RNA–Protein interactions for RNA: ENST00000472518.1

RTKN-207, Transcript of rhotekin, humanhuman

TSL 1 (best)

Gene RTKN, Length 1,105 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTKN-207ENST00000472518 ZNF888P0CJ79 500 aaPredicted RBP13.14□□□□□ -0.31
RTKN-207ENST00000472518 SLC12A2P55011 1212 aa13.14□□□□□ -0.31
RTKN-207ENST00000472518 SNRPNP63162 240 aaKnown RBP13.14□□□□□ -0.31
RTKN-207ENST00000472518 RCN2Q14257 317 aa13.14□□□□□ -0.31
RTKN-207ENST00000472518 OR1C1Q15619 314 aa13.14□□□□□ -0.31
RTKN-207ENST00000472518 ZXDCQ2QGD7 858 aaPredicted RBP13.14□□□□□ -0.31
RTKN-207ENST00000472518 CATSPEREQ5SY80 951 aa13.14□□□□□ -0.31
RTKN-207ENST00000472518 C1QL3Q5VWW1 255 aa13.14□□□□□ -0.31
RTKN-207ENST00000472518 TRMT10BQ6PF06 316 aaKnown RBP13.14□□□□□ -0.31
RTKN-207ENST00000472518 TMPRSS11BQ86T26 416 aa13.14□□□□□ -0.31
RTKN-207ENST00000472518 RPS19BP1Q86WX3 136 aaKnown RBP13.14□□□□□ -0.31
RTKN-207ENST00000472518 CREG2Q8IUH2 290 aa13.14□□□□□ -0.31
RTKN-207ENST00000472518 KLHL7Q8IXQ5 586 aa13.14□□□□□ -0.31
RTKN-207ENST00000472518 KRT78Q8N1N4 520 aa13.14□□□□□ -0.31
RTKN-207ENST00000472518 ARMC10Q8N2F6 343 aa13.14□□□□□ -0.31
RTKN-207ENST00000472518 POGLUT1Q8NBL1 392 aa13.14□□□□□ -0.31
RTKN-207ENST00000472518 UTP15Q8TED0 518 aaKnown RBP13.14□□□□□ -0.31
RTKN-207ENST00000472518 ANP32BQ92688 251 aaKnown RBP13.14□□□□□ -0.31
RTKN-207ENST00000472518 GAL3ST3Q96A11 431 aa13.14□□□□□ -0.31
RTKN-207ENST00000472518 PTCHD1Q96NR3 888 aa13.14□□□□□ -0.31
RTKN-207ENST00000472518 NAPGQ99747 312 aaPredicted RBP13.14□□□□□ -0.31
RTKN-207ENST00000472518 EGFL8Q99944 293 aa13.14□□□□□ -0.31
RTKN-207ENST00000472518 NT5DC2Q9H857 520 aa13.14□□□□□ -0.31
RTKN-207ENST00000472518 TRIM45Q9H8W5 580 aaPredicted RBP13.14□□□□□ -0.31
RTKN-207ENST00000472518 PRDM9Q9NQV7 894 aa13.14□□□□□ -0.31
RTKN-207ENST00000472518 CTNNAL1Q9UBT7 734 aa13.14□□□□□ -0.31
RTKN-207ENST00000472518 MRPS33Q9Y291 106 aaKnown RBP13.14□□□□□ -0.31
RTKN-207ENST00000472518 DNHD1Q96M86 4753 aa13.14□□□□□ -0.31
RTKN-207ENST00000472518 CACNA1CQ13936 2221 aa13.13□□□□□ -0.31
RTKN-207ENST00000472518 NCOA6Q14686 2063 aaPredicted RBP13.13□□□□□ -0.31
RTKN-207ENST00000472518 TCRBV16S1A1N1A0A5B0 115 aa13.13□□□□□ -0.31
RTKN-207ENST00000472518 ZNF860A6NHJ4 632 aa13.13□□□□□ -0.31
RTKN-207ENST00000472518 EFCAB8A8MWE9 144 aa13.13□□□□□ -0.31
RTKN-207ENST00000472518 EIF3HO15372 352 aaKnown RBP eCLIP13.13□□□□□ -0.31
RTKN-207ENST00000472518 SLC19A2O60779 497 aa13.13□□□□□ -0.31
RTKN-207ENST00000472518 CDC123O75794 336 aaPredicted RBP13.13□□□□□ -0.31
RTKN-207ENST00000472518 F10P00742 488 aa13.13□□□□□ -0.31
RTKN-207ENST00000472518 SMIM10L1P0DMW3 83 aa13.13□□□□□ -0.31
RTKN-207ENST00000472518 PRF1P14222 555 aa13.13□□□□□ -0.31
RTKN-207ENST00000472518 CD96P40200 585 aa13.13□□□□□ -0.31
RTKN-207ENST00000472518 CYB561P49447 251 aa13.13□□□□□ -0.31
RTKN-207ENST00000472518 POU4F1Q01851 419 aa13.13□□□□□ -0.31
RTKN-207ENST00000472518 ALDH6A1Q02252 535 aaKnown RBP13.13□□□□□ -0.31
RTKN-207ENST00000472518 PDIA2Q13087 525 aaKnown RBP13.13□□□□□ -0.31
RTKN-207ENST00000472518 SLC25A25Q6KCM7 469 aa13.13□□□□□ -0.31
RTKN-207ENST00000472518 XKRXQ6PP77 449 aa13.13□□□□□ -0.31
RTKN-207ENST00000472518 CYS1Q717R9 158 aa13.13□□□□□ -0.31
RTKN-207ENST00000472518 SRRM1Q8IYB3 904 aaKnown RBP13.13□□□□□ -0.31
RTKN-207ENST00000472518 FBXO36Q8NEA4 188 aa13.13□□□□□ -0.31
RTKN-207ENST00000472518 OR5T3Q8NGG3 340 aa13.13□□□□□ -0.31
RTKN-207ENST00000472518 TSLPQ969D9 159 aa13.13□□□□□ -0.31
RTKN-207ENST00000472518 TMEM125Q96AQ2 219 aa13.13□□□□□ -0.31
RTKN-207ENST00000472518 SMIM10Q96HG1 83 aa13.13□□□□□ -0.31
RTKN-207ENST00000472518 MAGED4Q96JG8 741 aa13.13□□□□□ -0.31
RTKN-207ENST00000472518 FAR2Q96K12 515 aa13.13□□□□□ -0.31
RTKN-207ENST00000472518 GPR137Q96N19 417 aa13.13□□□□□ -0.31
RTKN-207ENST00000472518 WDR83Q9BRX9 315 aaKnown RBP13.13□□□□□ -0.31
RTKN-207ENST00000472518 DERL2Q9GZP9 239 aa13.13□□□□□ -0.31
RTKN-207ENST00000472518 EHD1Q9H4M9 534 aa13.13□□□□□ -0.31
RTKN-207ENST00000472518 GPAMQ9HCL2 828 aa13.13□□□□□ -0.31
RTKN-207ENST00000472518 TRMT1Q9NXH9 659 aaKnown RBP13.13□□□□□ -0.31
RTKN-207ENST00000472518 LRFN1Q9P244 771 aa13.13□□□□□ -0.31
RTKN-207ENST00000472518 TXNDC16Q9P2K2 825 aa13.13□□□□□ -0.31
RTKN-207ENST00000472518 SLC17A6Q9P2U8 582 aa13.13□□□□□ -0.31
RTKN-207ENST00000472518 SLC22A14Q9Y267 594 aa13.13□□□□□ -0.31
RTKN-207ENST00000472518 IGKV3D-11A0A0A0MRZ8 115 aa13.12□□□□□ -0.31
RTKN-207ENST00000472518 PRSS44E7EML9 344 aa13.12□□□□□ -0.31
RTKN-207ENST00000472518 CCL21O00585 134 aa13.12□□□□□ -0.31
RTKN-207ENST00000472518 CLDN4O14493 209 aa13.12□□□□□ -0.31
RTKN-207ENST00000472518 SP1P08047 785 aa13.12□□□□□ -0.31
RTKN-207ENST00000472518 C1GALT1C1LP0DN25 315 aa13.12□□□□□ -0.31
RTKN-207ENST00000472518 MST1P26927 711 aa13.12□□□□□ -0.31
RTKN-207ENST00000472518 TRHRP34981 398 aaPredicted RBP13.12□□□□□ -0.31
RTKN-207ENST00000472518 PTGER4P35408 488 aa13.12□□□□□ -0.31
RTKN-207ENST00000472518 SLC6A12P48065 614 aa13.12□□□□□ -0.31
RTKN-207ENST00000472518 SMSP52788 366 aa13.12□□□□□ -0.31
RTKN-207ENST00000472518 ATP6V0D1P61421 351 aa13.12□□□□□ -0.31
RTKN-207ENST00000472518 GNG11P61952 73 aa13.12□□□□□ -0.31
RTKN-207ENST00000472518 OC90Q02509 493 aaPredicted RBP13.12□□□□□ -0.31
RTKN-207ENST00000472518 CALCOCO2Q13137 446 aa13.12□□□□□ -0.31
RTKN-207ENST00000472518 RBBP5Q15291 538 aaKnown RBP13.12□□□□□ -0.31
RTKN-207ENST00000472518 TMIGD1Q6UXZ0 262 aa13.12□□□□□ -0.31
RTKN-207ENST00000472518 BNC2Q6ZN30 1099 aaPredicted RBP13.12□□□□□ -0.31
RTKN-207ENST00000472518 Q6ZPB1 254 aaPredicted RBP13.12□□□□□ -0.31
RTKN-207ENST00000472518 ANKRD53Q8N9V6 530 aa13.12□□□□□ -0.31
RTKN-207ENST00000472518 MARVELD3Q96A59 401 aa13.12□□□□□ -0.31
RTKN-207ENST00000472518 MOCOSQ96EN8 888 aa13.12□□□□□ -0.31
RTKN-207ENST00000472518 CCDC120Q96HB5 630 aa13.12□□□□□ -0.31
RTKN-207ENST00000472518 CAPZA3Q96KX2 299 aa13.12□□□□□ -0.31
RTKN-207ENST00000472518 TSNARE1Q96NA8 513 aa13.12□□□□□ -0.31
RTKN-207ENST00000472518 RBCK1Q9BYM8 510 aa13.12□□□□□ -0.31
RTKN-207ENST00000472518 PHACTR1Q9C0D0 580 aa13.12□□□□□ -0.31
RTKN-207ENST00000472518 NPEPPSL1A6NEC2 478 aa13.11□□□□□ -0.31
RTKN-207ENST00000472518 CDC7O00311 574 aa13.11□□□□□ -0.31
RTKN-207ENST00000472518 NME2P1O60361 137 aa13.11□□□□□ -0.31
RTKN-207ENST00000472518 B4GALT2O60909 372 aa13.11□□□□□ -0.31
RTKN-207ENST00000472518 CLEC3AO75596 197 aa13.11□□□□□ -0.31
RTKN-207ENST00000472518 SLC25A12O75746 678 aa13.11□□□□□ -0.31
RTKN-207ENST00000472518 NEURL1O76050 574 aa13.11□□□□□ -0.31
RTKN-207ENST00000472518 GSTA2P09210 222 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms