RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 UNC50Q53HI1 259 aa14.46□□□□□ -0.09
SDC3-203ENST00000471567 ZNF678Q5SXM1 525 aa14.46□□□□□ -0.09
SDC3-203ENST00000471567 C10orf62Q5T681 223 aaPredicted RBP14.46□□□□□ -0.09
SDC3-203ENST00000471567 TRIM40Q6P9F5 258 aa14.46□□□□□ -0.09
SDC3-203ENST00000471567 ZYG11AQ6WRX3 759 aa14.46□□□□□ -0.09
SDC3-203ENST00000471567 SHISA6Q6ZSJ9 500 aa14.46□□□□□ -0.09
SDC3-203ENST00000471567 CHSY3Q70JA7 882 aa14.46□□□□□ -0.09
SDC3-203ENST00000471567 LAPTM4BQ86VI4 370 aa14.46□□□□□ -0.09
SDC3-203ENST00000471567 C4orf33Q8N1A6 199 aa14.46□□□□□ -0.09
SDC3-203ENST00000471567 OR52B6Q8NGF0 335 aa14.46□□□□□ -0.09
SDC3-203ENST00000471567 PPP4R1Q8TF05 950 aa14.46□□□□□ -0.09
SDC3-203ENST00000471567 L3HYPDHQ96EM0 354 aa14.46□□□□□ -0.09
SDC3-203ENST00000471567 CMTM7Q96FZ5 175 aa14.46□□□□□ -0.09
SDC3-203ENST00000471567 FAR2Q96K12 515 aa14.46□□□□□ -0.09
SDC3-203ENST00000471567 FER1L6-AS2Q96M78 137 aa14.46□□□□□ -0.09
SDC3-203ENST00000471567 NSUN5Q96P11 429 aaKnown RBP14.46□□□□□ -0.09
SDC3-203ENST00000471567 OR1F2PQ96R84 312 aa14.46□□□□□ -0.09
SDC3-203ENST00000471567 NPLQ9BXD5 320 aaPredicted RBP14.46□□□□□ -0.09
SDC3-203ENST00000471567 MS4A8Q9BY19 250 aa14.46□□□□□ -0.09
SDC3-203ENST00000471567 REXO4Q9GZR2 422 aaKnown RBP14.46□□□□□ -0.09
SDC3-203ENST00000471567 SEMA4BQ9NPR2 832 aaPredicted RBP14.46□□□□□ -0.09
SDC3-203ENST00000471567 P4HTMQ9NXG6 502 aa14.46□□□□□ -0.09
SDC3-203ENST00000471567 PSD3Q9NYI0 1048 aa14.46□□□□□ -0.09
SDC3-203ENST00000471567 HCN3Q9P1Z3 774 aa14.46□□□□□ -0.09
SDC3-203ENST00000471567 TUBD1Q9UJT1 453 aa14.46□□□□□ -0.09
SDC3-203ENST00000471567 MID2Q9UJV3 735 aa14.46□□□□□ -0.09
SDC3-203ENST00000471567 C3orf18Q9UK00 162 aa14.46□□□□□ -0.09
SDC3-203ENST00000471567 RNF11Q9Y3C5 154 aa14.46□□□□□ -0.09
SDC3-203ENST00000471567 IDSB3KWA1 339 aa14.45□□□□□ -0.1
SDC3-203ENST00000471567 G3V2L1 256 aa14.45□□□□□ -0.1
SDC3-203ENST00000471567 AGPSO00116 658 aa14.45□□□□□ -0.1
SDC3-203ENST00000471567 FFAR3O14843 346 aa14.45□□□□□ -0.1
SDC3-203ENST00000471567 GPR42O15529 346 aa14.45□□□□□ -0.1
SDC3-203ENST00000471567 ERI3O43414 337 aaKnown RBP14.45□□□□□ -0.1
SDC3-203ENST00000471567 CHST10O43529 356 aa14.45□□□□□ -0.1
SDC3-203ENST00000471567 SUPT7LO94864 414 aa14.45□□□□□ -0.1
SDC3-203ENST00000471567 HEXBP07686 556 aa14.45□□□□□ -0.1
SDC3-203ENST00000471567 ARL1P40616 181 aaPredicted RBP14.45□□□□□ -0.1
SDC3-203ENST00000471567 XCR1P46094 333 aa14.45□□□□□ -0.1
SDC3-203ENST00000471567 BTN3A2P78410 334 aa14.45□□□□□ -0.1
SDC3-203ENST00000471567 CLCQ05315 142 aa14.45□□□□□ -0.1
SDC3-203ENST00000471567 TRAF3Q13114 568 aa14.45□□□□□ -0.1
SDC3-203ENST00000471567 RBBP7Q16576 425 aa14.45□□□□□ -0.1
SDC3-203ENST00000471567 CPSF6Q16630 551 aaKnown RBP eCLIP14.45□□□□□ -0.1
SDC3-203ENST00000471567 KRT71Q3SY84 523 aa14.45□□□□□ -0.1
SDC3-203ENST00000471567 GGTA1PQ4G0N0 100 aa14.45□□□□□ -0.1
SDC3-203ENST00000471567 ADNP2Q6IQ32 1131 aa14.45□□□□□ -0.1
SDC3-203ENST00000471567 ABHD17CQ6PCB6 329 aa14.45□□□□□ -0.1
SDC3-203ENST00000471567 MILR1Q7Z6M3 343 aa14.45□□□□□ -0.1
SDC3-203ENST00000471567 TMEM151BQ8IW70 566 aa14.45□□□□□ -0.1
SDC3-203ENST00000471567 SRRM1Q8IYB3 904 aaKnown RBP14.45□□□□□ -0.1
SDC3-203ENST00000471567 PRSS58Q8IYP2 241 aa14.45□□□□□ -0.1
SDC3-203ENST00000471567 BANPQ8N9N5 519 aa14.45□□□□□ -0.1
SDC3-203ENST00000471567 MYRIPQ8NFW9 859 aa14.45□□□□□ -0.1
SDC3-203ENST00000471567 HUS1BQ8NHY5 278 aa14.45□□□□□ -0.1
SDC3-203ENST00000471567 APOPT1Q96IL0 206 aa14.45□□□□□ -0.1
SDC3-203ENST00000471567 QRFPRQ96P65 431 aa14.45□□□□□ -0.1
SDC3-203ENST00000471567 TMEM237Q96Q45 408 aa14.45□□□□□ -0.1
SDC3-203ENST00000471567 ROGDIQ9GZN7 287 aa14.45□□□□□ -0.1
SDC3-203ENST00000471567 IQCGQ9H095 443 aaKnown RBP14.45□□□□□ -0.1
SDC3-203ENST00000471567 ING2Q9H160 280 aa14.45□□□□□ -0.1
SDC3-203ENST00000471567 ACSS2Q9NR19 701 aa14.45□□□□□ -0.1
SDC3-203ENST00000471567 SCN3AQ9NY46 2000 aa14.45□□□□□ -0.1
SDC3-203ENST00000471567 SENP1Q9P0U3 644 aa14.45□□□□□ -0.1
SDC3-203ENST00000471567 PPT2Q9UMR5 302 aa14.45□□□□□ -0.1
SDC3-203ENST00000471567 STK38LQ9Y2H1 464 aa14.45□□□□□ -0.1
SDC3-203ENST00000471567 PLLPQ9Y342 182 aa14.45□□□□□ -0.1
SDC3-203ENST00000471567 HS3ST3B1Q9Y662 390 aa14.45□□□□□ -0.1
SDC3-203ENST00000471567 ZNF860A6NHJ4 632 aa14.44□□□□□ -0.1
SDC3-203ENST00000471567 ARGFXA6NJG6 315 aa14.44□□□□□ -0.1
SDC3-203ENST00000471567 C4orf51C9J302 202 aa14.44□□□□□ -0.1
SDC3-203ENST00000471567 FOXE1O00358 373 aaPredicted RBP14.44□□□□□ -0.1
SDC3-203ENST00000471567 SOCS6O14544 535 aa14.44□□□□□ -0.1
SDC3-203ENST00000471567 MLYCDO95822 493 aa14.44□□□□□ -0.1
SDC3-203ENST00000471567 B3GALT4O96024 378 aa14.44□□□□□ -0.1
SDC3-203ENST00000471567 CPA3P15088 417 aa14.44□□□□□ -0.1
SDC3-203ENST00000471567 PTX3P26022 381 aaPredicted RBP14.44□□□□□ -0.1
SDC3-203ENST00000471567 ARFIP1P53367 373 aa14.44□□□□□ -0.1
SDC3-203ENST00000471567 PLA2G16P53816 162 aa14.44□□□□□ -0.1
SDC3-203ENST00000471567 CDH13P55290 713 aa14.44□□□□□ -0.1
SDC3-203ENST00000471567 DNAJB13P59910 316 aa14.44□□□□□ -0.1
SDC3-203ENST00000471567 ZRSR2Q15696 482 aaKnown RBP14.44□□□□□ -0.1
SDC3-203ENST00000471567 TUBB8Q3ZCM7 444 aa14.44□□□□□ -0.1
SDC3-203ENST00000471567 DEPDC1Q5TB30 811 aa14.44□□□□□ -0.1
SDC3-203ENST00000471567 LRIG3Q6UXM1 1119 aa14.44□□□□□ -0.1
SDC3-203ENST00000471567 EXD3Q8N9H8 876 aa14.44□□□□□ -0.1
SDC3-203ENST00000471567 OR4F6Q8NGB9 312 aa14.44□□□□□ -0.1
SDC3-203ENST00000471567 OR5T3Q8NGG3 340 aa14.44□□□□□ -0.1
SDC3-203ENST00000471567 WDR20Q8TBZ3 569 aa14.44□□□□□ -0.1
SDC3-203ENST00000471567 TBC1D20Q96BZ9 403 aa14.44□□□□□ -0.1
SDC3-203ENST00000471567 KCNC2Q96PR1 638 aa14.44□□□□□ -0.1
SDC3-203ENST00000471567 CDK15Q96Q40 435 aa14.44□□□□□ -0.1
SDC3-203ENST00000471567 F2RL3Q96RI0 385 aa14.44□□□□□ -0.1
SDC3-203ENST00000471567 SERINC2Q96SA4 455 aa14.44□□□□□ -0.1
SDC3-203ENST00000471567 SMC6Q96SB8 1091 aa14.44□□□□□ -0.1
SDC3-203ENST00000471567 TBCDQ9BTW9 1192 aa14.44□□□□□ -0.1
SDC3-203ENST00000471567 PRM3Q9NNZ6 103 aa14.44□□□□□ -0.1
SDC3-203ENST00000471567 MKL2Q9ULH7 1088 aa14.44□□□□□ -0.1
SDC3-203ENST00000471567 LOC400499M0QZD8 3231 aa14.44□□□□□ -0.1
SDC3-203ENST00000471567 NBEAQ8NFP9 2946 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms