RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 MOCS1Q9NZB8 636 aa7.58□□□□□ -1.2
USP48-207ENST00000471752 TINAGQ9UJW2 476 aa7.58□□□□□ -1.2
USP48-207ENST00000471752 ZNF223Q9UK11 482 aaPredicted RBP7.58□□□□□ -1.2
USP48-207ENST00000471752 ZNF490Q9ULM2 529 aaPredicted RBP7.58□□□□□ -1.2
USP48-207ENST00000471752 SLC22A7Q9Y694 548 aa7.58□□□□□ -1.2
USP48-207ENST00000471752 FAM95CA0A1B0GW59 222 aa7.57□□□□□ -1.2
USP48-207ENST00000471752 TRBC2A0A5B9 178 aa7.57□□□□□ -1.2
USP48-207ENST00000471752 TMEM200CA6NKL6 621 aa7.57□□□□□ -1.2
USP48-207ENST00000471752 WASHC1A8K0Z3 465 aa7.57□□□□□ -1.2
USP48-207ENST00000471752 EIF3FO00303 357 aaPredicted RBP7.57□□□□□ -1.2
USP48-207ENST00000471752 TXNDC9O14530 226 aa7.57□□□□□ -1.2
USP48-207ENST00000471752 PHGDHO43175 533 aaKnown RBP7.57□□□□□ -1.2
USP48-207ENST00000471752 KLHL41O60662 606 aa7.57□□□□□ -1.2
USP48-207ENST00000471752 ZNF354AO60765 605 aaPredicted RBP7.57□□□□□ -1.2
USP48-207ENST00000471752 RASAL1O95294 804 aa7.57□□□□□ -1.2
USP48-207ENST00000471752 TTC4O95801 387 aa7.57□□□□□ -1.2
USP48-207ENST00000471752 EPORP19235 508 aa7.57□□□□□ -1.2
USP48-207ENST00000471752 CD22P20273 847 aa7.57□□□□□ -1.2
USP48-207ENST00000471752 SSTR1P30872 391 aa7.57□□□□□ -1.2
USP48-207ENST00000471752 RGS4P49798 205 aa7.57□□□□□ -1.2
USP48-207ENST00000471752 GPX6P59796 221 aa7.57□□□□□ -1.2
USP48-207ENST00000471752 KRTAP10-9P60411 292 aa7.57□□□□□ -1.2
USP48-207ENST00000471752 BTN3A2P78410 334 aa7.57□□□□□ -1.2
USP48-207ENST00000471752 REEP5Q00765 189 aa7.57□□□□□ -1.2
USP48-207ENST00000471752 ACTN3Q08043 901 aaPredicted RBP7.57□□□□□ -1.2
USP48-207ENST00000471752 DLG1Q12959 904 aa7.57□□□□□ -1.2
USP48-207ENST00000471752 SP140Q13342 867 aa7.57□□□□□ -1.2
USP48-207ENST00000471752 CSHL1Q14406 222 aa7.57□□□□□ -1.2
USP48-207ENST00000471752 RBBP5Q15291 538 aaKnown RBP7.57□□□□□ -1.2
USP48-207ENST00000471752 OR4D1Q15615 310 aa7.57□□□□□ -1.2
USP48-207ENST00000471752 TOR1AIP1Q5JTV8 583 aa7.57□□□□□ -1.2
USP48-207ENST00000471752 SLCO4C1Q6ZQN7 724 aa7.57□□□□□ -1.2
USP48-207ENST00000471752 RIPOR1Q6ZS17 1223 aa7.57□□□□□ -1.2
USP48-207ENST00000471752 KIAA0408Q6ZU52 694 aa7.57□□□□□ -1.2
USP48-207ENST00000471752 GALNTL5Q7Z4T8 443 aa7.57□□□□□ -1.2
USP48-207ENST00000471752 UBE3DQ7Z6J8 389 aa7.57□□□□□ -1.2
USP48-207ENST00000471752 CA13Q8N1Q1 262 aa7.57□□□□□ -1.2
USP48-207ENST00000471752 M1APQ8TC57 530 aa7.57□□□□□ -1.2
USP48-207ENST00000471752 NT5CQ8TCD5 201 aa7.57□□□□□ -1.2
USP48-207ENST00000471752 ELP5Q8TE02 316 aa7.57□□□□□ -1.2
USP48-207ENST00000471752 TBC1D20Q96BZ9 403 aa7.57□□□□□ -1.2
USP48-207ENST00000471752 KCTD12Q96CX2 325 aaKnown RBP7.57□□□□□ -1.2
USP48-207ENST00000471752 THAP11Q96EK4 314 aa7.57□□□□□ -1.2
USP48-207ENST00000471752 PDLIM5Q96HC4 596 aaKnown RBP7.57□□□□□ -1.2
USP48-207ENST00000471752 NAP1L3Q99457 506 aaPredicted RBP7.57□□□□□ -1.2
USP48-207ENST00000471752 TMEM79Q9BSE2 394 aa7.57□□□□□ -1.2
USP48-207ENST00000471752 SLC6A16Q9GZN6 736 aa7.57□□□□□ -1.2
USP48-207ENST00000471752 DPH5Q9H2P9 285 aa7.57□□□□□ -1.2
USP48-207ENST00000471752 MMP25Q9NPA2 562 aa7.57□□□□□ -1.2
USP48-207ENST00000471752 ZFATQ9P243 1243 aa7.57□□□□□ -1.2
USP48-207ENST00000471752 ABI3Q9P2A4 366 aa7.57□□□□□ -1.2
USP48-207ENST00000471752 ZFP69BQ9UJL9 534 aa7.57□□□□□ -1.2
USP48-207ENST00000471752 NIPBLQ6KC79 2804 aaeCLIP7.56□□□□□ -1.24e-7■□□□□ 8.4
USP48-207ENST00000471752 IGKV3D-11A0A0A0MRZ8 115 aa7.56□□□□□ -1.2
USP48-207ENST00000471752 GOLGA6L10A0A0M3HER8 536 aa7.56□□□□□ -1.2
USP48-207ENST00000471752 PINLYPA6NC86 204 aa7.56□□□□□ -1.2
USP48-207ENST00000471752 GABRR3A8MPY1 467 aa7.56□□□□□ -1.2
USP48-207ENST00000471752 MAGEB17A8MXT2 336 aa7.56□□□□□ -1.2
USP48-207ENST00000471752 PRSS44E7EML9 344 aa7.56□□□□□ -1.2
USP48-207ENST00000471752 E7ESA3 106 aa7.56□□□□□ -1.2
USP48-207ENST00000471752 NPIPA5E9PKD4 350 aa7.56□□□□□ -1.2
USP48-207ENST00000471752 CCL21O00585 134 aa7.56□□□□□ -1.2
USP48-207ENST00000471752 CES2O00748 559 aa7.56□□□□□ -1.2
USP48-207ENST00000471752 ADAM10O14672 748 aa7.56□□□□□ -1.2
USP48-207ENST00000471752 NDC80O14777 642 aa7.56□□□□□ -1.2
USP48-207ENST00000471752 PRPF4O43172 522 aaKnown RBP eCLIP7.56□□□□□ -1.2
USP48-207ENST00000471752 PRMT3O60678 531 aa7.56□□□□□ -1.2
USP48-207ENST00000471752 UQCRHP07919 91 aa7.56□□□□□ -1.2
USP48-207ENST00000471752 HIST1H2AGP0C0S8 130 aaPredicted RBP7.56□□□□□ -1.2
USP48-207ENST00000471752 ZNF37AP17032 561 aaPredicted RBP7.56□□□□□ -1.2
USP48-207ENST00000471752 HIST1H2ADP20671 130 aa7.56□□□□□ -1.2
USP48-207ENST00000471752 HRH2P25021 359 aa7.56□□□□□ -1.2
USP48-207ENST00000471752 TPP2P29144 1249 aaPredicted RBP7.56□□□□□ -1.2
USP48-207ENST00000471752 KIR3DL1P43629 444 aa7.56□□□□□ -1.2
USP48-207ENST00000471752 SLC6A12P48065 614 aa7.56□□□□□ -1.2
USP48-207ENST00000471752 GPR143P51810 404 aa7.56□□□□□ -1.2
USP48-207ENST00000471752 MGAT5Q09328 741 aa7.56□□□□□ -1.2
USP48-207ENST00000471752 PWP1Q13610 501 aa7.56□□□□□ -1.2
USP48-207ENST00000471752 NAA25Q14CX7 972 aa7.56□□□□□ -1.2
USP48-207ENST00000471752 MORF4L2Q15014 288 aa7.56□□□□□ -1.2
USP48-207ENST00000471752 XKR6Q5GH73 641 aa7.56□□□□□ -1.2
USP48-207ENST00000471752 MDGA2Q7Z553 956 aa7.56□□□□□ -1.2
USP48-207ENST00000471752 CLNKQ7Z7G1 428 aa7.56□□□□□ -1.2
USP48-207ENST00000471752 GALNT7Q86SF2 657 aa7.56□□□□□ -1.2
USP48-207ENST00000471752 TMPRSS11BQ86T26 416 aa7.56□□□□□ -1.2
USP48-207ENST00000471752 RPS19BP1Q86WX3 136 aaKnown RBP7.56□□□□□ -1.2
USP48-207ENST00000471752 PALM2Q8IXS6 379 aa7.56□□□□□ -1.2
USP48-207ENST00000471752 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.56□□□□□ -1.25e-6■■■■■ 55.7
USP48-207ENST00000471752 ZBED8Q8IZ13 594 aa7.56□□□□□ -1.2
USP48-207ENST00000471752 PDIK1LQ8N165 341 aa7.56□□□□□ -1.2
USP48-207ENST00000471752 CPSF7Q8N684 471 aaKnown RBP7.56□□□□□ -1.2
USP48-207ENST00000471752 UCN3Q969E3 161 aa7.56□□□□□ -1.2
USP48-207ENST00000471752 RHBDF1Q96CC6 855 aa7.56□□□□□ -1.2
USP48-207ENST00000471752 SCMH1Q96GD3 660 aa7.56□□□□□ -1.2
USP48-207ENST00000471752 HIST1H2AHQ96KK5 128 aa7.56□□□□□ -1.2
USP48-207ENST00000471752 ZNF354BQ96LW1 612 aa7.56□□□□□ -1.2
USP48-207ENST00000471752 QRFPRQ96P65 431 aa7.56□□□□□ -1.2
USP48-207ENST00000471752 CSF3RQ99062 836 aa7.56□□□□□ -1.2
USP48-207ENST00000471752 HIST1H2AJQ99878 128 aa7.56□□□□□ -1.2
USP48-207ENST00000471752 H2AFJQ9BTM1 129 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms