RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 SLC5A7Q9GZV3 580 aa2.23□□□□□ -2.05
CALD1-216ENST00000473714 FAM234AQ9H0X4 552 aa2.23□□□□□ -2.05
CALD1-216ENST00000473714 WNT5BQ9H1J7 359 aa2.23□□□□□ -2.05
CALD1-216ENST00000473714 SNX25Q9H3E2 840 aa2.23□□□□□ -2.05
CALD1-216ENST00000473714 KLHL31Q9H511 634 aa2.23□□□□□ -2.05
CALD1-216ENST00000473714 MAGIXQ9H6Y5 334 aa2.23□□□□□ -2.05
CALD1-216ENST00000473714 ANKZF1Q9H8Y5 726 aa2.23□□□□□ -2.05
CALD1-216ENST00000473714 IL1RAPL2Q9NP60 686 aa2.23□□□□□ -2.05
CALD1-216ENST00000473714 KRCC1Q9NPI7 259 aaPredicted RBP2.23□□□□□ -2.05
CALD1-216ENST00000473714 EQTNQ9NQ60 294 aa2.23□□□□□ -2.05
CALD1-216ENST00000473714 ZNF71Q9NQZ8 489 aaPredicted RBP2.23□□□□□ -2.05
CALD1-216ENST00000473714 TRPC4Q9UBN4 977 aa2.23□□□□□ -2.05
CALD1-216ENST00000473714 HOOK1Q9UJC3 728 aaKnown RBP2.23□□□□□ -2.05
CALD1-216ENST00000473714 PA2G4Q9UQ80 394 aaKnown RBP2.23□□□□□ -2.05
CALD1-216ENST00000473714 B3GALT5Q9Y2C3 310 aa2.23□□□□□ -2.05
CALD1-216ENST00000473714 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP2.23□□□□□ -2.05
CALD1-216ENST00000473714 LIPGQ9Y5X9 500 aa2.23□□□□□ -2.05
CALD1-216ENST00000473714 ANK2Q01484 3957 aa2.23□□□□□ -2.05
CALD1-216ENST00000473714 WNK1Q9H4A3 2382 aa2.23□□□□□ -2.05
CALD1-216ENST00000473714 DENND4CQ5VZ89 1909 aa2.23□□□□□ -2.05
CALD1-216ENST00000473714 MYOFQ9NZM1 2061 aa2.22□□□□□ -2.05
CALD1-216ENST00000473714 RYR1P21817 5038 aa2.22□□□□□ -2.05
CALD1-216ENST00000473714 UBR4Q5T4S7 5183 aa2.22□□□□□ -2.05
CALD1-216ENST00000473714 TNRC6AQ8NDV7 1962 aaKnown RBP2.22□□□□□ -2.05
CALD1-216ENST00000473714 IGKV6D-41A0A0C4DH26 115 aa2.22□□□□□ -2.05
CALD1-216ENST00000473714 TMEM272A0A1B0GTI8 110 aa2.22□□□□□ -2.05
CALD1-216ENST00000473714 SMIM35A0A1B0GVV1 85 aa2.22□□□□□ -2.05
CALD1-216ENST00000473714 A0A1W2PPW3 197 aa2.22□□□□□ -2.05
CALD1-216ENST00000473714 RPS10-NUDT3A0A1W2PQS6 291 aa2.22□□□□□ -2.05
CALD1-216ENST00000473714 A0A1W2PR77 199 aa2.22□□□□□ -2.05
CALD1-216ENST00000473714 A4D1N5 150 aa2.22□□□□□ -2.05
CALD1-216ENST00000473714 C15orf62A8K5M9 175 aa2.22□□□□□ -2.05
CALD1-216ENST00000473714 SLC33A1O00400 549 aaPredicted RBP2.22□□□□□ -2.05
CALD1-216ENST00000473714 CLDN4O14493 209 aa2.22□□□□□ -2.05
CALD1-216ENST00000473714 ADAM10O14672 748 aa2.22□□□□□ -2.05
CALD1-216ENST00000473714 MDM4O15151 490 aa2.22□□□□□ -2.05
CALD1-216ENST00000473714 EIF3DO15371 548 aaKnown RBP eCLIP2.22□□□□□ -2.05
CALD1-216ENST00000473714 INSIG1O15503 277 aa2.22□□□□□ -2.05
CALD1-216ENST00000473714 ADAM12O43184 909 aa2.22□□□□□ -2.05
CALD1-216ENST00000473714 MOSPD3O75425 235 aa2.22□□□□□ -2.05
CALD1-216ENST00000473714 B3GALNT1O75752 331 aa2.22□□□□□ -2.05
CALD1-216ENST00000473714 SERPINI2O75830 405 aa2.22□□□□□ -2.05
CALD1-216ENST00000473714 REC8O95072 547 aa2.22□□□□□ -2.05
CALD1-216ENST00000473714 NDUFB8O95169 186 aa2.22□□□□□ -2.05
CALD1-216ENST00000473714 BMP10O95393 424 aa2.22□□□□□ -2.05
CALD1-216ENST00000473714 CH25HO95992 272 aa2.22□□□□□ -2.05
CALD1-216ENST00000473714 PNPP00491 289 aa2.22□□□□□ -2.05
CALD1-216ENST00000473714 KRT19P08727 400 aa2.22□□□□□ -2.05
CALD1-216ENST00000473714 C21orf33P30042 268 aaPredicted RBP2.22□□□□□ -2.05
CALD1-216ENST00000473714 CDC25CP30307 473 aa2.22□□□□□ -2.05
CALD1-216ENST00000473714 HNRNPH1P31943 449 aaKnown RBP2.22□□□□□ -2.05
CALD1-216ENST00000473714 IL15P40933 162 aaPredicted RBP2.22□□□□□ -2.05
CALD1-216ENST00000473714 NT5C2P49902 561 aa2.22□□□□□ -2.05
CALD1-216ENST00000473714 TAS2R38P59533 333 aa2.22□□□□□ -2.05
CALD1-216ENST00000473714 ZP1P60852 638 aa2.22□□□□□ -2.05
CALD1-216ENST00000473714 STX1BP61266 288 aa2.22□□□□□ -2.05
CALD1-216ENST00000473714 ARF5P84085 180 aa2.22□□□□□ -2.05
CALD1-216ENST00000473714 ACSM1Q08AH1 577 aa2.22□□□□□ -2.05
CALD1-216ENST00000473714 RPA4Q13156 261 aa2.22□□□□□ -2.05
CALD1-216ENST00000473714 TUBB2AQ13885 445 aa2.22□□□□□ -2.05
CALD1-216ENST00000473714 MELKQ14680 651 aa2.22□□□□□ -2.05
CALD1-216ENST00000473714 NR1D2Q14995 579 aa2.22□□□□□ -2.05
CALD1-216ENST00000473714 VWC2Q2TAL6 325 aa2.22□□□□□ -2.05
CALD1-216ENST00000473714 PRTGQ2VWP7 1150 aa2.22□□□□□ -2.05
CALD1-216ENST00000473714 ANKRD20A4Q4UJ75 823 aa2.22□□□□□ -2.05
CALD1-216ENST00000473714 ANKRD20A8PQ5CZ79 823 aa2.22□□□□□ -2.05
CALD1-216ENST00000473714 TCTE1Q5JU00 501 aa2.22□□□□□ -2.05
CALD1-216ENST00000473714 GLRA4Q5JXX5 417 aa2.22□□□□□ -2.05
CALD1-216ENST00000473714 DNTTIP2Q5QJE6 756 aaKnown RBP2.22□□□□□ -2.05
CALD1-216ENST00000473714 ANKRD20A2Q5SQ80 823 aa2.22□□□□□ -2.05
CALD1-216ENST00000473714 ANKRD20A1Q5TYW2 823 aa2.22□□□□□ -2.05
CALD1-216ENST00000473714 ANKRD20A3Q5VUR7 823 aa2.22□□□□□ -2.05
CALD1-216ENST00000473714 ETFRF1Q6IPR1 90 aa2.22□□□□□ -2.05
CALD1-216ENST00000473714 PLEKHA7Q6IQ23 1121 aa2.22□□□□□ -2.05
CALD1-216ENST00000473714 SLC18B1Q6NT16 456 aa2.22□□□□□ -2.05
CALD1-216ENST00000473714 WDR73Q6P4I2 378 aa2.22□□□□□ -2.05
CALD1-216ENST00000473714 ALKBH5Q6P6C2 394 aaKnown RBP2.22□□□□□ -2.05
CALD1-216ENST00000473714 TEX38Q6PEX7 206 aa2.22□□□□□ -2.05
CALD1-216ENST00000473714 CNSTQ6PJW8 725 aa2.22□□□□□ -2.05
CALD1-216ENST00000473714 SHC4Q6S5L8 630 aa2.22□□□□□ -2.05
CALD1-216ENST00000473714 PRSS55Q6UWB4 352 aaPredicted RBP2.22□□□□□ -2.05
CALD1-216ENST00000473714 ENPP7Q6UWV6 458 aa2.22□□□□□ -2.05
CALD1-216ENST00000473714 ZNF782Q6ZMW2 699 aaPredicted RBP2.22□□□□□ -2.05
CALD1-216ENST00000473714 GBP6Q6ZN66 633 aa2.22□□□□□ -2.05
CALD1-216ENST00000473714 ZNF367Q7RTV3 350 aa2.22□□□□□ -2.05
CALD1-216ENST00000473714 YTHDF3Q7Z739 585 aaKnown RBP2.22□□□□□ -2.05
CALD1-216ENST00000473714 ZGRF1Q86YA3 2104 aa2.22□□□□□ -2.05
CALD1-216ENST00000473714 MAP7D3Q8IWC1 876 aa2.22□□□□□ -2.05
CALD1-216ENST00000473714 NANOGP1Q8N7R0 232 aa2.22□□□□□ -2.05
CALD1-216ENST00000473714 KDM1BQ8NB78 822 aa2.22□□□□□ -2.05
CALD1-216ENST00000473714 ATAD1Q8NBU5 361 aa2.22□□□□□ -2.05
CALD1-216ENST00000473714 C7orf57Q8NEG2 295 aa2.22□□□□□ -2.05
CALD1-216ENST00000473714 ANKRD20A12PQ8NF67 263 aa2.22□□□□□ -2.05
CALD1-216ENST00000473714 NEK11Q8NG66 645 aa2.22□□□□□ -2.05
CALD1-216ENST00000473714 OR8H1Q8NGG4 311 aa2.22□□□□□ -2.05
CALD1-216ENST00000473714 HMGCLL1Q8TB92 370 aa2.22□□□□□ -2.05
CALD1-216ENST00000473714 DPF1Q92782 380 aa2.22□□□□□ -2.05
CALD1-216ENST00000473714 RPL36ALQ969Q0 106 aaKnown RBP2.22□□□□□ -2.05
CALD1-216ENST00000473714 SNX21Q969T3 373 aa2.22□□□□□ -2.05
CALD1-216ENST00000473714 SPDL1Q96EA4 605 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms