RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 DDX39BQ13838 428 aaKnown RBP18.69■□□□□ 0.58
HDAC7-220ENST00000471235 SSPNQ14714 243 aa18.69■□□□□ 0.58
HDAC7-220ENST00000471235 CPSF6Q16630 551 aaKnown RBP eCLIP18.69■□□□□ 0.58
HDAC7-220ENST00000471235 LINC00303Q3SY05 128 aa18.69■□□□□ 0.58
HDAC7-220ENST00000471235 CEP85LQ5SZL2 805 aa18.69■□□□□ 0.58
HDAC7-220ENST00000471235 NIPAL1Q6NVV3 410 aa18.69■□□□□ 0.58
HDAC7-220ENST00000471235 PCSK4Q6UW60 755 aa18.69■□□□□ 0.58
HDAC7-220ENST00000471235 RNF175Q8N4F7 328 aa18.69■□□□□ 0.58
HDAC7-220ENST00000471235 CCDC63Q8NA47 563 aa18.69■□□□□ 0.58
HDAC7-220ENST00000471235 UBL7Q96S82 380 aaPredicted RBP18.69■□□□□ 0.58
HDAC7-220ENST00000471235 CRB3Q9BUF7 120 aa18.69■□□□□ 0.58
HDAC7-220ENST00000471235 TGIF2Q9GZN2 237 aa18.69■□□□□ 0.58
HDAC7-220ENST00000471235 IQCGQ9H095 443 aaKnown RBP18.69■□□□□ 0.58
HDAC7-220ENST00000471235 TSC22D4Q9Y3Q8 395 aa18.69■□□□□ 0.58
HDAC7-220ENST00000471235 PCDHGA11Q9Y5H2 935 aa18.69■□□□□ 0.58
HDAC7-220ENST00000471235 IGSF10Q6WRI0 2623 aa18.68■□□□□ 0.58
HDAC7-220ENST00000471235 A0A0G2JN53 185 aa18.68■□□□□ 0.58
HDAC7-220ENST00000471235 PPP6CO00743 305 aa18.68■□□□□ 0.58
HDAC7-220ENST00000471235 RGS16O15492 202 aaPredicted RBP18.68■□□□□ 0.58
HDAC7-220ENST00000471235 CTIFO43310 598 aaKnown RBP18.68■□□□□ 0.58
HDAC7-220ENST00000471235 SPAG7O75391 227 aa18.68■□□□□ 0.58
HDAC7-220ENST00000471235 JRKO75564 520 aa18.68■□□□□ 0.58
HDAC7-220ENST00000471235 OTCP00480 354 aa18.68■□□□□ 0.58
HDAC7-220ENST00000471235 CREB1P16220 341 aa18.68■□□□□ 0.58
HDAC7-220ENST00000471235 XCR1P46094 333 aa18.68■□□□□ 0.58
HDAC7-220ENST00000471235 CLCQ05315 142 aa18.68■□□□□ 0.58
HDAC7-220ENST00000471235 ZRSR2Q15696 482 aaKnown RBP18.68■□□□□ 0.58
HDAC7-220ENST00000471235 GGTA1PQ4G0N0 100 aa18.68■□□□□ 0.58
HDAC7-220ENST00000471235 CPZQ66K79 652 aa18.68■□□□□ 0.58
HDAC7-220ENST00000471235 LETMD1Q6P1Q0 360 aa18.68■□□□□ 0.58
HDAC7-220ENST00000471235 LRIG3Q6UXM1 1119 aa18.68■□□□□ 0.58
HDAC7-220ENST00000471235 LAPTM4BQ86VI4 370 aa18.68■□□□□ 0.58
HDAC7-220ENST00000471235 OR2L5Q8NG80 312 aa18.68■□□□□ 0.58
HDAC7-220ENST00000471235 OR4F6Q8NGB9 312 aa18.68■□□□□ 0.58
HDAC7-220ENST00000471235 OR51Q1Q8NH59 317 aa18.68■□□□□ 0.58
HDAC7-220ENST00000471235 HUS1BQ8NHY5 278 aa18.68■□□□□ 0.58
HDAC7-220ENST00000471235 WDR20Q8TBZ3 569 aa18.68■□□□□ 0.58
HDAC7-220ENST00000471235 TRPC4APQ8TEL6 797 aa18.68■□□□□ 0.58
HDAC7-220ENST00000471235 PPP4R1Q8TF05 950 aa18.68■□□□□ 0.58
HDAC7-220ENST00000471235 ZBTB9Q96C00 473 aa18.68■□□□□ 0.58
HDAC7-220ENST00000471235 CCDC126Q96EE4 140 aa18.68■□□□□ 0.58
HDAC7-220ENST00000471235 QRFPRQ96P65 431 aa18.68■□□□□ 0.58
HDAC7-220ENST00000471235 F2RL3Q96RI0 385 aa18.68■□□□□ 0.58
HDAC7-220ENST00000471235 SMC6Q96SB8 1091 aa18.68■□□□□ 0.58
HDAC7-220ENST00000471235 REXO4Q9GZR2 422 aaKnown RBP18.68■□□□□ 0.58
HDAC7-220ENST00000471235 DMRT3Q9NQL9 472 aa18.68■□□□□ 0.58
HDAC7-220ENST00000471235 SEMA3GQ9NS98 782 aa18.68■□□□□ 0.58
HDAC7-220ENST00000471235 MID2Q9UJV3 735 aa18.68■□□□□ 0.58
HDAC7-220ENST00000471235 PLLPQ9Y342 182 aa18.68■□□□□ 0.58
HDAC7-220ENST00000471235 KCNMB2Q9Y691 235 aa18.68■□□□□ 0.58
HDAC7-220ENST00000471235 DNAJB6O75190 326 aa18.67■□□□□ 0.58
HDAC7-220ENST00000471235 BMP10O95393 424 aa18.67■□□□□ 0.58
HDAC7-220ENST00000471235 CPA3P15088 417 aa18.67■□□□□ 0.58
HDAC7-220ENST00000471235 MMP11P24347 488 aa18.67■□□□□ 0.58
HDAC7-220ENST00000471235 HPDP32754 393 aaPredicted RBP18.67■□□□□ 0.58
HDAC7-220ENST00000471235 EFNA3P52797 238 aa18.67■□□□□ 0.58
HDAC7-220ENST00000471235 PCLAFQ15004 111 aa18.67■□□□□ 0.58
HDAC7-220ENST00000471235 FAM219BQ5XKK7 198 aa18.67■□□□□ 0.58
HDAC7-220ENST00000471235 TRIM40Q6P9F5 258 aa18.67■□□□□ 0.58
HDAC7-220ENST00000471235 ARMC2Q8NEN0 867 aa18.67■□□□□ 0.58
HDAC7-220ENST00000471235 REPS1Q96D71 796 aa18.67■□□□□ 0.58
HDAC7-220ENST00000471235 RBCK1Q9BYM8 510 aa18.67■□□□□ 0.58
HDAC7-220ENST00000471235 GSTO2Q9H4Y5 243 aa18.67■□□□□ 0.58
HDAC7-220ENST00000471235 PRM3Q9NNZ6 103 aa18.67■□□□□ 0.58
HDAC7-220ENST00000471235 SENP1Q9P0U3 644 aa18.67■□□□□ 0.58
HDAC7-220ENST00000471235 SLC17A7Q9P2U7 560 aa18.67■□□□□ 0.58
HDAC7-220ENST00000471235 ADGRE2Q9UHX3 823 aa18.67■□□□□ 0.58
HDAC7-220ENST00000471235 C3orf18Q9UK00 162 aa18.67■□□□□ 0.58
HDAC7-220ENST00000471235 ZNF225Q9UK10 706 aa18.67■□□□□ 0.58
HDAC7-220ENST00000471235 RALYQ9UKM9 306 aaKnown RBP18.67■□□□□ 0.58
HDAC7-220ENST00000471235 HS3ST3B1Q9Y662 390 aa18.67■□□□□ 0.58
HDAC7-220ENST00000471235 ARGFXA6NJG6 315 aa18.66■□□□□ 0.58
HDAC7-220ENST00000471235 IDSB3KWA1 339 aa18.66■□□□□ 0.58
HDAC7-220ENST00000471235 SOCS6O14544 535 aa18.66■□□□□ 0.58
HDAC7-220ENST00000471235 CHST10O43529 356 aa18.66■□□□□ 0.58
HDAC7-220ENST00000471235 SH3BGRLO75368 114 aa18.66■□□□□ 0.58
HDAC7-220ENST00000471235 TGFB1P01137 390 aa18.66■□□□□ 0.58
HDAC7-220ENST00000471235 IGHEP01854 428 aa18.66■□□□□ 0.58
HDAC7-220ENST00000471235 PIK3CBP42338 1070 aa18.66■□□□□ 0.58
HDAC7-220ENST00000471235 CCR10P46092 362 aa18.66■□□□□ 0.58
HDAC7-220ENST00000471235 PLA2G16P53816 162 aa18.66■□□□□ 0.58
HDAC7-220ENST00000471235 BTN3A2P78410 334 aa18.66■□□□□ 0.58
HDAC7-220ENST00000471235 PHEXP78562 749 aa18.66■□□□□ 0.58
HDAC7-220ENST00000471235 CHAF1BQ13112 559 aa18.66■□□□□ 0.58
HDAC7-220ENST00000471235 ABHD17CQ6PCB6 329 aa18.66■□□□□ 0.58
HDAC7-220ENST00000471235 UBE3DQ7Z6J8 389 aa18.66■□□□□ 0.58
HDAC7-220ENST00000471235 MILR1Q7Z6M3 343 aa18.66■□□□□ 0.58
HDAC7-220ENST00000471235 CA13Q8N1Q1 262 aa18.66■□□□□ 0.58
HDAC7-220ENST00000471235 TCP10LQ8TDR4 215 aa18.66■□□□□ 0.58
HDAC7-220ENST00000471235 APOBEC4Q8WW27 367 aaKnown RBP18.66■□□□□ 0.58
HDAC7-220ENST00000471235 CMTM7Q96FZ5 175 aa18.66■□□□□ 0.58
HDAC7-220ENST00000471235 PEX11GQ96HA9 241 aa18.66■□□□□ 0.58
HDAC7-220ENST00000471235 FAR2Q96K12 515 aa18.66■□□□□ 0.58
HDAC7-220ENST00000471235 IP6K3Q96PC2 410 aa18.66■□□□□ 0.58
HDAC7-220ENST00000471235 FAM111AQ96PZ2 611 aa18.66■□□□□ 0.58
HDAC7-220ENST00000471235 ZNF382Q96SR6 550 aa18.66■□□□□ 0.58
HDAC7-220ENST00000471235 MTERF1Q99551 399 aaKnown RBP18.66■□□□□ 0.58
HDAC7-220ENST00000471235 MESP1Q9BRJ9 268 aa18.66■□□□□ 0.58
HDAC7-220ENST00000471235 P4HTMQ9NXG6 502 aa18.66■□□□□ 0.58
HDAC7-220ENST00000471235 TRPS1Q9UHF7 1281 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms