RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 ACP1P24666 158 aa3.35□□□□□ -1.87
UBR3-208ENST00000474426 C21orf33P30042 268 aaPredicted RBP3.35□□□□□ -1.87
UBR3-208ENST00000474426 P2RY2P41231 377 aa3.35□□□□□ -1.87
UBR3-208ENST00000474426 NRIP1P48552 1158 aa3.35□□□□□ -1.87
UBR3-208ENST00000474426 CDK8P49336 464 aa3.35□□□□□ -1.87
UBR3-208ENST00000474426 YBX1P67809 324 aaKnown RBP3.35□□□□□ -1.87
UBR3-208ENST00000474426 BLOC1S1P78537 153 aa3.35□□□□□ -1.87
UBR3-208ENST00000474426 INSM1Q01101 510 aaPredicted RBP3.35□□□□□ -1.87
UBR3-208ENST00000474426 TRIP4Q15650 581 aaPredicted RBP3.35□□□□□ -1.87
UBR3-208ENST00000474426 TAZQ16635 292 aa3.35□□□□□ -1.87
UBR3-208ENST00000474426 ZNF618Q5T7W0 954 aa3.35□□□□□ -1.87
UBR3-208ENST00000474426 PRAMEF13Q5VWM6 474 aa3.35□□□□□ -1.87
UBR3-208ENST00000474426 PLCXD3Q63HM9 321 aa3.35□□□□□ -1.87
UBR3-208ENST00000474426 UGT3A1Q6NUS8 523 aa3.35□□□□□ -1.87
UBR3-208ENST00000474426 FAHD2BQ6P2I3 314 aaPredicted RBP3.35□□□□□ -1.87
UBR3-208ENST00000474426 CRTC3Q6UUV7 619 aa3.35□□□□□ -1.87
UBR3-208ENST00000474426 SLC16A14Q7RTX9 510 aa3.35□□□□□ -1.87
UBR3-208ENST00000474426 PROSER1Q86XN7 944 aa3.35□□□□□ -1.87
UBR3-208ENST00000474426 PPIL6Q8IXY8 311 aa3.35□□□□□ -1.87
UBR3-208ENST00000474426 OR7G3Q8NG95 312 aa3.35□□□□□ -1.87
UBR3-208ENST00000474426 ZFP28Q8NHY6 868 aa3.35□□□□□ -1.87
UBR3-208ENST00000474426 TMEM45BQ96B21 275 aa3.35□□□□□ -1.87
UBR3-208ENST00000474426 FAHD2AQ96GK7 314 aa3.35□□□□□ -1.87
UBR3-208ENST00000474426 CAPZA3Q96KX2 299 aa3.35□□□□□ -1.87
UBR3-208ENST00000474426 HHIPQ96QV1 700 aa3.35□□□□□ -1.87
UBR3-208ENST00000474426 RNF2Q99496 336 aa3.35□□□□□ -1.87
UBR3-208ENST00000474426 SGPP1Q9BX95 441 aa3.35□□□□□ -1.87
UBR3-208ENST00000474426 SMG9Q9H0W8 520 aaKnown RBP3.35□□□□□ -1.87
UBR3-208ENST00000474426 TMEM38AQ9H6F2 299 aa3.35□□□□□ -1.87
UBR3-208ENST00000474426 ZNF430Q9H8G1 570 aaPredicted RBP3.35□□□□□ -1.87
UBR3-208ENST00000474426 POLR1BQ9H9Y6 1135 aa3.35□□□□□ -1.87
UBR3-208ENST00000474426 PNPOQ9NVS9 261 aa3.35□□□□□ -1.87
UBR3-208ENST00000474426 IMPACTQ9P2X3 320 aa3.35□□□□□ -1.87
UBR3-208ENST00000474426 IRAK3Q9Y616 596 aa3.35□□□□□ -1.87
UBR3-208ENST00000474426 CHD1O14646 1710 aa3.35□□□□□ -1.87
UBR3-208ENST00000474426 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.35□□□□□ -1.87
UBR3-208ENST00000474426 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.35□□□□□ -1.87
UBR3-208ENST00000474426 CCT8L1PA6NM43 557 aa3.35□□□□□ -1.87
UBR3-208ENST00000474426 PRMT5O14744 637 aaPredicted RBP3.35□□□□□ -1.87
UBR3-208ENST00000474426 ARPC3O15145 178 aa3.35□□□□□ -1.87
UBR3-208ENST00000474426 CLIC2O15247 247 aa3.35□□□□□ -1.87
UBR3-208ENST00000474426 PAPSS1O43252 624 aaPredicted RBP3.35□□□□□ -1.87
UBR3-208ENST00000474426 PRKYO43930 277 aa3.35□□□□□ -1.87
UBR3-208ENST00000474426 SRP72O76094 671 aaKnown RBP3.35□□□□□ -1.87
UBR3-208ENST00000474426 ALDOAP04075 364 aaKnown RBP3.35□□□□□ -1.87
UBR3-208ENST00000474426 CHRM2P08172 466 aa3.35□□□□□ -1.87
UBR3-208ENST00000474426 NUDT7P0C024 238 aa3.35□□□□□ -1.87
UBR3-208ENST00000474426 NPSP0C0P6 89 aa3.35□□□□□ -1.87
UBR3-208ENST00000474426 NID1P14543 1247 aa3.35□□□□□ -1.87
UBR3-208ENST00000474426 PFKFB1P16118 471 aa3.35□□□□□ -1.87
UBR3-208ENST00000474426 GSTM3P21266 225 aa3.35□□□□□ -1.87
UBR3-208ENST00000474426 HLA-DMAP28067 261 aa3.35□□□□□ -1.87
UBR3-208ENST00000474426 DCTDP32321 178 aa3.35□□□□□ -1.87
UBR3-208ENST00000474426 MAP2K6P52564 334 aa3.35□□□□□ -1.87
UBR3-208ENST00000474426 PLA2G16P53816 162 aa3.35□□□□□ -1.87
UBR3-208ENST00000474426 NCKAP1LP55160 1127 aa3.35□□□□□ -1.87
UBR3-208ENST00000474426 ESRRGP62508 458 aa3.35□□□□□ -1.87
UBR3-208ENST00000474426 IL18R1Q13478 541 aa3.35□□□□□ -1.87
UBR3-208ENST00000474426 SLC29A2Q14542 456 aa3.35□□□□□ -1.87
UBR3-208ENST00000474426 PTPRCAPQ14761 206 aa3.35□□□□□ -1.87
UBR3-208ENST00000474426 GRM4Q14833 912 aa3.35□□□□□ -1.87
UBR3-208ENST00000474426 PCK2Q16822 640 aa3.35□□□□□ -1.87
UBR3-208ENST00000474426 ARL6IP4Q66PJ3 421 aaKnown RBP3.35□□□□□ -1.87
UBR3-208ENST00000474426 REEP3Q6NUK4 255 aa3.35□□□□□ -1.87
UBR3-208ENST00000474426 CD300LGQ6UXG3 332 aa3.35□□□□□ -1.87
UBR3-208ENST00000474426 GDPD4Q6W3E5 623 aa3.35□□□□□ -1.87
UBR3-208ENST00000474426 C3P1Q6ZMU1 363 aa3.35□□□□□ -1.87
UBR3-208ENST00000474426 MBOAT1Q6ZNC8 495 aa3.35□□□□□ -1.87
UBR3-208ENST00000474426 GDF7Q7Z4P5 450 aa3.35□□□□□ -1.87
UBR3-208ENST00000474426 GPAT4Q86UL3 456 aa3.35□□□□□ -1.87
UBR3-208ENST00000474426 TRABD2AQ86V40 505 aa3.35□□□□□ -1.87
UBR3-208ENST00000474426 KCNMB4Q86W47 210 aa3.35□□□□□ -1.87
UBR3-208ENST00000474426 RNF113BQ8IZP6 322 aaKnown RBP3.35□□□□□ -1.87
UBR3-208ENST00000474426 FAM58AQ8N1B3 248 aa3.35□□□□□ -1.87
UBR3-208ENST00000474426 UBE2J2Q8N2K1 259 aa3.35□□□□□ -1.87
UBR3-208ENST00000474426 FAM160A2Q8N612 972 aaPredicted RBP3.35□□□□□ -1.87
UBR3-208ENST00000474426 TMEM156Q8N614 296 aa3.35□□□□□ -1.87
UBR3-208ENST00000474426 OR4M2Q8NGB6 313 aa3.35□□□□□ -1.87
UBR3-208ENST00000474426 OR56B1Q8NGI3 324 aa3.35□□□□□ -1.87
UBR3-208ENST00000474426 TBC1D15Q8TC07 691 aa3.35□□□□□ -1.87
UBR3-208ENST00000474426 GLYATL2Q8WU03 294 aa3.35□□□□□ -1.87
UBR3-208ENST00000474426 ALG3Q92685 438 aa3.35□□□□□ -1.87
UBR3-208ENST00000474426 CDS1Q92903 461 aa3.35□□□□□ -1.87
UBR3-208ENST00000474426 ALKBH3Q96Q83 286 aaPredicted RBP3.35□□□□□ -1.87
UBR3-208ENST00000474426 NACC1Q96RE7 527 aa3.35□□□□□ -1.87
UBR3-208ENST00000474426 PARK7Q99497 189 aaKnown RBP3.35□□□□□ -1.87
UBR3-208ENST00000474426 MED18Q9BUE0 208 aa3.35□□□□□ -1.87
UBR3-208ENST00000474426 SEBOXQ9HB31 216 aaPredicted RBP3.35□□□□□ -1.87
UBR3-208ENST00000474426 NLGN3Q9NZ94 848 aa3.35□□□□□ -1.87
UBR3-208ENST00000474426 MARCH4Q9P2E8 410 aaPredicted RBP3.35□□□□□ -1.87
UBR3-208ENST00000474426 SAE1Q9UBE0 346 aaPredicted RBP3.35□□□□□ -1.87
UBR3-208ENST00000474426 EPHA6Q9UF33 1036 aa3.35□□□□□ -1.87
UBR3-208ENST00000474426 SUSD2Q9UGT4 822 aa3.35□□□□□ -1.87
UBR3-208ENST00000474426 ZNF451Q9Y4E5 1061 aa3.35□□□□□ -1.87
UBR3-208ENST00000474426 SPATA31A5Q5VU36 1347 aa3.34□□□□□ -1.87
UBR3-208ENST00000474426 SPATA31A7Q8IWB4 1347 aa3.34□□□□□ -1.87
UBR3-208ENST00000474426 A0A1W2PNV4 684 aa3.34□□□□□ -1.87
UBR3-208ENST00000474426 TCRBV21S2A2A0A5A6 115 aa3.34□□□□□ -1.87
UBR3-208ENST00000474426 GRID2IPA4D2P6 1211 aa3.34□□□□□ -1.87
UBR3-208ENST00000474426 C2orf72A6NCS6 295 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms