RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 SEMA3DO95025 777 aa16.71■□□□□ 0.27
HSPG2-208ENST00000471322 C8BP07358 591 aa16.71■□□□□ 0.27
HSPG2-208ENST00000471322 HPCAL1P37235 193 aa16.71■□□□□ 0.27
HSPG2-208ENST00000471322 RPL3P39023 403 aaKnown RBP16.71■□□□□ 0.27
HSPG2-208ENST00000471322 CLDN6P56747 220 aa16.71■□□□□ 0.27
HSPG2-208ENST00000471322 RHDQ02161 417 aa16.71■□□□□ 0.27
HSPG2-208ENST00000471322 LIPEQ05469 1076 aa16.71■□□□□ 0.27
HSPG2-208ENST00000471322 LRRC74AQ0VAA2 488 aa16.71■□□□□ 0.27
HSPG2-208ENST00000471322 PGS1Q32NB8 556 aa16.71■□□□□ 0.27
HSPG2-208ENST00000471322 C6orf132Q5T0Z8 1188 aa16.71■□□□□ 0.27
HSPG2-208ENST00000471322 ZCCHC8Q6NZY4 707 aaKnown RBP16.71■□□□□ 0.27
HSPG2-208ENST00000471322 PTRH1Q86Y79 214 aaKnown RBP16.71■□□□□ 0.27
HSPG2-208ENST00000471322 AQP12AQ8IXF9 295 aa16.71■□□□□ 0.27
HSPG2-208ENST00000471322 SLC35F3Q8IY50 421 aa16.71■□□□□ 0.27
HSPG2-208ENST00000471322 METTL4Q8N3J2 472 aa16.71■□□□□ 0.27
HSPG2-208ENST00000471322 TBC1D19Q8N5T2 526 aa16.71■□□□□ 0.27
HSPG2-208ENST00000471322 OR8J2Q8NGG1 315 aa16.71■□□□□ 0.27
HSPG2-208ENST00000471322 GPBAR1Q8TDU6 330 aa16.71■□□□□ 0.27
HSPG2-208ENST00000471322 DUS3LQ96G46 650 aaKnown RBP16.71■□□□□ 0.27
HSPG2-208ENST00000471322 EBPLQ9BY08 206 aa16.71■□□□□ 0.27
HSPG2-208ENST00000471322 VCX3BQ9H321 246 aa16.71■□□□□ 0.27
HSPG2-208ENST00000471322 SCHIP1Q9P0W5 487 aaPredicted RBP16.71■□□□□ 0.27
HSPG2-208ENST00000471322 ACTR3BQ9P1U1 418 aa16.71■□□□□ 0.27
HSPG2-208ENST00000471322 ICKQ9UPZ9 632 aa16.71■□□□□ 0.27
HSPG2-208ENST00000471322 U3KQA8 63 aa16.71■□□□□ 0.27
HSPG2-208ENST00000471322 ARHGEF17Q96PE2 2063 aaPredicted RBP16.71■□□□□ 0.26
HSPG2-208ENST00000471322 GNG14A0A1W2PPG7 69 aa16.7■□□□□ 0.26
HSPG2-208ENST00000471322 CPED1A4D0V7 1026 aa16.7■□□□□ 0.26
HSPG2-208ENST00000471322 H3BNX3 289 aa16.7■□□□□ 0.26
HSPG2-208ENST00000471322 H7BY64 318 aa16.7■□□□□ 0.26
HSPG2-208ENST00000471322 CASC3O15234 703 aaKnown RBP16.7■□□□□ 0.26
HSPG2-208ENST00000471322 PCDH7O60245 1069 aa16.7■□□□□ 0.26
HSPG2-208ENST00000471322 TGFB1P01137 390 aa16.7■□□□□ 0.26
HSPG2-208ENST00000471322 CKMT2P17540 419 aa16.7■□□□□ 0.26
HSPG2-208ENST00000471322 SPINK2P20155 84 aa16.7■□□□□ 0.26
HSPG2-208ENST00000471322 GSTM2P28161 218 aa16.7■□□□□ 0.26
HSPG2-208ENST00000471322 HTR1EP28566 365 aa16.7■□□□□ 0.26
HSPG2-208ENST00000471322 TRPC1P48995 793 aa16.7■□□□□ 0.26
HSPG2-208ENST00000471322 GSK3BP49841 420 aa16.7■□□□□ 0.26
HSPG2-208ENST00000471322 RAE1P78406 368 aaKnown RBP16.7■□□□□ 0.26
HSPG2-208ENST00000471322 MEF2AQ02078 507 aaPredicted RBP16.7■□□□□ 0.26
HSPG2-208ENST00000471322 FOXC1Q12948 553 aa16.7■□□□□ 0.26
HSPG2-208ENST00000471322 RABL3Q5HYI8 236 aa16.7■□□□□ 0.26
HSPG2-208ENST00000471322 WLSQ5T9L3 541 aa16.7■□□□□ 0.26
HSPG2-208ENST00000471322 ADNP2Q6IQ32 1131 aa16.7■□□□□ 0.26
HSPG2-208ENST00000471322 GUSBP11Q6P575 273 aa16.7■□□□□ 0.26
HSPG2-208ENST00000471322 GLRX5Q86SX6 157 aa16.7■□□□□ 0.26
HSPG2-208ENST00000471322 ZNF740Q8NDX6 193 aa16.7■□□□□ 0.26
HSPG2-208ENST00000471322 VPS37AQ8NEZ2 397 aa16.7■□□□□ 0.26
HSPG2-208ENST00000471322 TNIP2Q8NFZ5 429 aa16.7■□□□□ 0.26
HSPG2-208ENST00000471322 OR2A1Q8NGT9 310 aa16.7■□□□□ 0.26
HSPG2-208ENST00000471322 PATE1Q8WXA2 126 aa16.7■□□□□ 0.26
HSPG2-208ENST00000471322 EGLN2Q96KS0 407 aa16.7■□□□□ 0.26
HSPG2-208ENST00000471322 PPM1MQ96MI6 270 aa16.7■□□□□ 0.26
HSPG2-208ENST00000471322 PRAP1Q96NZ9 151 aa16.7■□□□□ 0.26
HSPG2-208ENST00000471322 GSDMCQ9BYG8 508 aa16.7■□□□□ 0.26
HSPG2-208ENST00000471322 SPNS1Q9H2V7 528 aa16.7■□□□□ 0.26
HSPG2-208ENST00000471322 XKR8Q9H6D3 395 aa16.7■□□□□ 0.26
HSPG2-208ENST00000471322 FAM120CQ9NX05 1096 aaKnown RBP16.7■□□□□ 0.26
HSPG2-208ENST00000471322 TAAR2Q9P1P5 351 aa16.7■□□□□ 0.26
HSPG2-208ENST00000471322 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.7■□□□□ 0.26
HSPG2-208ENST00000471322 C15orf41Q9Y2V0 281 aa16.7■□□□□ 0.26
HSPG2-208ENST00000471322 WBP11Q9Y2W2 641 aaKnown RBP16.7■□□□□ 0.26
HSPG2-208ENST00000471322 TRBV23OR9-2A0A075B6M9 112 aa16.7■□□□□ 0.26
HSPG2-208ENST00000471322 TCRBV3S1A0A5B6 114 aa16.7■□□□□ 0.26
HSPG2-208ENST00000471322 LRATO95237 230 aa16.7■□□□□ 0.26
HSPG2-208ENST00000471322 F3P13726 295 aa16.7■□□□□ 0.26
HSPG2-208ENST00000471322 COX7A2P14406 83 aa16.7■□□□□ 0.26
HSPG2-208ENST00000471322 GRK3P35626 688 aa16.7■□□□□ 0.26
HSPG2-208ENST00000471322 MRPS22P82650 360 aaKnown RBP16.7■□□□□ 0.26
HSPG2-208ENST00000471322 LRIF1Q5T3J3 769 aa16.7■□□□□ 0.26
HSPG2-208ENST00000471322 IRAK1BP1Q5VVH5 260 aa16.7■□□□□ 0.26
HSPG2-208ENST00000471322 LCN8Q6JVE9 175 aa16.7■□□□□ 0.26
HSPG2-208ENST00000471322 DHRS13Q6UX07 377 aa16.7■□□□□ 0.26
HSPG2-208ENST00000471322 COMMD6Q7Z4G1 85 aa16.7■□□□□ 0.26
HSPG2-208ENST00000471322 CAMKMTQ7Z624 323 aa16.7■□□□□ 0.26
HSPG2-208ENST00000471322 AMIGO1Q86WK6 493 aa16.7■□□□□ 0.26
HSPG2-208ENST00000471322 PROSER1Q86XN7 944 aa16.7■□□□□ 0.26
HSPG2-208ENST00000471322 TMEM126BQ8IUX1 230 aa16.7■□□□□ 0.26
HSPG2-208ENST00000471322 TMEM132CQ8N3T6 1108 aa16.7■□□□□ 0.26
HSPG2-208ENST00000471322 GPR156Q8NFN8 814 aa16.7■□□□□ 0.26
HSPG2-208ENST00000471322 NUDT8Q8WV74 236 aa16.7■□□□□ 0.26
HSPG2-208ENST00000471322 LCN9Q8WX39 176 aa16.7■□□□□ 0.26
HSPG2-208ENST00000471322 SLC22A18Q96BI1 424 aa16.7■□□□□ 0.26
HSPG2-208ENST00000471322 QRFPRQ96P65 431 aa16.7■□□□□ 0.26
HSPG2-208ENST00000471322 ECSITQ9BQ95 431 aa16.7■□□□□ 0.26
HSPG2-208ENST00000471322 CENPKQ9BS16 269 aa16.7■□□□□ 0.26
HSPG2-208ENST00000471322 TACO1Q9BSH4 297 aaKnown RBP16.7■□□□□ 0.26
HSPG2-208ENST00000471322 EFHD1Q9BUP0 239 aa16.7■□□□□ 0.26
HSPG2-208ENST00000471322 OR51B5Q9H339 312 aa16.7■□□□□ 0.26
HSPG2-208ENST00000471322 MRPS30Q9NP92 439 aaKnown RBP16.7■□□□□ 0.26
HSPG2-208ENST00000471322 TMEM184CQ9NVA4 438 aa16.7■□□□□ 0.26
HSPG2-208ENST00000471322 CUEDC1Q9NWM3 386 aaPredicted RBP16.7■□□□□ 0.26
HSPG2-208ENST00000471322 MCM8Q9UJA3 840 aa16.7■□□□□ 0.26
HSPG2-208ENST00000471322 LRRC42Q9Y546 428 aa16.7■□□□□ 0.26
HSPG2-208ENST00000471322 SNX13Q9Y5W8 968 aa16.7■□□□□ 0.26
HSPG2-208ENST00000471322 ASXL3Q9C0F0 2248 aa16.69■□□□□ 0.26
HSPG2-208ENST00000471322 A6NCN8 305 aa16.69■□□□□ 0.26
HSPG2-208ENST00000471322 OR5K4A6NMS3 321 aa16.69■□□□□ 0.26
HSPG2-208ENST00000471322 SCAMP2O15127 329 aaKnown RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms