RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 MTRRQ9UBK8 725 aa5.13□□□□□ -1.59
SMC5-203ENST00000475540 PLCL2Q9UPR0 1127 aa5.13□□□□□ -1.59
SMC5-203ENST00000475540 NEDD4P46934 1319 aa5.13□□□□□ -1.59
SMC5-203ENST00000475540 GTPBP10A4D1E9 387 aaKnown RBP5.12□□□□□ -1.59
SMC5-203ENST00000475540 GLTPD2A6NH11 291 aa5.12□□□□□ -1.59
SMC5-203ENST00000475540 H0Y626 953 aa5.12□□□□□ -1.59
SMC5-203ENST00000475540 H3BMM5 538 aa5.12□□□□□ -1.59
SMC5-203ENST00000475540 KIF5CO60282 957 aa5.12□□□□□ -1.59
SMC5-203ENST00000475540 CRKLP46109 303 aaKnown RBP5.12□□□□□ -1.59
SMC5-203ENST00000475540 GMPSP49915 693 aaPredicted RBP5.12□□□□□ -1.59
SMC5-203ENST00000475540 CLCN4P51793 760 aa5.12□□□□□ -1.59
SMC5-203ENST00000475540 RBP5P82980 135 aa5.12□□□□□ -1.59
SMC5-203ENST00000475540 FKBP3Q00688 224 aaKnown RBP5.12□□□□□ -1.59
SMC5-203ENST00000475540 PEX6Q13608 980 aa5.12□□□□□ -1.59
SMC5-203ENST00000475540 C11orf88Q6PI97 169 aa5.12□□□□□ -1.59
SMC5-203ENST00000475540 GPR141Q7Z602 305 aa5.12□□□□□ -1.59
SMC5-203ENST00000475540 OR4N5Q8IXE1 308 aa5.12□□□□□ -1.59
SMC5-203ENST00000475540 PHC2Q8IXK0 858 aa5.12□□□□□ -1.59
SMC5-203ENST00000475540 ZDHHC19Q8WVZ1 309 aaPredicted RBP5.12□□□□□ -1.59
SMC5-203ENST00000475540 SIPA1Q96FS4 1042 aa5.12□□□□□ -1.59
SMC5-203ENST00000475540 MGME1Q9BQP7 344 aa5.12□□□□□ -1.59
SMC5-203ENST00000475540 ZNF577Q9BSK1 485 aa5.12□□□□□ -1.59
SMC5-203ENST00000475540 DESI2Q9BSY9 194 aa5.12□□□□□ -1.59
SMC5-203ENST00000475540 KLK11Q9UBX7 282 aa5.12□□□□□ -1.59
SMC5-203ENST00000475540 A0A087WV48 116 aa5.11□□□□□ -1.59
SMC5-203ENST00000475540 IGHV3-20A0A0C4DH32 117 aa5.11□□□□□ -1.59
SMC5-203ENST00000475540 IGHV3-38A0A0C4DH36 116 aa5.11□□□□□ -1.59
SMC5-203ENST00000475540 SHISA7A6NL88 538 aa5.11□□□□□ -1.59
SMC5-203ENST00000475540 E5RGE8 158 aa5.11□□□□□ -1.59
SMC5-203ENST00000475540 NPIPA3F8WFD2 350 aa5.11□□□□□ -1.59
SMC5-203ENST00000475540 TGDSO95455 350 aa5.11□□□□□ -1.59
SMC5-203ENST00000475540 HOXD4P09016 255 aaPredicted RBP5.11□□□□□ -1.59
SMC5-203ENST00000475540 PCP11498 1178 aaKnown RBP5.11□□□□□ -1.59
SMC5-203ENST00000475540 ATP6V1E1P36543 226 aa5.11□□□□□ -1.59
SMC5-203ENST00000475540 ETV5P41161 510 aa5.11□□□□□ -1.59
SMC5-203ENST00000475540 NAGLUP54802 743 aa5.11□□□□□ -1.59
SMC5-203ENST00000475540 ZFP36L1Q07352 338 aaKnown RBP5.11□□□□□ -1.59
SMC5-203ENST00000475540 PPP2R5CQ13362 524 aa5.11□□□□□ -1.59
SMC5-203ENST00000475540 LBHQ53QV2 105 aaPredicted RBP5.11□□□□□ -1.59
SMC5-203ENST00000475540 ZNF542PQ5EBM4 170 aa5.11□□□□□ -1.59
SMC5-203ENST00000475540 CCDC91Q7Z6B0 441 aa5.11□□□□□ -1.59
SMC5-203ENST00000475540 SLC25A42Q86VD7 318 aa5.11□□□□□ -1.59
SMC5-203ENST00000475540 THNSL1Q8IYQ7 743 aa5.11□□□□□ -1.59
SMC5-203ENST00000475540 OR9Q2Q8NGE9 314 aa5.11□□□□□ -1.59
SMC5-203ENST00000475540 HEXDCQ8WVB3 486 aa5.11□□□□□ -1.59
SMC5-203ENST00000475540 RSPH1Q8WYR4 309 aa5.11□□□□□ -1.59
SMC5-203ENST00000475540 LURAP1Q96LR2 239 aa5.11□□□□□ -1.59
SMC5-203ENST00000475540 ALKBH7Q9BT30 221 aaPredicted RBP5.11□□□□□ -1.59
SMC5-203ENST00000475540 PAPOLGQ9BWT3 736 aaKnown RBP5.11□□□□□ -1.59
SMC5-203ENST00000475540 NACAP1Q9BZK3 213 aa5.11□□□□□ -1.59
SMC5-203ENST00000475540 ANAPC5Q9UJX4 755 aa5.11□□□□□ -1.59
SMC5-203ENST00000475540 NSG2Q9Y328 171 aa5.11□□□□□ -1.59
SMC5-203ENST00000475540 ZFP37Q9Y6Q3 630 aaPredicted RBP5.11□□□□□ -1.59
SMC5-203ENST00000475540 TCP10L2B9ZVM9 353 aa5.1□□□□□ -1.59
SMC5-203ENST00000475540 PRSS46E5RG02 174 aa5.1□□□□□ -1.59
SMC5-203ENST00000475540 PSMA7O14818 248 aa5.1□□□□□ -1.59
SMC5-203ENST00000475540 FLRT2O43155 660 aa5.1□□□□□ -1.59
SMC5-203ENST00000475540 MOCS2O96007 188 aaPredicted RBP5.1□□□□□ -1.59
SMC5-203ENST00000475540 IFNAR1P17181 557 aa5.1□□□□□ -1.59
SMC5-203ENST00000475540 IL4RP24394 825 aa5.1□□□□□ -1.59
SMC5-203ENST00000475540 ZFP36L2P47974 494 aaKnown RBP5.1□□□□□ -1.59
SMC5-203ENST00000475540 PLBD1Q6P4A8 553 aa5.1□□□□□ -1.59
SMC5-203ENST00000475540 C5orf24Q7Z6I8 188 aa5.1□□□□□ -1.59
SMC5-203ENST00000475540 TIGD4Q8IY51 512 aa5.1□□□□□ -1.59
SMC5-203ENST00000475540 NCOA7Q8NI08 942 aa5.1□□□□□ -1.59
SMC5-203ENST00000475540 SPPL2AQ8TCT8 520 aa5.1□□□□□ -1.59
SMC5-203ENST00000475540 C2orf40Q9H1Z8 148 aa5.1□□□□□ -1.59
SMC5-203ENST00000475540 MRPS18CQ9Y3D5 142 aaKnown RBP5.1□□□□□ -1.59
SMC5-203ENST00000475540 GPRASP1Q5JY77 1395 aa5.09□□□□□ -1.59
SMC5-203ENST00000475540 PPIP5K2O43314 1243 aa5.09□□□□□ -1.59
SMC5-203ENST00000475540 GALR3O60755 368 aaPredicted RBP5.09□□□□□ -1.59
SMC5-203ENST00000475540 MT-ND2P03891 347 aa5.09□□□□□ -1.59
SMC5-203ENST00000475540 GBAP04062 536 aa5.09□□□□□ -1.59
SMC5-203ENST00000475540 OR3A3P47888 321 aa5.09□□□□□ -1.59
SMC5-203ENST00000475540 NPY4RP50391 375 aa5.09□□□□□ -1.59
SMC5-203ENST00000475540 CAPZA1P52907 286 aa5.09□□□□□ -1.59
SMC5-203ENST00000475540 LIMK2P53671 638 aa5.09□□□□□ -1.59
SMC5-203ENST00000475540 SMC1AQ14683 1233 aaKnown RBP5.09□□□□□ -1.59
SMC5-203ENST00000475540 UPP1Q16831 310 aa5.09□□□□□ -1.59
SMC5-203ENST00000475540 SPANXN4Q5MJ08 99 aa5.09□□□□□ -1.59
SMC5-203ENST00000475540 SHEQ5VZ18 495 aa5.09□□□□□ -1.59
SMC5-203ENST00000475540 FAM91A1Q658Y4 838 aa5.09□□□□□ -1.59
SMC5-203ENST00000475540 BTNL8Q6UX41 500 aa5.09□□□□□ -1.59
SMC5-203ENST00000475540 COX8CQ7Z4L0 72 aa5.09□□□□□ -1.59
SMC5-203ENST00000475540 SH2D6Q7Z4S9 175 aa5.09□□□□□ -1.59
SMC5-203ENST00000475540 CATSPER3Q86XQ3 398 aa5.09□□□□□ -1.59
SMC5-203ENST00000475540 UNC45BQ8IWX7 931 aa5.09□□□□□ -1.59
SMC5-203ENST00000475540 CARNMT1Q8N4J0 409 aa5.09□□□□□ -1.59
SMC5-203ENST00000475540 LINC00612Q8N6U2 182 aa5.09□□□□□ -1.59
SMC5-203ENST00000475540 Q8NFD4 153 aa5.09□□□□□ -1.59
SMC5-203ENST00000475540 OR5M9Q8NGP3 310 aa5.09□□□□□ -1.59
SMC5-203ENST00000475540 OCC1Q8TAD7 63 aa5.09□□□□□ -1.59
SMC5-203ENST00000475540 GBP5Q96PP8 586 aa5.09□□□□□ -1.59
SMC5-203ENST00000475540 JPT2Q9H910 190 aa5.09□□□□□ -1.59
SMC5-203ENST00000475540 C3orf14Q9HBI5 128 aa5.09□□□□□ -1.59
SMC5-203ENST00000475540 NCKAP1Q9Y2A7 1128 aa5.09□□□□□ -1.59
SMC5-203ENST00000475540 SHISA9B4DS77 424 aa5.08□□□□□ -1.6
SMC5-203ENST00000475540 PDHXO00330 501 aa5.08□□□□□ -1.6
SMC5-203ENST00000475540 SLC7A4O43246 635 aa5.08□□□□□ -1.6
SMC5-203ENST00000475540 HTATSF1O43719 755 aaKnown RBP5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms