RNA–Protein interactions for RNA: ENST00000472610.5

COMMD3-210, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 428 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-210ENST00000472610 MSH2P43246 934 aa16.07■□□□□ 0.16
COMMD3-210ENST00000472610 EFNA3P52797 238 aa16.07■□□□□ 0.16
COMMD3-210ENST00000472610 DOC2AQ14183 400 aa16.07■□□□□ 0.16
COMMD3-210ENST00000472610 NSDHLQ15738 373 aa16.07■□□□□ 0.16
COMMD3-210ENST00000472610 ANKRD37Q7Z713 158 aa16.07■□□□□ 0.16
COMMD3-210ENST00000472610 GALNT11Q8NCW6 608 aa16.07■□□□□ 0.16
COMMD3-210ENST00000472610 DNAJB14Q8TBM8 379 aa16.07■□□□□ 0.16
COMMD3-210ENST00000472610 UBTD2Q8WUN7 234 aa16.07■□□□□ 0.16
COMMD3-210ENST00000472610 CCT6BQ92526 530 aa16.07■□□□□ 0.16
COMMD3-210ENST00000472610 PSMF1Q92530 271 aa16.07■□□□□ 0.16
COMMD3-210ENST00000472610 KLHL31Q9H511 634 aa16.07■□□□□ 0.16
COMMD3-210ENST00000472610 LANCL2Q9NS86 450 aa16.07■□□□□ 0.16
COMMD3-210ENST00000472610 LUZP4Q9P127 313 aa16.07■□□□□ 0.16
COMMD3-210ENST00000472610 TENM4Q6N022 2769 aa16.07■□□□□ 0.16
COMMD3-210ENST00000472610 LRIT2A6NDA9 550 aa16.06■□□□□ 0.16
COMMD3-210ENST00000472610 K7EPI3 171 aa16.06■□□□□ 0.16
COMMD3-210ENST00000472610 PSMD12O00232 456 aaPredicted RBP16.06■□□□□ 0.16
COMMD3-210ENST00000472610 UQCRHP07919 91 aa16.06■□□□□ 0.16
COMMD3-210ENST00000472610 RNH1P13489 461 aaKnown RBP16.06■□□□□ 0.16
COMMD3-210ENST00000472610 IRF9Q00978 393 aa16.06■□□□□ 0.16
COMMD3-210ENST00000472610 RHAGQ02094 409 aa16.06■□□□□ 0.16
COMMD3-210ENST00000472610 ACTN3Q08043 901 aaPredicted RBP16.06■□□□□ 0.16
COMMD3-210ENST00000472610 PCDH1Q08174 1060 aa16.06■□□□□ 0.16
COMMD3-210ENST00000472610 CHIT1Q13231 466 aa16.06■□□□□ 0.16
COMMD3-210ENST00000472610 E2F2Q14209 437 aa16.06■□□□□ 0.16
COMMD3-210ENST00000472610 PLAG1Q6DJT9 500 aa16.06■□□□□ 0.16
COMMD3-210ENST00000472610 LINC00696Q6ZRV3 163 aa16.06■□□□□ 0.16
COMMD3-210ENST00000472610 LANCL3Q6ZV70 420 aa16.06■□□□□ 0.16
COMMD3-210ENST00000472610 BRIX1Q8TDN6 353 aaKnown RBP16.06■□□□□ 0.16
COMMD3-210ENST00000472610 UBE2E3Q969T4 207 aa16.06■□□□□ 0.16
COMMD3-210ENST00000472610 MS4A6EQ96DS6 147 aa16.06■□□□□ 0.16
COMMD3-210ENST00000472610 PAFAH2Q99487 392 aa16.06■□□□□ 0.16
COMMD3-210ENST00000472610 NPLQ9BXD5 320 aaPredicted RBP16.06■□□□□ 0.16
COMMD3-210ENST00000472610 SLC29A3Q9BZD2 475 aa16.06■□□□□ 0.16
COMMD3-210ENST00000472610 VPS11Q9H270 941 aa16.06■□□□□ 0.16
COMMD3-210ENST00000472610 RHBGQ9H310 441 aa16.06■□□□□ 0.16
COMMD3-210ENST00000472610 PTGFRNQ9P2B2 879 aa16.06■□□□□ 0.16
COMMD3-210ENST00000472610 ZNF180Q9UJW8 692 aa16.06■□□□□ 0.16
COMMD3-210ENST00000472610 ZNF490Q9ULM2 529 aaPredicted RBP16.06■□□□□ 0.16
COMMD3-210ENST00000472610 NFU1Q9UMS0 254 aa16.06■□□□□ 0.16
COMMD3-210ENST00000472610 DYTNA2CJ06 578 aa16.05■□□□□ 0.16
COMMD3-210ENST00000472610 POC1B-GALNT4F8VUJ3 575 aa16.05■□□□□ 0.16
COMMD3-210ENST00000472610 PRAMEF4O60810 478 aa16.05■□□□□ 0.16
COMMD3-210ENST00000472610 CDC123O75794 336 aaPredicted RBP16.05■□□□□ 0.16
COMMD3-210ENST00000472610 SEC24DO94855 1032 aaPredicted RBP16.05■□□□□ 0.16
COMMD3-210ENST00000472610 B3GALT4O96024 378 aa16.05■□□□□ 0.16
COMMD3-210ENST00000472610 MTHFD2P13995 350 aa16.05■□□□□ 0.16
COMMD3-210ENST00000472610 EPB42P16452 691 aa16.05■□□□□ 0.16
COMMD3-210ENST00000472610 EPORP19235 508 aa16.05■□□□□ 0.16
COMMD3-210ENST00000472610 SOX11P35716 441 aa16.05■□□□□ 0.16
COMMD3-210ENST00000472610 GLRBP48167 497 aa16.05■□□□□ 0.16
COMMD3-210ENST00000472610 ALDH18A1P54886 795 aaKnown RBP16.05■□□□□ 0.16
COMMD3-210ENST00000472610 OLR1P78380 273 aa16.05■□□□□ 0.16
COMMD3-210ENST00000472610 BTN3A2P78410 334 aa16.05■□□□□ 0.16
COMMD3-210ENST00000472610 TGM3Q08188 693 aa16.05■□□□□ 0.16
COMMD3-210ENST00000472610 ABRAXAS2Q15018 415 aa16.05■□□□□ 0.16
COMMD3-210ENST00000472610 TLR1Q15399 786 aa16.05■□□□□ 0.16
COMMD3-210ENST00000472610 EXT1Q16394 746 aa16.05■□□□□ 0.16
COMMD3-210ENST00000472610 BTBD16Q32M84 506 aa16.05■□□□□ 0.16
COMMD3-210ENST00000472610 ADPRMQ3LIE5 342 aa16.05■□□□□ 0.16
COMMD3-210ENST00000472610 UBAP2Q5T6F2 1119 aaKnown RBP16.05■□□□□ 0.16
COMMD3-210ENST00000472610 LGSNQ5TDP6 509 aa16.05■□□□□ 0.16
COMMD3-210ENST00000472610 PRAMEF9Q5VWM5 478 aa16.05■□□□□ 0.16
COMMD3-210ENST00000472610 TRIM40Q6P9F5 258 aa16.05■□□□□ 0.16
COMMD3-210ENST00000472610 QSOX2Q6ZRP7 698 aa16.05■□□□□ 0.16
COMMD3-210ENST00000472610 TRMT10CQ7L0Y3 403 aaKnown RBP16.05■□□□□ 0.16
COMMD3-210ENST00000472610 SHISA5Q8N114 240 aa16.05■□□□□ 0.16
COMMD3-210ENST00000472610 SRFBP1Q8NEF9 429 aaKnown RBP16.05■□□□□ 0.16
COMMD3-210ENST00000472610 OR2L5Q8NG80 312 aa16.05■□□□□ 0.16
COMMD3-210ENST00000472610 ISL2Q96A47 359 aa16.05■□□□□ 0.16
COMMD3-210ENST00000472610 LPAR4Q99677 370 aa16.05■□□□□ 0.16
COMMD3-210ENST00000472610 REXO4Q9GZR2 422 aaKnown RBP16.05■□□□□ 0.16
COMMD3-210ENST00000472610 MAP10Q9P2G4 905 aa16.05■□□□□ 0.16
COMMD3-210ENST00000472610 TEKT2Q9UIF3 430 aa16.05■□□□□ 0.16
COMMD3-210ENST00000472610 ANGPTL3Q9Y5C1 460 aa16.05■□□□□ 0.16
COMMD3-210ENST00000472610 SCN2AQ99250 2005 aa16.05■□□□□ 0.16
COMMD3-210ENST00000472610 OR2W5A6NFC9 320 aa16.04■□□□□ 0.16
COMMD3-210ENST00000472610 ERI3O43414 337 aaKnown RBP16.04■□□□□ 0.16
COMMD3-210ENST00000472610 KLK8O60259 260 aa16.04■□□□□ 0.16
COMMD3-210ENST00000472610 PRMT3O60678 531 aa16.04■□□□□ 0.16
COMMD3-210ENST00000472610 B4GALT2O60909 372 aa16.04■□□□□ 0.16
COMMD3-210ENST00000472610 DNAJB6O75190 326 aa16.04■□□□□ 0.16
COMMD3-210ENST00000472610 ABHD2P08910 425 aa16.04■□□□□ 0.16
COMMD3-210ENST00000472610 RBP1P09455 135 aa16.04■□□□□ 0.16
COMMD3-210ENST00000472610 ITGAMP11215 1152 aa16.04■□□□□ 0.16
COMMD3-210ENST00000472610 COL6A2P12110 1019 aa16.04■□□□□ 0.16
COMMD3-210ENST00000472610 GFAPP14136 432 aa16.04■□□□□ 0.16
COMMD3-210ENST00000472610 HNRNPH1P31943 449 aaKnown RBP16.04■□□□□ 0.16
COMMD3-210ENST00000472610 OR4D2P58180 307 aa16.04■□□□□ 0.16
COMMD3-210ENST00000472610 NAA30Q147X3 362 aaPredicted RBP16.04■□□□□ 0.16
COMMD3-210ENST00000472610 ZNF169Q14929 603 aaPredicted RBP16.04■□□□□ 0.16
COMMD3-210ENST00000472610 SETDB1Q15047 1291 aa16.04■□□□□ 0.16
COMMD3-210ENST00000472610 TSNAXIP1Q2TAA8 658 aa16.04■□□□□ 0.16
COMMD3-210ENST00000472610 SFT2D3Q587I9 215 aa16.04■□□□□ 0.16
COMMD3-210ENST00000472610 B3GNTL1Q67FW5 361 aaPredicted RBP16.04■□□□□ 0.16
COMMD3-210ENST00000472610 METTL2BQ6P1Q9 378 aaKnown RBP16.04■□□□□ 0.16
COMMD3-210ENST00000472610 MED27Q6P2C8 311 aa16.04■□□□□ 0.16
COMMD3-210ENST00000472610 CUZD1Q86UP6 607 aa16.04■□□□□ 0.16
COMMD3-210ENST00000472610 CA13Q8N1Q1 262 aa16.04■□□□□ 0.16
COMMD3-210ENST00000472610 SIRT6Q8N6T7 355 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms