RNA–Protein interactions for RNA: ENST00000472044.1

PTCD3-209, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-209ENST00000472044 POMT2Q9UKY4 750 aa3.27□□□□□ -1.89
PTCD3-209ENST00000472044 EXOGQ9Y2C4 368 aaKnown RBP3.27□□□□□ -1.89
PTCD3-209ENST00000472044 WIPI2Q9Y4P8 454 aa3.27□□□□□ -1.89
PTCD3-209ENST00000472044 CSNK1G3Q9Y6M4 447 aa3.27□□□□□ -1.89
PTCD3-209ENST00000472044 RNF123Q5XPI4 1314 aa3.26□□□□□ -1.89
PTCD3-209ENST00000472044 LOC105371242A0A075B767 164 aa3.26□□□□□ -1.89
PTCD3-209ENST00000472044 hCG_38984A0A1B0GV85 526 aa3.26□□□□□ -1.89
PTCD3-209ENST00000472044 ZNF732B4DXR9 585 aa3.26□□□□□ -1.89
PTCD3-209ENST00000472044 MAGEB2O15479 319 aa3.26□□□□□ -1.89
PTCD3-209ENST00000472044 MLNRO43193 412 aa3.26□□□□□ -1.89
PTCD3-209ENST00000472044 ARHGEF9O43307 516 aa3.26□□□□□ -1.89
PTCD3-209ENST00000472044 AKAP3O75969 853 aa3.26□□□□□ -1.89
PTCD3-209ENST00000472044 CLDN1O95832 211 aa3.26□□□□□ -1.89
PTCD3-209ENST00000472044 SERPINB6P35237 376 aa3.26□□□□□ -1.89
PTCD3-209ENST00000472044 MMP12P39900 470 aa3.26□□□□□ -1.89
PTCD3-209ENST00000472044 SLC3A1Q07837 685 aa3.26□□□□□ -1.89
PTCD3-209ENST00000472044 TEFQ10587 303 aa3.26□□□□□ -1.89
PTCD3-209ENST00000472044 GPR50Q13585 617 aa3.26□□□□□ -1.89
PTCD3-209ENST00000472044 RPS6KA1Q15418 735 aa3.26□□□□□ -1.89
PTCD3-209ENST00000472044 STXBP2Q15833 593 aa3.26□□□□□ -1.89
PTCD3-209ENST00000472044 ACKR1Q16570 336 aa3.26□□□□□ -1.89
PTCD3-209ENST00000472044 SGCBQ16585 318 aa3.26□□□□□ -1.89
PTCD3-209ENST00000472044 C2orf76Q3KRA6 126 aa3.26□□□□□ -1.89
PTCD3-209ENST00000472044 SPANXN4Q5MJ08 99 aa3.26□□□□□ -1.89
PTCD3-209ENST00000472044 OTUD3Q5T2D3 398 aaPredicted RBP3.26□□□□□ -1.89
PTCD3-209ENST00000472044 PLPP4Q5VZY2 271 aa3.26□□□□□ -1.89
PTCD3-209ENST00000472044 BSPRYQ5W0U4 402 aa3.26□□□□□ -1.89
PTCD3-209ENST00000472044 SIGLEC15Q6ZMC9 328 aa3.26□□□□□ -1.89
PTCD3-209ENST00000472044 CHMP1BQ7LBR1 199 aa3.26□□□□□ -1.89
PTCD3-209ENST00000472044 ASPGQ86U10 573 aa3.26□□□□□ -1.89
PTCD3-209ENST00000472044 SNX32Q86XE0 403 aa3.26□□□□□ -1.89
PTCD3-209ENST00000472044 ZNF444Q8N0Y2 327 aaPredicted RBP3.26□□□□□ -1.89
PTCD3-209ENST00000472044 ZNF713Q8N859 430 aaPredicted RBP3.26□□□□□ -1.89
PTCD3-209ENST00000472044 MSANTD4Q8NCY6 345 aa3.26□□□□□ -1.89
PTCD3-209ENST00000472044 ZNF519Q8TB69 540 aa3.26□□□□□ -1.89
PTCD3-209ENST00000472044 AP2M1Q96CW1 435 aa3.26□□□□□ -1.89
PTCD3-209ENST00000472044 EPSTI1Q96J88 318 aa3.26□□□□□ -1.89
PTCD3-209ENST00000472044 POM121L2Q96KW2 1035 aa3.26□□□□□ -1.89
PTCD3-209ENST00000472044 CCDC43Q96MW1 224 aaKnown RBP3.26□□□□□ -1.89
PTCD3-209ENST00000472044 PCDHB18PQ96TA0 734 aa3.26□□□□□ -1.89
PTCD3-209ENST00000472044 PAPOLGQ9BWT3 736 aaKnown RBP3.26□□□□□ -1.89
PTCD3-209ENST00000472044 DPEP2Q9H4A9 486 aa3.26□□□□□ -1.89
PTCD3-209ENST00000472044 VIPAS39Q9H9C1 493 aa3.26□□□□□ -1.89
PTCD3-209ENST00000472044 MAGEF1Q9HAY2 307 aa3.26□□□□□ -1.89
PTCD3-209ENST00000472044 TRPC4Q9UBN4 977 aa3.26□□□□□ -1.89
PTCD3-209ENST00000472044 ASIC3Q9UHC3 531 aa3.26□□□□□ -1.89
PTCD3-209ENST00000472044 LNPEPQ9UIQ6 1025 aa3.26□□□□□ -1.89
PTCD3-209ENST00000472044 STX8Q9UNK0 236 aa3.26□□□□□ -1.89
PTCD3-209ENST00000472044 NCKAP1Q9Y2A7 1128 aa3.26□□□□□ -1.89
PTCD3-209ENST00000472044 ZNF510Q9Y2H8 683 aa3.26□□□□□ -1.89
PTCD3-209ENST00000472044 A0A0A6YYC8 382 aaPredicted RBP3.25□□□□□ -1.89
PTCD3-209ENST00000472044 A0A1W2PRV1 198 aa3.25□□□□□ -1.89
PTCD3-209ENST00000472044 I3L1I5 382 aaPredicted RBP3.25□□□□□ -1.89
PTCD3-209ENST00000472044 TLX2O43763 284 aaPredicted RBP3.25□□□□□ -1.89
PTCD3-209ENST00000472044 KINO60870 393 aaKnown RBP3.25□□□□□ -1.89
PTCD3-209ENST00000472044 BAG2O95816 211 aa3.25□□□□□ -1.89
PTCD3-209ENST00000472044 C4BPBP20851 252 aa3.25□□□□□ -1.89
PTCD3-209ENST00000472044 PRKACGP22612 351 aa3.25□□□□□ -1.89
PTCD3-209ENST00000472044 CTNNA2P26232 953 aa3.25□□□□□ -1.89
PTCD3-209ENST00000472044 CTNNB1P35222 781 aa3.25□□□□□ -1.89
PTCD3-209ENST00000472044 FEN1P39748 380 aaKnown RBP3.25□□□□□ -1.89
PTCD3-209ENST00000472044 SERPINH1P50454 418 aaKnown RBP3.25□□□□□ -1.89
PTCD3-209ENST00000472044 ZNF776Q68DI1 518 aaPredicted RBP3.25□□□□□ -1.89
PTCD3-209ENST00000472044 FAAP20Q6NZ36 180 aa3.25□□□□□ -1.89
PTCD3-209ENST00000472044 TRIM65Q6PJ69 517 aa3.25□□□□□ -1.89
PTCD3-209ENST00000472044 GSG1LQ6UXU4 331 aa3.25□□□□□ -1.89
PTCD3-209ENST00000472044 KIF6Q6ZMV9 814 aa3.25□□□□□ -1.89
PTCD3-209ENST00000472044 PRSS42Q7Z5A4 293 aa3.25□□□□□ -1.89
PTCD3-209ENST00000472044 ZER1Q7Z7L7 766 aa3.25□□□□□ -1.89
PTCD3-209ENST00000472044 LAX1Q8IWV1 398 aa3.25□□□□□ -1.89
PTCD3-209ENST00000472044 NAT8LQ8N9F0 302 aa3.25□□□□□ -1.89
PTCD3-209ENST00000472044 LPCAT1Q8NF37 534 aa3.25□□□□□ -1.89
PTCD3-209ENST00000472044 NUP37Q8NFH4 326 aa3.25□□□□□ -1.89
PTCD3-209ENST00000472044 SEPT8Q92599 483 aa3.25□□□□□ -1.89
PTCD3-209ENST00000472044 WBP2Q969T9 261 aa3.25□□□□□ -1.89
PTCD3-209ENST00000472044 CABS1Q96KC9 395 aa3.25□□□□□ -1.89
PTCD3-209ENST00000472044 DGCR6LQ9BY27 220 aa3.25□□□□□ -1.89
PTCD3-209ENST00000472044 MRPL9Q9BYD2 267 aaKnown RBP3.25□□□□□ -1.89
PTCD3-209ENST00000472044 FGFBP2Q9BYJ0 223 aa3.25□□□□□ -1.89
PTCD3-209ENST00000472044 OSBPL8Q9BZF1 889 aa3.25□□□□□ -1.89
PTCD3-209ENST00000472044 TSPYL1Q9H0U9 437 aa3.25□□□□□ -1.89
PTCD3-209ENST00000472044 AKIRIN1Q9H9L7 192 aaPredicted RBP3.25□□□□□ -1.89
PTCD3-209ENST00000472044 MID1IP1Q9NPA3 183 aa3.25□□□□□ -1.89
PTCD3-209ENST00000472044 TMOD3Q9NYL9 352 aa3.25□□□□□ -1.89
PTCD3-209ENST00000472044 MAD2L2Q9UI95 211 aa3.25□□□□□ -1.89
PTCD3-209ENST00000472044 FBXW2Q9UKT8 454 aa3.25□□□□□ -1.89
PTCD3-209ENST00000472044 TMED7Q9Y3B3 224 aa3.25□□□□□ -1.89
PTCD3-209ENST00000472044 UMODL1Q5DID0 1318 aa3.24□□□□□ -1.89
PTCD3-209ENST00000472044 IGLV7-46A0A075B6I9 117 aa3.24□□□□□ -1.89
PTCD3-209ENST00000472044 IQCMA0A1B0GVH7 501 aa3.24□□□□□ -1.89
PTCD3-209ENST00000472044 MEX3AA1L020 520 aaKnown RBP3.24□□□□□ -1.89
PTCD3-209ENST00000472044 SMIM30A4D0T7 59 aa3.24□□□□□ -1.89
PTCD3-209ENST00000472044 KPNA7A9QM74 516 aa3.24□□□□□ -1.89
PTCD3-209ENST00000472044 LMO7DNF2Z398 122 aa3.24□□□□□ -1.89
PTCD3-209ENST00000472044 K7EQD1 137 aa3.24□□□□□ -1.89
PTCD3-209ENST00000472044 CACNB4O00305 520 aaPredicted RBP3.24□□□□□ -1.89
PTCD3-209ENST00000472044 P2RX6O15547 441 aa3.24□□□□□ -1.89
PTCD3-209ENST00000472044 ECE2O60344 883 aa3.24□□□□□ -1.89
PTCD3-209ENST00000472044 PNPP00491 289 aa3.24□□□□□ -1.89
PTCD3-209ENST00000472044 ZSCAN5DPP0CG00 497 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms