RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 ZNF180Q9UJW8 692 aa14.3□□□□□ -0.12
VARS-223ENST00000474643 SH2B3Q9UQQ2 575 aa14.3□□□□□ -0.12
VARS-223ENST00000474643 OSGIN2Q9Y236 505 aa14.3□□□□□ -0.12
VARS-223ENST00000474643 SLC22A14Q9Y267 594 aa14.3□□□□□ -0.12
VARS-223ENST00000474643 KCNE2Q9Y6J6 123 aa14.3□□□□□ -0.12
VARS-223ENST00000474643 SYCE1LA8MT33 242 aa14.29□□□□□ -0.12
VARS-223ENST00000474643 TRIM49D1C9J1S8 452 aa14.29□□□□□ -0.12
VARS-223ENST00000474643 SGK494L7N484 410 aa14.29□□□□□ -0.12
VARS-223ENST00000474643 FOXS1O43638 330 aa14.29□□□□□ -0.12
VARS-223ENST00000474643 OR1F1O43749 312 aa14.29□□□□□ -0.12
VARS-223ENST00000474643 SEC24DO94855 1032 aaPredicted RBP14.29□□□□□ -0.12
VARS-223ENST00000474643 F10P00742 488 aa14.29□□□□□ -0.12
VARS-223ENST00000474643 SNRPAP09012 282 aaKnown RBP14.29□□□□□ -0.12
VARS-223ENST00000474643 CSNK1G2P78368 415 aa14.29□□□□□ -0.12
VARS-223ENST00000474643 ACTN3Q08043 901 aaPredicted RBP14.29□□□□□ -0.12
VARS-223ENST00000474643 RGS1Q08116 209 aa14.29□□□□□ -0.12
VARS-223ENST00000474643 DLG1Q12959 904 aa14.29□□□□□ -0.12
VARS-223ENST00000474643 C18orf21Q32NC0 220 aaPredicted RBP14.29□□□□□ -0.12
VARS-223ENST00000474643 TMPRSS11BQ86T26 416 aa14.29□□□□□ -0.12
VARS-223ENST00000474643 SNX31Q8N9S9 440 aa14.29□□□□□ -0.12
VARS-223ENST00000474643 CATSPER1Q8NEC5 780 aa14.29□□□□□ -0.12
VARS-223ENST00000474643 DCAKDQ8WVC6 231 aa14.29□□□□□ -0.12
VARS-223ENST00000474643 SLC5A11Q8WWX8 675 aa14.29□□□□□ -0.12
VARS-223ENST00000474643 RHBDF1Q96CC6 855 aa14.29□□□□□ -0.12
VARS-223ENST00000474643 MACROD1Q9BQ69 325 aa14.29□□□□□ -0.12
VARS-223ENST00000474643 VN1R1Q9GZP7 353 aa14.29□□□□□ -0.12
VARS-223ENST00000474643 NBPF19A0A087WUL8 3843 aa14.29□□□□□ -0.12
VARS-223ENST00000474643 KCNE1BA0A087WTH5 132 aa14.28□□□□□ -0.12
VARS-223ENST00000474643 HMX2A2RU54 273 aa14.28□□□□□ -0.12
VARS-223ENST00000474643 LRRTM2O43300 516 aa14.28□□□□□ -0.12
VARS-223ENST00000474643 CCNT2O60583 730 aaKnown RBP14.28□□□□□ -0.12
VARS-223ENST00000474643 KERAO60938 352 aa14.28□□□□□ -0.12
VARS-223ENST00000474643 RDH16O75452 317 aa14.28□□□□□ -0.12
VARS-223ENST00000474643 KLHL2O95198 593 aa14.28□□□□□ -0.12
VARS-223ENST00000474643 ALDOAP04075 364 aaKnown RBP14.28□□□□□ -0.12
VARS-223ENST00000474643 ITGAMP11215 1152 aa14.28□□□□□ -0.12
VARS-223ENST00000474643 H2AFXP16104 143 aaPredicted RBP14.28□□□□□ -0.12
VARS-223ENST00000474643 BCL6P41182 706 aa14.28□□□□□ -0.12
VARS-223ENST00000474643 GDF5P43026 501 aa14.28□□□□□ -0.12
VARS-223ENST00000474643 HSPA7P48741 367 aa14.28□□□□□ -0.12
VARS-223ENST00000474643 AGTR2P50052 363 aa14.28□□□□□ -0.12
VARS-223ENST00000474643 MEF2AQ02078 507 aaPredicted RBP14.28□□□□□ -0.12
VARS-223ENST00000474643 HERC3Q15034 1050 aa14.28□□□□□ -0.12
VARS-223ENST00000474643 INAQ16352 499 aa14.28□□□□□ -0.12
VARS-223ENST00000474643 FBXO48Q5FWF7 155 aa14.28□□□□□ -0.12
VARS-223ENST00000474643 BEND6Q5SZJ8 279 aaPredicted RBP14.28□□□□□ -0.12
VARS-223ENST00000474643 CPEB2Q7Z5Q1 589 aaKnown RBP14.28□□□□□ -0.12
VARS-223ENST00000474643 CROCCP2Q86T23 111 aa14.28□□□□□ -0.12
VARS-223ENST00000474643 ISCA2Q86U28 154 aa14.28□□□□□ -0.12
VARS-223ENST00000474643 NEIL2Q969S2 332 aa14.28□□□□□ -0.12
VARS-223ENST00000474643 OR4K3Q96R72 315 aa14.28□□□□□ -0.12
VARS-223ENST00000474643 RBCK1Q9BYM8 510 aa14.28□□□□□ -0.12
VARS-223ENST00000474643 EPB41L4BQ9H329 900 aa14.28□□□□□ -0.12
VARS-223ENST00000474643 SYNPO2LQ9H987 977 aa14.28□□□□□ -0.12
VARS-223ENST00000474643 IGSF5Q9NSI5 407 aa14.28□□□□□ -0.12
VARS-223ENST00000474643 NUDT4Q9NZJ9 180 aa14.28□□□□□ -0.12
VARS-223ENST00000474643 NAALAD2Q9Y3Q0 740 aa14.28□□□□□ -0.12
VARS-223ENST00000474643 SCN3AQ9NY46 2000 aa14.27□□□□□ -0.12
VARS-223ENST00000474643 IQANK1A0A1B0GTG1 560 aa14.27□□□□□ -0.13
VARS-223ENST00000474643 ZNF860A6NHJ4 632 aa14.27□□□□□ -0.13
VARS-223ENST00000474643 UBXN8O00124 270 aa14.27□□□□□ -0.13
VARS-223ENST00000474643 CLGNO14967 610 aa14.27□□□□□ -0.13
VARS-223ENST00000474643 H2AFYO75367 372 aaKnown RBP14.27□□□□□ -0.13
VARS-223ENST00000474643 JRKO75564 520 aa14.27□□□□□ -0.13
VARS-223ENST00000474643 STK16O75716 305 aa14.27□□□□□ -0.13
VARS-223ENST00000474643 CDC123O75794 336 aaPredicted RBP14.27□□□□□ -0.13
VARS-223ENST00000474643 RASAL1O95294 804 aa14.27□□□□□ -0.13
VARS-223ENST00000474643 LDLRP01130 860 aa14.27□□□□□ -0.13
VARS-223ENST00000474643 CRYABP02511 175 aaKnown RBP14.27□□□□□ -0.13
VARS-223ENST00000474643 CELA2AP08217 269 aa14.27□□□□□ -0.13
VARS-223ENST00000474643 CYC1P08574 325 aa14.27□□□□□ -0.13
VARS-223ENST00000474643 RNF224P0DH78 156 aa14.27□□□□□ -0.13
VARS-223ENST00000474643 GFAPP14136 432 aa14.27□□□□□ -0.13
VARS-223ENST00000474643 GNAZP19086 355 aa14.27□□□□□ -0.13
VARS-223ENST00000474643 JAK1P23458 1154 aa14.27□□□□□ -0.13
VARS-223ENST00000474643 HSD17B3P37058 310 aa14.27□□□□□ -0.13
VARS-223ENST00000474643 TNFSF10P50591 281 aa14.27□□□□□ -0.13
VARS-223ENST00000474643 ACAP2Q15057 778 aa14.27□□□□□ -0.13
VARS-223ENST00000474643 PCOLCEQ15113 449 aa14.27□□□□□ -0.13
VARS-223ENST00000474643 RBBP5Q15291 538 aaKnown RBP14.27□□□□□ -0.13
VARS-223ENST00000474643 ZXDCQ2QGD7 858 aaPredicted RBP14.27□□□□□ -0.13
VARS-223ENST00000474643 CDKL4Q5MAI5 379 aa14.27□□□□□ -0.13
VARS-223ENST00000474643 CATSPEREQ5SY80 951 aa14.27□□□□□ -0.13
VARS-223ENST00000474643 TMEM214Q6NUQ4 689 aaKnown RBP14.27□□□□□ -0.13
VARS-223ENST00000474643 LANCL3Q6ZV70 420 aa14.27□□□□□ -0.13
VARS-223ENST00000474643 ABHD13Q7L211 337 aa14.27□□□□□ -0.13
VARS-223ENST00000474643 PRSS41Q7RTY9 318 aa14.27□□□□□ -0.13
VARS-223ENST00000474643 VN1R4Q7Z5H5 301 aa14.27□□□□□ -0.13
VARS-223ENST00000474643 TDRPQ86YL5 185 aa14.27□□□□□ -0.13
VARS-223ENST00000474643 CENPLQ8N0S6 344 aaPredicted RBP14.27□□□□□ -0.13
VARS-223ENST00000474643 KCT2Q8NC54 265 aa14.27□□□□□ -0.13
VARS-223ENST00000474643 ESAMQ96AP7 390 aa14.27□□□□□ -0.13
VARS-223ENST00000474643 MTBPQ96DY7 904 aa14.27□□□□□ -0.13
VARS-223ENST00000474643 PEX11GQ96HA9 241 aa14.27□□□□□ -0.13
VARS-223ENST00000474643 AIF1LQ9BQI0 150 aa14.27□□□□□ -0.13
VARS-223ENST00000474643 TMEM109Q9BVC6 243 aa14.27□□□□□ -0.13
VARS-223ENST00000474643 CAPS2Q9BXY5 557 aa14.27□□□□□ -0.13
VARS-223ENST00000474643 ROPN1BQ9BZX4 212 aaPredicted RBP14.27□□□□□ -0.13
VARS-223ENST00000474643 ROPN1Q9HAT0 212 aaPredicted RBP14.27□□□□□ -0.13
VARS-223ENST00000474643 PELI2Q9HAT8 420 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms