RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 CRYBG2Q8N1P7 616 aa1.39□□□□□ -2.19
CCDC39-203ENST00000473854 IQUBQ8NA54 791 aa1.39□□□□□ -2.19
CCDC39-203ENST00000473854 MLKLQ8NB16 471 aa1.39□□□□□ -2.19
CCDC39-203ENST00000473854 SLC38A9Q8NBW4 561 aa1.39□□□□□ -2.19
CCDC39-203ENST00000473854 NUP37Q8NFH4 326 aa1.39□□□□□ -2.19
CCDC39-203ENST00000473854 SCFD1Q8WVM8 642 aa1.39□□□□□ -2.19
CCDC39-203ENST00000473854 ANKRD7Q92527 254 aa1.39□□□□□ -2.19
CCDC39-203ENST00000473854 P2RX5Q93086 422 aa1.39□□□□□ -2.19
CCDC39-203ENST00000473854 ZKSCAN4Q969J2 545 aaPredicted RBP1.39□□□□□ -2.19
CCDC39-203ENST00000473854 SAAL1Q96ER3 474 aa1.39□□□□□ -2.19
CCDC39-203ENST00000473854 PDLIM5Q96HC4 596 aaKnown RBP1.39□□□□□ -2.19
CCDC39-203ENST00000473854 C12orf42Q96LP6 360 aa1.39□□□□□ -2.19
CCDC39-203ENST00000473854 AK8Q96MA6 479 aa1.39□□□□□ -2.19
CCDC39-203ENST00000473854 PPM1MQ96MI6 270 aa1.39□□□□□ -2.19
CCDC39-203ENST00000473854 AGAP4Q96P64 663 aa1.39□□□□□ -2.19
CCDC39-203ENST00000473854 GSDMAQ96QA5 445 aa1.39□□□□□ -2.19
CCDC39-203ENST00000473854 NR1H4Q96RI1 486 aaPredicted RBP1.39□□□□□ -2.19
CCDC39-203ENST00000473854 CHP1Q99653 195 aa1.39□□□□□ -2.19
CCDC39-203ENST00000473854 SLF1Q9BQI6 1058 aa1.39□□□□□ -2.19
CCDC39-203ENST00000473854 NAT10Q9H0A0 1025 aaKnown RBP1.39□□□□□ -2.19
CCDC39-203ENST00000473854 TMX4Q9H1E5 349 aaPredicted RBP1.39□□□□□ -2.19
CCDC39-203ENST00000473854 DEFB129Q9H1M3 183 aa1.39□□□□□ -2.19
CCDC39-203ENST00000473854 GANQ9H2C0 597 aa1.39□□□□□ -2.19
CCDC39-203ENST00000473854 RPAP3Q9H6T3 665 aaPredicted RBP1.39□□□□□ -2.19
CCDC39-203ENST00000473854 MAGIXQ9H6Y5 334 aa1.39□□□□□ -2.19
CCDC39-203ENST00000473854 PSTPIP2Q9H939 334 aa1.39□□□□□ -2.19
CCDC39-203ENST00000473854 MAGEF1Q9HAY2 307 aa1.39□□□□□ -2.19
CCDC39-203ENST00000473854 SLC38A10Q9HBR0 1119 aa1.39□□□□□ -2.19
CCDC39-203ENST00000473854 RAVER2Q9HCJ3 691 aaKnown RBP1.39□□□□□ -2.19
CCDC39-203ENST00000473854 PREBQ9HCU5 417 aa1.39□□□□□ -2.19
CCDC39-203ENST00000473854 POLD4Q9HCU8 107 aa1.39□□□□□ -2.19
CCDC39-203ENST00000473854 SPHK2Q9NRA0 654 aa1.39□□□□□ -2.19
CCDC39-203ENST00000473854 EXOC1Q9NV70 894 aa1.39□□□□□ -2.19
CCDC39-203ENST00000473854 TRMT1Q9NXH9 659 aaKnown RBP1.39□□□□□ -2.19
CCDC39-203ENST00000473854 TMOD2Q9NZR1 351 aa1.39□□□□□ -2.19
CCDC39-203ENST00000473854 TBC1D7Q9P0N9 293 aa1.39□□□□□ -2.19
CCDC39-203ENST00000473854 ABI3Q9P2A4 366 aa1.39□□□□□ -2.19
CCDC39-203ENST00000473854 TRIM10Q9UDY6 481 aa1.39□□□□□ -2.19
CCDC39-203ENST00000473854 CNOT8Q9UFF9 292 aaKnown RBP1.39□□□□□ -2.19
CCDC39-203ENST00000473854 SLC13A4Q9UKG4 626 aa1.39□□□□□ -2.19
CCDC39-203ENST00000473854 MKLN1Q9UL63 735 aa1.39□□□□□ -2.19
CCDC39-203ENST00000473854 TFR2Q9UP52 801 aa1.39□□□□□ -2.19
CCDC39-203ENST00000473854 B3GALT5Q9Y2C3 310 aa1.39□□□□□ -2.19
CCDC39-203ENST00000473854 RIPK3Q9Y572 518 aa1.39□□□□□ -2.19
CCDC39-203ENST00000473854 CAPN7Q9Y6W3 813 aa1.39□□□□□ -2.19
CCDC39-203ENST00000473854 V9GYY5 206 aaPredicted RBP1.39□□□□□ -2.19
CCDC39-203ENST00000473854 BDP1A6H8Y1 2624 aa1.39□□□□□ -2.19
CCDC39-203ENST00000473854 NUP214P35658 2090 aaPredicted RBP1.39□□□□□ -2.19
CCDC39-203ENST00000473854 NINQ8N4C6 2090 aa1.39□□□□□ -2.19
CCDC39-203ENST00000473854 MYO10Q9HD67 2058 aa1.39□□□□□ -2.19
CCDC39-203ENST00000473854 PRRC2CQ9Y520 2896 aaKnown RBP1.39□□□□□ -2.19
CCDC39-203ENST00000473854 NUP210Q8TEM1 1887 aaPredicted RBP1.39□□□□□ -2.19
CCDC39-203ENST00000473854 PFASO15067 1338 aa1.39□□□□□ -2.19
CCDC39-203ENST00000473854 UMODL1Q5DID0 1318 aa1.39□□□□□ -2.19
CCDC39-203ENST00000473854 PHLPP2Q6ZVD8 1323 aa1.39□□□□□ -2.19
CCDC39-203ENST00000473854 HEATR5BQ9P2D3 2071 aa1.38□□□□□ -2.19
CCDC39-203ENST00000473854 F5P12259 2224 aa1.38□□□□□ -2.19
CCDC39-203ENST00000473854 KANSL1LA0AUZ9 987 aa1.38□□□□□ -2.19
CCDC39-203ENST00000473854 NPIPB15A6NHN6 443 aaPredicted RBP1.38□□□□□ -2.19
CCDC39-203ENST00000473854 MSGN1A6NI15 193 aa1.38□□□□□ -2.19
CCDC39-203ENST00000473854 C15orf61A6NNL5 157 aa1.38□□□□□ -2.19
CCDC39-203ENST00000473854 H3BQ06 376 aaPredicted RBP1.38□□□□□ -2.19
CCDC39-203ENST00000473854 TMEM189-UBE2V1I3L0A0 370 aa1.38□□□□□ -2.19
CCDC39-203ENST00000473854 J3KRW8 73 aa1.38□□□□□ -2.19
CCDC39-203ENST00000473854 PSMA7O14818 248 aa1.38□□□□□ -2.19
CCDC39-203ENST00000473854 TGFB1I1O43294 461 aa1.38□□□□□ -2.19
CCDC39-203ENST00000473854 PLPP2O43688 288 aa1.38□□□□□ -2.19
CCDC39-203ENST00000473854 ATP9AO75110 1047 aa1.38□□□□□ -2.19
CCDC39-203ENST00000473854 FLOT1O75955 427 aa1.38□□□□□ -2.19
CCDC39-203ENST00000473854 NOL4O94818 638 aa1.38□□□□□ -2.19
CCDC39-203ENST00000473854 SLITRK3O94933 977 aa1.38□□□□□ -2.19
CCDC39-203ENST00000473854 STBD1O95210 358 aa1.38□□□□□ -2.19
CCDC39-203ENST00000473854 GCNT3O95395 438 aa1.38□□□□□ -2.19
CCDC39-203ENST00000473854 TBX18O95935 607 aa1.38□□□□□ -2.19
CCDC39-203ENST00000473854 CD4P01730 458 aa1.38□□□□□ -2.19
CCDC39-203ENST00000473854 TPM3P06753 285 aa1.38□□□□□ -2.19
CCDC39-203ENST00000473854 ADRB2P07550 413 aa1.38□□□□□ -2.19
CCDC39-203ENST00000473854 TPM2P07951 284 aa1.38□□□□□ -2.19
CCDC39-203ENST00000473854 PLEKP08567 350 aaPredicted RBP1.38□□□□□ -2.19
CCDC39-203ENST00000473854 POLR2MP0CAP2 368 aa1.38□□□□□ -2.19
CCDC39-203ENST00000473854 PNMA6AP0CW24 399 aaPredicted RBP1.38□□□□□ -2.19
CCDC39-203ENST00000473854 UBL4AP11441 157 aa1.38□□□□□ -2.19
CCDC39-203ENST00000473854 SKILP12757 684 aa1.38□□□□□ -2.19
CCDC39-203ENST00000473854 PRKACGP22612 351 aa1.38□□□□□ -2.19
CCDC39-203ENST00000473854 PAX3P23760 479 aa1.38□□□□□ -2.19
CCDC39-203ENST00000473854 HRH2P25021 359 aa1.38□□□□□ -2.19
CCDC39-203ENST00000473854 HMGB2P26583 209 aaKnown RBP1.38□□□□□ -2.19
CCDC39-203ENST00000473854 RPA1P27694 616 aa1.38□□□□□ -2.19
CCDC39-203ENST00000473854 NMT1P30419 496 aaKnown RBP1.38□□□□□ -2.19
CCDC39-203ENST00000473854 CASP14P31944 242 aa1.38□□□□□ -2.19
CCDC39-203ENST00000473854 CAPGP40121 348 aa1.38□□□□□ -2.19
CCDC39-203ENST00000473854 ARL1P40616 181 aaPredicted RBP1.38□□□□□ -2.19
CCDC39-203ENST00000473854 EPS15P42566 896 aa1.38□□□□□ -2.19
CCDC39-203ENST00000473854 ZNF131P52739 623 aa1.38□□□□□ -2.19
CCDC39-203ENST00000473854 MRPL12P52815 198 aaKnown RBP1.38□□□□□ -2.19
CCDC39-203ENST00000473854 HMGCS2P54868 508 aa1.38□□□□□ -2.19
CCDC39-203ENST00000473854 F2RL1P55085 397 aa1.38□□□□□ -2.19
CCDC39-203ENST00000473854 PAX9P55771 341 aa1.38□□□□□ -2.19
CCDC39-203ENST00000473854 EIF3BP55884 814 aaKnown RBP1.38□□□□□ -2.19
CCDC39-203ENST00000473854 BACE1P56817 501 aa1.38□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms