RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 CCDC167Q9P0B6 97 aa4.46□□□□□ -1.7
CCNL1-215ENST00000474539 EIF2B4Q9UI10 523 aaKnown RBP4.46□□□□□ -1.7
CCNL1-215ENST00000474539 SALL4Q9UJQ4 1053 aa4.46□□□□□ -1.7
CCNL1-215ENST00000474539 TMEM59LQ9UK28 342 aa4.46□□□□□ -1.7
CCNL1-215ENST00000474539 POU2F3Q9UKI9 436 aa4.46□□□□□ -1.7
CCNL1-215ENST00000474539 SLC7A11Q9UPY5 501 aa4.46□□□□□ -1.7
CCNL1-215ENST00000474539 KLF13Q9Y2Y9 288 aaPredicted RBP4.46□□□□□ -1.7
CCNL1-215ENST00000474539 PCDHGB6Q9Y5F9 930 aa4.46□□□□□ -1.7
CCNL1-215ENST00000474539 GMPPBQ9Y5P6 360 aa4.46□□□□□ -1.7
CCNL1-215ENST00000474539 LOC102725191A0A1B0GVB3 256 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 A8MUI8 341 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 TFECO14948 347 aaPredicted RBP4.45□□□□□ -1.7
CCNL1-215ENST00000474539 CLOCKO15516 846 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 DNAJB6O75190 326 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 ITGA10O75578 1167 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 TNFAIP8O95379 198 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 ANGPTL1O95841 491 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 FADS2O95864 444 aaKnown RBP4.45□□□□□ -1.7
CCNL1-215ENST00000474539 NTRK1P04629 796 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 ASGR2P07307 311 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 RETP07949 1114 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 HLA-EP13747 358 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 OTX2P32243 289 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 EIF1P41567 113 aaKnown RBP4.45□□□□□ -1.7
CCNL1-215ENST00000474539 CCR10P46092 362 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 TRAP1Q12931 704 aaKnown RBP4.45□□□□□ -1.7
CCNL1-215ENST00000474539 SMAD1Q15797 465 aaKnown RBP4.45□□□□□ -1.7
CCNL1-215ENST00000474539 ZBTB6Q15916 424 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 SLC5A12Q1EHB4 618 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 BMP8AQ7Z5Y6 402 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 DTWD2Q8NBA8 298 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 ABHD11Q8NFV4 315 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 OR7G1Q8NGA0 311 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 OR56A3Q8NH54 315 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 AENQ8WTP8 325 aaKnown RBP4.45□□□□□ -1.7
CCNL1-215ENST00000474539 CRYGNQ8WXF5 182 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 ZNF516Q92618 1163 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 REEP4Q9H6H4 257 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 CDH20Q9HBT6 801 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 ACTR10Q9NZ32 417 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 PTGFRNQ9P2B2 879 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 MCM8Q9UJA3 840 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 KLHL21Q9UJP4 597 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 SSR3Q9UNL2 185 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 PCDHGA10Q9Y5H3 936 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 LYVE1Q9Y5Y7 322 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 MYH1P12882 1939 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 DLG5Q8TDM6 1919 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 PRSS38A1L453 326 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 PRRG2O14669 202 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 PIP5K1BO14986 540 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 LDB2O43679 373 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 BUD23O43709 281 aaKnown RBP4.45□□□□□ -1.7
CCNL1-215ENST00000474539 RGS20O76081 388 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 F11P03951 625 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 CAPN1P07384 714 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 HOXC4P09017 264 aaPredicted RBP4.45□□□□□ -1.7
CCNL1-215ENST00000474539 CHRNB2P17787 502 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 GADD45AP24522 165 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 ACVR2AP27037 513 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 ACVRL1P37023 503 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 SEPHS1P49903 392 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 VASPP50552 380 aaPredicted RBP4.45□□□□□ -1.7
CCNL1-215ENST00000474539 GBX2P52951 348 aaPredicted RBP4.45□□□□□ -1.7
CCNL1-215ENST00000474539 SEC24CP53992 1094 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 ATXN1P54253 815 aaKnown RBP4.45□□□□□ -1.7
CCNL1-215ENST00000474539 VSX2P58304 361 aaPredicted RBP4.45□□□□□ -1.7
CCNL1-215ENST00000474539 TEKQ02763 1124 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 EMX2Q04743 252 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 FOXD4Q12950 439 aaPredicted RBP4.45□□□□□ -1.7
CCNL1-215ENST00000474539 MLC1Q15049 377 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 ANKDD1AQ495B1 522 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 NAIF1Q69YI7 327 aaPredicted RBP4.45□□□□□ -1.7
CCNL1-215ENST00000474539 SLC25A24Q6NUK1 477 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 SLC39A4Q6P5W5 647 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 CRELD2Q6UXH1 353 aaPredicted RBP4.45□□□□□ -1.7
CCNL1-215ENST00000474539 TRABD2AQ86V40 505 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 CIR1Q86X95 450 aaPredicted RBP4.45□□□□□ -1.7
CCNL1-215ENST00000474539 IRF2BP1Q8IU81 584 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.45□□□□□ -1.7
CCNL1-215ENST00000474539 GSTCDQ8NEC7 633 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 OR52E4Q8NGH9 312 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 GOT1L1Q8NHS2 421 aaPredicted RBP4.45□□□□□ -1.7
CCNL1-215ENST00000474539 PNPT1Q8TCS8 783 aaKnown RBP4.45□□□□□ -1.7
CCNL1-215ENST00000474539 GAB3Q8WWW8 586 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 KAT2AQ92830 837 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 BOD1Q96IK1 185 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 FAM84AQ96KN4 292 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 TPSD1Q9BZJ3 242 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 ABCG8Q9H221 673 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 CHRAC1Q9NRG0 131 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 ING3Q9NXR8 418 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 LRIT1Q9P2V4 623 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 OR6C76A6NM76 312 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 A8MU76 341 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 MANBAO00462 879 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 CDK2AP1O14519 115 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 PGRMC2O15173 223 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 LRP3O75074 770 aa4.45□□□□□ -1.7
CCNL1-215ENST00000474539 TBX18O95935 607 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms