RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 CHRNB4P30926 498 aa8.56□□□□□ -1.04
CPSF4-211ENST00000471455 PTGS2P35354 604 aa8.56□□□□□ -1.04
CPSF4-211ENST00000471455 KIR3DL1P43629 444 aa8.56□□□□□ -1.04
CPSF4-211ENST00000471455 RGS4P49798 205 aa8.56□□□□□ -1.04
CPSF4-211ENST00000471455 EFNA3P52797 238 aa8.56□□□□□ -1.04
CPSF4-211ENST00000471455 CSNK1G2P78368 415 aa8.56□□□□□ -1.04
CPSF4-211ENST00000471455 SP140Q13342 867 aa8.56□□□□□ -1.04
CPSF4-211ENST00000471455 RPS6KA1Q15418 735 aa8.56□□□□□ -1.04
CPSF4-211ENST00000471455 UGT3A1Q6NUS8 523 aa8.56□□□□□ -1.04
CPSF4-211ENST00000471455 UBE2R2Q712K3 238 aaPredicted RBP8.56□□□□□ -1.04
CPSF4-211ENST00000471455 DOLPP1Q86YN1 238 aa8.56□□□□□ -1.04
CPSF4-211ENST00000471455 ACBD4Q8NC06 268 aa8.56□□□□□ -1.04
CPSF4-211ENST00000471455 CALML6Q8TD86 181 aa8.56□□□□□ -1.04
CPSF4-211ENST00000471455 SLC13A3Q8WWT9 602 aa8.56□□□□□ -1.04
CPSF4-211ENST00000471455 TBC1D20Q96BZ9 403 aa8.56□□□□□ -1.04
CPSF4-211ENST00000471455 PEX11GQ96HA9 241 aa8.56□□□□□ -1.04
CPSF4-211ENST00000471455 CCDC138Q96M89 665 aa8.56□□□□□ -1.04
CPSF4-211ENST00000471455 DMRTA2Q96SC8 542 aa8.56□□□□□ -1.04
CPSF4-211ENST00000471455 TREX2Q9BQ50 279 aaPredicted RBP8.56□□□□□ -1.04
CPSF4-211ENST00000471455 HAUS8Q9BT25 410 aa8.56□□□□□ -1.04
CPSF4-211ENST00000471455 HES7Q9BYE0 225 aa8.56□□□□□ -1.04
CPSF4-211ENST00000471455 CDCP1Q9H5V8 836 aa8.56□□□□□ -1.04
CPSF4-211ENST00000471455 CLK4Q9HAZ1 481 aaKnown RBP8.56□□□□□ -1.04
CPSF4-211ENST00000471455 HOMER3Q9NSC5 361 aa8.56□□□□□ -1.04
CPSF4-211ENST00000471455 NAALAD2Q9Y3Q0 740 aa8.56□□□□□ -1.04
CPSF4-211ENST00000471455 CAPN6Q9Y6Q1 641 aa8.56□□□□□ -1.04
CPSF4-211ENST00000471455 GTF3C1Q12789 2109 aa8.56□□□□□ -1.04
CPSF4-211ENST00000471455 URADA6NGE7 173 aa8.55□□□□□ -1.04
CPSF4-211ENST00000471455 GFYI3L273 518 aa8.55□□□□□ -1.04
CPSF4-211ENST00000471455 PSMD12O00232 456 aaPredicted RBP8.55□□□□□ -1.04
CPSF4-211ENST00000471455 CDC123O75794 336 aaPredicted RBP8.55□□□□□ -1.04
CPSF4-211ENST00000471455 STATHP02808 62 aa8.55□□□□□ -1.04
CPSF4-211ENST00000471455 C8GP07360 202 aa8.55□□□□□ -1.04
CPSF4-211ENST00000471455 HIST1H2AGP0C0S8 130 aaPredicted RBP8.55□□□□□ -1.04
CPSF4-211ENST00000471455 ZSCAN5DPP0CG00 497 aa8.55□□□□□ -1.04
CPSF4-211ENST00000471455 HIST1H2ADP20671 130 aa8.55□□□□□ -1.04
CPSF4-211ENST00000471455 TPP2P29144 1249 aaPredicted RBP8.55□□□□□ -1.04
CPSF4-211ENST00000471455 TRHRP34981 398 aaPredicted RBP8.55□□□□□ -1.04
CPSF4-211ENST00000471455 HLCSP50747 726 aa8.55□□□□□ -1.04
CPSF4-211ENST00000471455 ZNF75DP51815 510 aa8.55□□□□□ -1.04
CPSF4-211ENST00000471455 RHAGQ02094 409 aa8.55□□□□□ -1.04
CPSF4-211ENST00000471455 RGS1Q08116 209 aa8.55□□□□□ -1.04
CPSF4-211ENST00000471455 PWP1Q13610 501 aa8.55□□□□□ -1.04
CPSF4-211ENST00000471455 CUL1Q13616 776 aa8.55□□□□□ -1.04
CPSF4-211ENST00000471455 DHX34Q14147 1143 aaKnown RBP8.55□□□□□ -1.04
CPSF4-211ENST00000471455 CAPN13Q6MZZ7 669 aaPredicted RBP8.55□□□□□ -1.04
CPSF4-211ENST00000471455 ARHGAP11AQ6P4F7 1023 aa8.55□□□□□ -1.04
CPSF4-211ENST00000471455 PAOXQ6QHF9 649 aa8.55□□□□□ -1.04
CPSF4-211ENST00000471455 CES3Q6UWW8 571 aa8.55□□□□□ -1.04
CPSF4-211ENST00000471455 CENPUQ71F23 418 aa8.55□□□□□ -1.04
CPSF4-211ENST00000471455 ABHD13Q7L211 337 aa8.55□□□□□ -1.04
CPSF4-211ENST00000471455 PRSS41Q7RTY9 318 aa8.55□□□□□ -1.04
CPSF4-211ENST00000471455 PRUNE1Q86TP1 453 aa8.55□□□□□ -1.04
CPSF4-211ENST00000471455 CD163Q86VB7 1156 aa8.55□□□□□ -1.04
CPSF4-211ENST00000471455 LRRC56Q8IYG6 542 aaPredicted RBP8.55□□□□□ -1.04
CPSF4-211ENST00000471455 MFSD9Q8NBP5 474 aa8.55□□□□□ -1.04
CPSF4-211ENST00000471455 FAM57AQ8TBR7 257 aa8.55□□□□□ -1.04
CPSF4-211ENST00000471455 ELP5Q8TE02 316 aa8.55□□□□□ -1.04
CPSF4-211ENST00000471455 ZNF669Q96BR6 464 aaPredicted RBP8.55□□□□□ -1.04
CPSF4-211ENST00000471455 TM4SF19Q96DZ7 209 aa8.55□□□□□ -1.04
CPSF4-211ENST00000471455 HIST1H2AHQ96KK5 128 aa8.55□□□□□ -1.04
CPSF4-211ENST00000471455 NPAS2Q99743 824 aa8.55□□□□□ -1.04
CPSF4-211ENST00000471455 HIST1H2AJQ99878 128 aa8.55□□□□□ -1.04
CPSF4-211ENST00000471455 H2AFJQ9BTM1 129 aa8.55□□□□□ -1.04
CPSF4-211ENST00000471455 RBCK1Q9BYM8 510 aa8.55□□□□□ -1.04
CPSF4-211ENST00000471455 TP63Q9H3D4 680 aaPredicted RBP8.55□□□□□ -1.04
CPSF4-211ENST00000471455 TRIM45Q9H8W5 580 aaPredicted RBP8.55□□□□□ -1.04
CPSF4-211ENST00000471455 XAB2Q9HCS7 855 aaKnown RBP8.55□□□□□ -1.04
CPSF4-211ENST00000471455 KCNN3Q9UGI6 736 aa8.55□□□□□ -1.04
CPSF4-211ENST00000471455 TRMT6Q9UJA5 497 aaKnown RBP8.55□□□□□ -1.04
CPSF4-211ENST00000471455 DHRS7Q9Y394 339 aa8.55□□□□□ -1.04
CPSF4-211ENST00000471455 TACC2O95359 2948 aa8.54□□□□□ -1.04
CPSF4-211ENST00000471455 CELSR1Q9NYQ6 3014 aa8.54□□□□□ -1.04
CPSF4-211ENST00000471455 CSMD2Q7Z408 3487 aa8.54□□□□□ -1.04
CPSF4-211ENST00000471455 FAM237BA0A1B0GVD1 139 aa8.54□□□□□ -1.04
CPSF4-211ENST00000471455 SYNDIG1LA6NDD5 238 aa8.54□□□□□ -1.04
CPSF4-211ENST00000471455 SAGE2PA6NJ88 616 aa8.54□□□□□ -1.04
CPSF4-211ENST00000471455 ACOT7O00154 380 aa8.54□□□□□ -1.04
CPSF4-211ENST00000471455 SLC16A5O15375 505 aa8.54□□□□□ -1.04
CPSF4-211ENST00000471455 NDUFS4O43181 175 aa8.54□□□□□ -1.04
CPSF4-211ENST00000471455 PROCP04070 461 aa8.54□□□□□ -1.04
CPSF4-211ENST00000471455 MLNP12872 115 aa8.54□□□□□ -1.04
CPSF4-211ENST00000471455 ALOX12P18054 663 aa8.54□□□□□ -1.04
CPSF4-211ENST00000471455 MEOX1P50221 254 aa8.54□□□□□ -1.04
CPSF4-211ENST00000471455 CCR8P51685 355 aa8.54□□□□□ -1.04
CPSF4-211ENST00000471455 ITGA8P53708 1063 aa8.54□□□□□ -1.04
CPSF4-211ENST00000471455 MLF1P58340 268 aa8.54□□□□□ -1.04
CPSF4-211ENST00000471455 KRTAP10-9P60411 292 aa8.54□□□□□ -1.04
CPSF4-211ENST00000471455 HSF1Q00613 529 aa8.54□□□□□ -1.04
CPSF4-211ENST00000471455 CDSNQ15517 529 aa8.54□□□□□ -1.04
CPSF4-211ENST00000471455 CES4AQ5XG92 561 aa8.54□□□□□ -1.04
CPSF4-211ENST00000471455 LCTLQ6UWM7 567 aa8.54□□□□□ -1.04
CPSF4-211ENST00000471455 C3P1Q6ZMU1 363 aa8.54□□□□□ -1.04
CPSF4-211ENST00000471455 QSOX2Q6ZRP7 698 aa8.54□□□□□ -1.04
CPSF4-211ENST00000471455 ACAD11Q709F0 780 aa8.54□□□□□ -1.04
CPSF4-211ENST00000471455 PIWIL4Q7Z3Z4 852 aaKnown RBP8.54□□□□□ -1.04
CPSF4-211ENST00000471455 TMEM200AQ86VY9 491 aa8.54□□□□□ -1.04
CPSF4-211ENST00000471455 SLC26A11Q86WA9 606 aa8.54□□□□□ -1.04
CPSF4-211ENST00000471455 CPNE9Q8IYJ1 553 aa8.54□□□□□ -1.04
CPSF4-211ENST00000471455 MYO1HQ8N1T3 1032 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms