RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 CLK4Q9HAZ1 481 aaKnown RBP13.43□□□□□ -0.26
VAMP4-203ENST00000474047 MLXIPLQ9NP71 852 aa13.43□□□□□ -0.26
VAMP4-203ENST00000474047 C5AR2Q9P296 337 aa13.43□□□□□ -0.26
VAMP4-203ENST00000474047 XPR1Q9UBH6 696 aa13.43□□□□□ -0.26
VAMP4-203ENST00000474047 FETUBQ9UGM5 382 aa13.43□□□□□ -0.26
VAMP4-203ENST00000474047 ZNF490Q9ULM2 529 aaPredicted RBP13.43□□□□□ -0.26
VAMP4-203ENST00000474047 SPTA1P02549 2419 aa13.42□□□□□ -0.26
VAMP4-203ENST00000474047 A0A0G2JN53 185 aa13.42□□□□□ -0.26
VAMP4-203ENST00000474047 LRIT2A6NDA9 550 aa13.42□□□□□ -0.26
VAMP4-203ENST00000474047 RNH1P13489 461 aaKnown RBP13.42□□□□□ -0.26
VAMP4-203ENST00000474047 PLA2G2AP14555 144 aa13.42□□□□□ -0.26
VAMP4-203ENST00000474047 CASP2P42575 452 aa13.42□□□□□ -0.26
VAMP4-203ENST00000474047 PLA2G16P53816 162 aa13.42□□□□□ -0.26
VAMP4-203ENST00000474047 ACTN3Q08043 901 aaPredicted RBP13.42□□□□□ -0.26
VAMP4-203ENST00000474047 HYAL2Q12891 473 aa13.42□□□□□ -0.26
VAMP4-203ENST00000474047 NAA30Q147X3 362 aaPredicted RBP13.42□□□□□ -0.26
VAMP4-203ENST00000474047 PCBP2Q15366 365 aaKnown RBP eCLIP13.42□□□□□ -0.26
VAMP4-203ENST00000474047 AGAP7PQ5VUJ5 663 aa13.42□□□□□ -0.26
VAMP4-203ENST00000474047 TIFABQ6ZNK6 161 aa13.42□□□□□ -0.26
VAMP4-203ENST00000474047 KBTBD2Q8IY47 623 aa13.42□□□□□ -0.26
VAMP4-203ENST00000474047 AGAP4Q96P64 663 aa13.42□□□□□ -0.26
VAMP4-203ENST00000474047 SMAD5Q99717 465 aaKnown RBP13.42□□□□□ -0.26
VAMP4-203ENST00000474047 LHPPQ9H008 270 aa13.42□□□□□ -0.26
VAMP4-203ENST00000474047 IPPKQ9H8X2 491 aa13.42□□□□□ -0.26
VAMP4-203ENST00000474047 RIC8BQ9NVN3 520 aa13.42□□□□□ -0.26
VAMP4-203ENST00000474047 COPG2Q9UBF2 871 aa13.42□□□□□ -0.26
VAMP4-203ENST00000474047 PCSK5Q92824 1860 aa13.42□□□□□ -0.26
VAMP4-203ENST00000474047 LRRC14BA6NHZ5 514 aa13.42□□□□□ -0.26
VAMP4-203ENST00000474047 SMIM23A6NLE4 172 aa13.42□□□□□ -0.26
VAMP4-203ENST00000474047 GOLGA8RI6L899 631 aa13.42□□□□□ -0.26
VAMP4-203ENST00000474047 J3QKU1 62 aa13.42□□□□□ -0.26
VAMP4-203ENST00000474047 B3GALT2O43825 422 aa13.42□□□□□ -0.26
VAMP4-203ENST00000474047 KLK8O60259 260 aa13.42□□□□□ -0.26
VAMP4-203ENST00000474047 PRAMEF4O60810 478 aa13.42□□□□□ -0.26
VAMP4-203ENST00000474047 B4GALT2O60909 372 aa13.42□□□□□ -0.26
VAMP4-203ENST00000474047 WFS1O76024 890 aa13.42□□□□□ -0.26
VAMP4-203ENST00000474047 SIX3O95343 332 aaPredicted RBP13.42□□□□□ -0.26
VAMP4-203ENST00000474047 FHP07954 510 aa13.42□□□□□ -0.26
VAMP4-203ENST00000474047 CYC1P08574 325 aa13.42□□□□□ -0.26
VAMP4-203ENST00000474047 ICAM2P13598 275 aa13.42□□□□□ -0.26
VAMP4-203ENST00000474047 EPORP19235 508 aa13.42□□□□□ -0.26
VAMP4-203ENST00000474047 TAC1P20366 129 aa13.42□□□□□ -0.26
VAMP4-203ENST00000474047 GCAP28676 217 aa13.42□□□□□ -0.26
VAMP4-203ENST00000474047 EEF1DP29692 281 aaKnown RBP13.42□□□□□ -0.26
VAMP4-203ENST00000474047 SERPINB1P30740 379 aa13.42□□□□□ -0.26
VAMP4-203ENST00000474047 CASRP41180 1078 aa13.42□□□□□ -0.26
VAMP4-203ENST00000474047 SOX8P57073 446 aa13.42□□□□□ -0.26
VAMP4-203ENST00000474047 AP2B1P63010 937 aa13.42□□□□□ -0.26
VAMP4-203ENST00000474047 PHEXP78562 749 aa13.42□□□□□ -0.26
VAMP4-203ENST00000474047 DDX39BQ13838 428 aaKnown RBP13.42□□□□□ -0.26
VAMP4-203ENST00000474047 NSDHLQ15738 373 aa13.42□□□□□ -0.26
VAMP4-203ENST00000474047 PRAMEF9Q5VWM5 478 aa13.42□□□□□ -0.26
VAMP4-203ENST00000474047 GOLGA7Q7Z5G4 137 aa13.42□□□□□ -0.26
VAMP4-203ENST00000474047 CPEB2Q7Z5Q1 589 aaKnown RBP13.42□□□□□ -0.26
VAMP4-203ENST00000474047 ZADH2Q8N4Q0 377 aa13.42□□□□□ -0.26
VAMP4-203ENST00000474047 SRFBP1Q8NEF9 429 aaKnown RBP13.42□□□□□ -0.26
VAMP4-203ENST00000474047 OR2L5Q8NG80 312 aa13.42□□□□□ -0.26
VAMP4-203ENST00000474047 REPS1Q96D71 796 aa13.42□□□□□ -0.26
VAMP4-203ENST00000474047 MS4A6EQ96DS6 147 aa13.42□□□□□ -0.26
VAMP4-203ENST00000474047 MESP1Q9BRJ9 268 aa13.42□□□□□ -0.26
VAMP4-203ENST00000474047 MFRPQ9BY79 579 aa13.42□□□□□ -0.26
VAMP4-203ENST00000474047 ANKZF1Q9H8Y5 726 aa13.42□□□□□ -0.26
VAMP4-203ENST00000474047 NUP210LQ5VU65 1888 aa13.41□□□□□ -0.26
VAMP4-203ENST00000474047 TLN1Q9Y490 2541 aaKnown RBP13.41□□□□□ -0.26
VAMP4-203ENST00000474047 KALRNO60229 2985 aa13.41□□□□□ -0.26
VAMP4-203ENST00000474047 IGHV1-45A0A0A0MS14 117 aa13.41□□□□□ -0.26
VAMP4-203ENST00000474047 OR2W5A6NFC9 320 aa13.41□□□□□ -0.26
VAMP4-203ENST00000474047 SMIM10L1P0DMW3 83 aa13.41□□□□□ -0.26
VAMP4-203ENST00000474047 COX6A1P12074 109 aa13.41□□□□□ -0.26
VAMP4-203ENST00000474047 CD22P20273 847 aa13.41□□□□□ -0.26
VAMP4-203ENST00000474047 HNRNPH1P31943 449 aaKnown RBP13.41□□□□□ -0.26
VAMP4-203ENST00000474047 ABRAXAS2Q15018 415 aa13.41□□□□□ -0.26
VAMP4-203ENST00000474047 LIPJQ5W064 366 aa13.41□□□□□ -0.26
VAMP4-203ENST00000474047 GRHL2Q6ISB3 625 aa13.41□□□□□ -0.26
VAMP4-203ENST00000474047 METTL2BQ6P1Q9 378 aaKnown RBP13.41□□□□□ -0.26
VAMP4-203ENST00000474047 TMEM205Q6UW68 189 aa13.41□□□□□ -0.26
VAMP4-203ENST00000474047 CHSY3Q70JA7 882 aa13.41□□□□□ -0.26
VAMP4-203ENST00000474047 ARMC2Q8NEN0 867 aa13.41□□□□□ -0.26
VAMP4-203ENST00000474047 SMIM10Q96HG1 83 aa13.41□□□□□ -0.26
VAMP4-203ENST00000474047 F2RL3Q96RI0 385 aa13.41□□□□□ -0.26
VAMP4-203ENST00000474047 CENPKQ9BS16 269 aa13.41□□□□□ -0.26
VAMP4-203ENST00000474047 TUBB6Q9BUF5 446 aa13.41□□□□□ -0.26
VAMP4-203ENST00000474047 TRIM4Q9C037 500 aa13.41□□□□□ -0.26
VAMP4-203ENST00000474047 ZNF700Q9H0M5 742 aa13.41□□□□□ -0.26
VAMP4-203ENST00000474047 EPB41L4BQ9H329 900 aa13.41□□□□□ -0.26
VAMP4-203ENST00000474047 ZNF552Q9H707 407 aaPredicted RBP13.41□□□□□ -0.26
VAMP4-203ENST00000474047 PPCSQ9HAB8 311 aa13.41□□□□□ -0.26
VAMP4-203ENST00000474047 ADGRE2Q9UHX3 823 aa13.41□□□□□ -0.26
VAMP4-203ENST00000474047 PCDHGA11Q9Y5H2 935 aa13.41□□□□□ -0.26
VAMP4-203ENST00000474047 LOC102723996A0A087X1L8 192 aa13.4□□□□□ -0.26
VAMP4-203ENST00000474047 TTLL8A6PVC2 850 aa13.4□□□□□ -0.26
VAMP4-203ENST00000474047 STX16-NPEPL1H3BU86 382 aa13.4□□□□□ -0.26
VAMP4-203ENST00000474047 STX16O14662 325 aa13.4□□□□□ -0.26
VAMP4-203ENST00000474047 PRMT3O60678 531 aa13.4□□□□□ -0.26
VAMP4-203ENST00000474047 DNAJB6O75190 326 aa13.4□□□□□ -0.26
VAMP4-203ENST00000474047 SH3BGRLO75368 114 aa13.4□□□□□ -0.26
VAMP4-203ENST00000474047 PYGBP11216 843 aa13.4□□□□□ -0.26
VAMP4-203ENST00000474047 KRT15P19012 456 aa13.4□□□□□ -0.26
VAMP4-203ENST00000474047 SLCO1A2P46721 670 aa13.4□□□□□ -0.26
VAMP4-203ENST00000474047 CCNG1P51959 295 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms