848 aa6.74□□□□□ -1.33
UBE4B-208ENST00000475795 KIR3DL1P43629 444 aa6.74□□□□□ -1.33
UBE4B-208ENST00000475795 FNTAP49354 379 aa6.74□□□□□ -1.33
UBE4B-208ENST00000475795 CYB561P49447 251 aa6.74□□□□□ -1.33
UBE4B-208ENST00000475795 MLF1P58340 268 aa6.74□□□□□ -1.33
UBE4B-208ENST00000475795 IL2P60568 153 aa6.74□□□□□ -1.33
UBE4B-208ENST00000475795 OLR1P78380 273 aa6.74□□□□□ -1.33
UBE4B-208ENST00000475795 BTG2P78543 158 aa6.74□□□□□ -1.33
UBE4B-208ENST00000475795 HSF1Q00613 529 aa6.74□□□□□ -1.33
UBE4B-208ENST00000475795 REEP5Q00765 189 aa6.74□□□□□ -1.33
UBE4B-208ENST00000475795 MAPKAPK3Q16644 382 aa6.74□□□□□ -1.33
UBE4B-208ENST00000475795 RNFT1Q5M7Z0 435 aa6.74□□□□□ -1.33
UBE4B-208ENST00000475795 SPANXN3Q5MJ09 141 aa6.74□□□□□ -1.33
UBE4B-208ENST00000475795 CATSPEREQ5SY80 951 aa6.74□□□□□ -1.33
UBE4B-208ENST00000475795 KIAA0408Q6ZU52 694 aa6.74□□□□□ -1.33
UBE4B-208ENST00000475795 NCCRP1Q6ZVX7 275 aaPredicted RBP6.74□□□□□ -1.33
UBE4B-208ENST00000475795 ABHD13Q7L211 337 aa6.74□□□□□ -1.33
UBE4B-208ENST00000475795 ZNF227Q86WZ6 799 aa6.74□□□□□ -1.33
UBE4B-208ENST00000475795 DOLPP1Q86YN1 238 aa6.74□□□□□ -1.33
UBE4B-208ENST00000475795 EID3Q8N140 333 aa6.74□□□□□ -1.33
UBE4B-208ENST00000475795 CPSF7Q8N684 471 aaKnown RBP6.74□□□□□ -1.33
UBE4B-208ENST00000475795 PLPP7Q8NBV4 271 aa6.74□□□□□ -1.33
UBE4B-208ENST00000475795 ACBD4Q8NC06 268 aa6.74□□□□□ -1.33
UBE4B-208ENST00000475795 UTP15Q8TED0 518 aaKnown RBP6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms