RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 PRAMEF5Q5TYX0 476 aa5.84□□□□□ -1.47
SMARCE1-208ENST00000474246 PRAMEF9Q5VWM5 478 aa5.84□□□□□ -1.47
SMARCE1-208ENST00000474246 PRAMEF6Q5VXH4 476 aa5.84□□□□□ -1.47
SMARCE1-208ENST00000474246 TCEAL6Q6IPX3 200 aa5.84□□□□□ -1.47
SMARCE1-208ENST00000474246 PSAPL1Q6NUJ1 521 aa5.84□□□□□ -1.47
SMARCE1-208ENST00000474246 FBXO42Q6P3S6 717 aa5.84□□□□□ -1.47
SMARCE1-208ENST00000474246 TMEM88Q6PEY1 159 aa5.84□□□□□ -1.47
SMARCE1-208ENST00000474246 BHLHB9Q6PI77 547 aa5.84□□□□□ -1.47
SMARCE1-208ENST00000474246 CYFIP1Q7L576 1253 aa5.84□□□□□ -1.47
SMARCE1-208ENST00000474246 CXXC5Q7LFL8 322 aaKnown RBP5.84□□□□□ -1.47
SMARCE1-208ENST00000474246 SETD3Q86TU7 594 aaPredicted RBP5.84□□□□□ -1.47
SMARCE1-208ENST00000474246 PRSS58Q8IYP2 241 aa5.84□□□□□ -1.47
SMARCE1-208ENST00000474246 LNX2Q8N448 690 aa5.84□□□□□ -1.47
SMARCE1-208ENST00000474246 SUMF1Q8NBK3 374 aa5.84□□□□□ -1.47
SMARCE1-208ENST00000474246 CSNK2A3Q8NEV1 391 aa5.84□□□□□ -1.47
SMARCE1-208ENST00000474246 C9orf43Q8TAL5 461 aaPredicted RBP5.84□□□□□ -1.47
SMARCE1-208ENST00000474246 SLC35F5Q8WV83 523 aa5.84□□□□□ -1.47
SMARCE1-208ENST00000474246 MTBPQ96DY7 904 aa5.84□□□□□ -1.47
SMARCE1-208ENST00000474246 LIN37Q96GY3 246 aaPredicted RBP5.84□□□□□ -1.47
SMARCE1-208ENST00000474246 SLC30A3Q99726 388 aa5.84□□□□□ -1.47
SMARCE1-208ENST00000474246 C7orf50Q9BRJ6 194 aaKnown RBP5.84□□□□□ -1.47
SMARCE1-208ENST00000474246 HINT2Q9BX68 163 aa5.84□□□□□ -1.47
SMARCE1-208ENST00000474246 MRPL13Q9BYD1 178 aaKnown RBP5.84□□□□□ -1.47
SMARCE1-208ENST00000474246 ZNF768Q9H5H4 540 aaKnown RBP5.84□□□□□ -1.47
SMARCE1-208ENST00000474246 SOX17Q9H6I2 414 aaPredicted RBP5.84□□□□□ -1.47
SMARCE1-208ENST00000474246 MED20Q9H944 212 aa5.84□□□□□ -1.47
SMARCE1-208ENST00000474246 ZFP14Q9HCL3 533 aa5.84□□□□□ -1.47
SMARCE1-208ENST00000474246 POT1Q9NUX5 634 aa5.84□□□□□ -1.47
SMARCE1-208ENST00000474246 SEMA5BQ9P283 1151 aa5.84□□□□□ -1.47
SMARCE1-208ENST00000474246 SIX4Q9UIU6 781 aa5.84□□□□□ -1.47
SMARCE1-208ENST00000474246 AGO1Q9UL18 857 aaKnown RBP5.84□□□□□ -1.47
SMARCE1-208ENST00000474246 ZNF281Q9Y2X9 895 aa5.84□□□□□ -1.47
SMARCE1-208ENST00000474246 GRIP1Q9Y3R0 1128 aa5.84□□□□□ -1.47
SMARCE1-208ENST00000474246 TNFRSF18Q9Y5U5 241 aa5.84□□□□□ -1.47
SMARCE1-208ENST00000474246 CFAP20Q9Y6A4 193 aaKnown RBP5.84□□□□□ -1.47
SMARCE1-208ENST00000474246 C17orf102A2RUQ5 167 aa5.84□□□□□ -1.47
SMARCE1-208ENST00000474246 ANKRD61A6NGH8 418 aa5.84□□□□□ -1.47
SMARCE1-208ENST00000474246 FAM177BA6PVY3 158 aa5.84□□□□□ -1.47
SMARCE1-208ENST00000474246 A8MZ25 164 aa5.84□□□□□ -1.47
SMARCE1-208ENST00000474246 ANKRD28O15084 1053 aa5.84□□□□□ -1.47
SMARCE1-208ENST00000474246 CLIC2O15247 247 aa5.84□□□□□ -1.47
SMARCE1-208ENST00000474246 STX7O15400 261 aaKnown RBP5.84□□□□□ -1.47
SMARCE1-208ENST00000474246 SLC31A2O15432 143 aa5.84□□□□□ -1.47
SMARCE1-208ENST00000474246 NUPL2O15504 423 aaKnown RBP5.84□□□□□ -1.47
SMARCE1-208ENST00000474246 CST8O60676 142 aa5.84□□□□□ -1.47
SMARCE1-208ENST00000474246 CXCL14O95715 111 aa5.84□□□□□ -1.47
SMARCE1-208ENST00000474246 TOP3BO95985 862 aaKnown RBP5.84□□□□□ -1.47
SMARCE1-208ENST00000474246 LCATP04180 440 aa5.84□□□□□ -1.47
SMARCE1-208ENST00000474246 TGFBR2P37173 567 aa5.84□□□□□ -1.47
SMARCE1-208ENST00000474246 LIMS1P48059 325 aa5.84□□□□□ -1.47
SMARCE1-208ENST00000474246 PGDP52209 483 aa5.84□□□□□ -1.47
SMARCE1-208ENST00000474246 RABGGTBP53611 331 aa5.84□□□□□ -1.47
SMARCE1-208ENST00000474246 GALK2Q01415 458 aa5.84□□□□□ -1.47
SMARCE1-208ENST00000474246 TNK2Q07912 1038 aa5.84□□□□□ -1.47
SMARCE1-208ENST00000474246 ILF3Q12906 894 aaKnown RBP eCLIP5.84□□□□□ -1.47
SMARCE1-208ENST00000474246 BFSP2Q13515 415 aa5.84□□□□□ -1.47
SMARCE1-208ENST00000474246 ME3Q16798 604 aa5.84□□□□□ -1.47
SMARCE1-208ENST00000474246 PHKG1Q16816 387 aa5.84□□□□□ -1.47
SMARCE1-208ENST00000474246 PCK2Q16822 640 aa5.84□□□□□ -1.47
SMARCE1-208ENST00000474246 FAM47AQ5JRC9 791 aa5.84□□□□□ -1.47
SMARCE1-208ENST00000474246 NOL9Q5SY16 702 aaKnown RBP5.84□□□□□ -1.47
SMARCE1-208ENST00000474246 GPR107Q5VW38 600 aa5.84□□□□□ -1.47
SMARCE1-208ENST00000474246 PAPD7Q5XG87 772 aaKnown RBP5.84□□□□□ -1.47
SMARCE1-208ENST00000474246 METTL7BQ6UX53 244 aa5.84□□□□□ -1.47
SMARCE1-208ENST00000474246 SFR1Q86XK3 245 aa5.84□□□□□ -1.47
SMARCE1-208ENST00000474246 ADGRF4Q8IZF3 695 aa5.84□□□□□ -1.47
SMARCE1-208ENST00000474246 FAM89BQ8N5H3 189 aa5.84□□□□□ -1.47
SMARCE1-208ENST00000474246 CCDC185Q8N715 623 aa5.84□□□□□ -1.47
SMARCE1-208ENST00000474246 OR4D10Q8NGI6 311 aa5.84□□□□□ -1.47
SMARCE1-208ENST00000474246 OR4A15Q8NGL6 344 aa5.84□□□□□ -1.47
SMARCE1-208ENST00000474246 OR13C9Q8NGT0 318 aa5.84□□□□□ -1.47
SMARCE1-208ENST00000474246 DNASE1L2Q92874 299 aa5.84□□□□□ -1.47
SMARCE1-208ENST00000474246 TP53INP1Q96A56 240 aa5.84□□□□□ -1.47
SMARCE1-208ENST00000474246 MIB2Q96AX9 1013 aa5.84□□□□□ -1.47
SMARCE1-208ENST00000474246 EME1Q96AY2 570 aa5.84□□□□□ -1.47
SMARCE1-208ENST00000474246 SLC6A18Q96N87 628 aa5.84□□□□□ -1.47
SMARCE1-208ENST00000474246 BTBD9Q96Q07 612 aa5.84□□□□□ -1.47
SMARCE1-208ENST00000474246 C17orf80Q9BSJ5 609 aa5.84□□□□□ -1.47
SMARCE1-208ENST00000474246 OSBPL1AQ9BXW6 950 aa5.84□□□□□ -1.47
SMARCE1-208ENST00000474246 GSDMCQ9BYG8 508 aa5.84□□□□□ -1.47
SMARCE1-208ENST00000474246 OR2B2Q9GZK3 357 aa5.84□□□□□ -1.47
SMARCE1-208ENST00000474246 S1PR5Q9H228 398 aa5.84□□□□□ -1.47
SMARCE1-208ENST00000474246 ADAM7Q9H2U9 754 aa5.84□□□□□ -1.47
SMARCE1-208ENST00000474246 SMOC2Q9H3U7 446 aa5.84□□□□□ -1.47
SMARCE1-208ENST00000474246 COG4Q9H9E3 785 aa5.84□□□□□ -1.47
SMARCE1-208ENST00000474246 SEMA4BQ9NPR2 832 aaPredicted RBP5.84□□□□□ -1.47
SMARCE1-208ENST00000474246 RNF146Q9NTX7 359 aa5.84□□□□□ -1.47
SMARCE1-208ENST00000474246 GFOD1Q9NXC2 390 aa5.84□□□□□ -1.47
SMARCE1-208ENST00000474246 WSB2Q9NYS7 404 aaPredicted RBP5.84□□□□□ -1.47
SMARCE1-208ENST00000474246 MTCH1Q9NZJ7 389 aa5.84□□□□□ -1.47
SMARCE1-208ENST00000474246 KCND2Q9NZV8 630 aa5.84□□□□□ -1.47
SMARCE1-208ENST00000474246 ADAM22Q9P0K1 906 aa5.84□□□□□ -1.47
SMARCE1-208ENST00000474246 KCNH3Q9ULD8 1083 aa5.84□□□□□ -1.47
SMARCE1-208ENST00000474246 KCNK6Q9Y257 313 aa5.84□□□□□ -1.47
SMARCE1-208ENST00000474246 PRAMEF27A3QJZ7 478 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 PRAMEF25A6NGN4 478 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 PRAMEF26H0Y7S4 382 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 ARNTLO00327 626 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 PRAMEF4O60810 478 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 PRAMEF11O60813 436 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms