RNA–Protein interactions for RNA: ENST00000470621.1

SSB-209, Transcript of Sjogren syndrome antigen B, human

TSL 3

Gene SSB, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SSB-209	ENST00000470621	UBQLN3	Q9H347	655 aa		4.39	□□□□□ -1.71
SSB-209	ENST00000470621	FNDC4	Q9H6D8	234 aa	Predicted RBP	4.39	□□□□□ -1.71
SSB-209	ENST00000470621	RPF1	Q9H9Y2	349 aa	Known RBP	4.39	□□□□□ -1.71
SSB-209	ENST00000470621	GPN1	Q9HCN4	374 aa	Predicted RBP	4.39	□□□□□ -1.71
SSB-209	ENST00000470621	KLK11	Q9UBX7	282 aa		4.39	□□□□□ -1.71
SSB-209	ENST00000470621	MRPS18C	Q9Y3D5	142 aa	Known RBP	4.39	□□□□□ -1.71
SSB-209	ENST00000470621	ZHX2	Q9Y6X8	837 aa		4.39	□□□□□ -1.71
SSB-209	ENST00000470621	FER1L5	A0AVI2	2057 aa		4.38	□□□□□ -1.71
SSB-209	ENST00000470621	ACOD1	A6NK06	481 aa		4.38	□□□□□ -1.71
SSB-209	ENST00000470621		A8MU76	341 aa		4.38	□□□□□ -1.71
SSB-209	ENST00000470621	ZNF749	O43361	778 aa		4.38	□□□□□ -1.71
SSB-209	ENST00000470621	GIF	P27352	417 aa		4.38	□□□□□ -1.71
SSB-209	ENST00000470621	SRD5A2	P31213	254 aa		4.38	□□□□□ -1.71
SSB-209	ENST00000470621	ATP4B	P51164	291 aa		4.38	□□□□□ -1.71
SSB-209	ENST00000470621	GRB14	Q14449	540 aa		4.38	□□□□□ -1.71
SSB-209	ENST00000470621	PSMD6	Q15008	389 aa		4.38	□□□□□ -1.71
SSB-209	ENST00000470621	P2RY8	Q86VZ1	359 aa		4.38	□□□□□ -1.71
SSB-209	ENST00000470621	POM121L12	Q8N7R1	296 aa		4.38	□□□□□ -1.71
SSB-209	ENST00000470621	UXS1	Q8NBZ7	420 aa		4.38	□□□□□ -1.71
SSB-209	ENST00000470621	OR5M9	Q8NGP3	310 aa		4.38	□□□□□ -1.71
SSB-209	ENST00000470621	ZDHHC19	Q8WVZ1	309 aa	Predicted RBP	4.38	□□□□□ -1.71
SSB-209	ENST00000470621	DNASE1L2	Q92874	299 aa		4.38	□□□□□ -1.71
SSB-209	ENST00000470621	SGF29	Q96ES7	293 aa		4.38	□□□□□ -1.71
SSB-209	ENST00000470621	CCDC28B	Q9BUN5	200 aa		4.38	□□□□□ -1.71
SSB-209	ENST00000470621	PAPOLG	Q9BWT3	736 aa	Known RBP	4.38	□□□□□ -1.71
SSB-209	ENST00000470621	TUBB1	Q9H4B7	451 aa		4.38	□□□□□ -1.71
SSB-209	ENST00000470621	GMEB2	Q9UKD1	530 aa		4.38	□□□□□ -1.71
SSB-209	ENST00000470621	PCDHGA1	Q9Y5H4	931 aa		4.38	□□□□□ -1.71
SSB-209	ENST00000470621	IGLV4-3	A0A075B6K6	122 aa		4.37	□□□□□ -1.71
SSB-209	ENST00000470621	SHISA9	B4DS77	424 aa		4.37	□□□□□ -1.71
SSB-209	ENST00000470621	ZNF732	B4DXR9	585 aa		4.37	□□□□□ -1.71
SSB-209	ENST00000470621	LMO7DN	F2Z398	122 aa		4.37	□□□□□ -1.71
SSB-209	ENST00000470621	RLN1	P04808	185 aa		4.37	□□□□□ -1.71
SSB-209	ENST00000470621	FKBP3	Q00688	224 aa	Known RBP	4.37	□□□□□ -1.71
SSB-209	ENST00000470621	UPP1	Q16831	310 aa		4.37	□□□□□ -1.71
SSB-209	ENST00000470621	ZRANB3	Q5FWF4	1079 aa		4.37	□□□□□ -1.71
SSB-209	ENST00000470621	ZNF774	Q6NX45	483 aa		4.37	□□□□□ -1.71
SSB-209	ENST00000470621	PET117	Q6UWS5	81 aa		4.37	□□□□□ -1.71
SSB-209	ENST00000470621	C17orf107	Q6ZR85	190 aa		4.37	□□□□□ -1.71
SSB-209	ENST00000470621		Q6ZVQ6	151 aa		4.37	□□□□□ -1.71
SSB-209	ENST00000470621	CCDC185	Q8N715	623 aa		4.37	□□□□□ -1.71
SSB-209	ENST00000470621	SMYD1	Q8NB12	490 aa		4.37	□□□□□ -1.71
SSB-209	ENST00000470621	OR2L2	Q8NH16	312 aa		4.37	□□□□□ -1.71
SSB-209	ENST00000470621	NPRL2	Q8WTW4	380 aa		4.37	□□□□□ -1.71
SSB-209	ENST00000470621	PCDHB18P	Q96TA0	734 aa		4.37	□□□□□ -1.71
SSB-209	ENST00000470621	MRGBP	Q9NV56	204 aa		4.37	□□□□□ -1.71
SSB-209	ENST00000470621	STYXL1	Q9Y6J8	313 aa		4.37	□□□□□ -1.71
SSB-209	ENST00000470621	HCFC1	P51610	2035 aa		4.37	□□□□□ -1.71
SSB-209	ENST00000470621		A0A0B4J203	849 aa		4.36	□□□□□ -1.71
SSB-209	ENST00000470621	NKX6-3	A6NJ46	265 aa		4.36	□□□□□ -1.71
SSB-209	ENST00000470621	ANHX	E9PGG2	379 aa		4.36	□□□□□ -1.71
SSB-209	ENST00000470621	RNF103	O00237	685 aa		4.36	□□□□□ -1.71
SSB-209	ENST00000470621	TBCA	O75347	108 aa	Known RBP	4.36	□□□□□ -1.71
SSB-209	ENST00000470621	HOXD4	P09016	255 aa	Predicted RBP	4.36	□□□□□ -1.71
SSB-209	ENST00000470621	CTNNA2	P26232	953 aa		4.36	□□□□□ -1.71
SSB-209	ENST00000470621	PIK3R1	P27986	724 aa		4.36	□□□□□ -1.71
SSB-209	ENST00000470621	FEN1	P39748	380 aa	Known RBP	4.36	□□□□□ -1.71
SSB-209	ENST00000470621	OR3A3	P47888	321 aa		4.36	□□□□□ -1.71
SSB-209	ENST00000470621	NDUFV3	P56181	108 aa	Known RBP	4.36	□□□□□ -1.71
SSB-209	ENST00000470621	EVC	P57679	992 aa		4.36	□□□□□ -1.71
SSB-209	ENST00000470621	ABCE1	P61221	599 aa	Known RBP	4.36	□□□□□ -1.71
SSB-209	ENST00000470621	MLF2	Q15773	248 aa	Predicted RBP	4.36	□□□□□ -1.71
SSB-209	ENST00000470621	DDX59	Q5T1V6	619 aa	Known RBP eCLIP	4.36	□□□□□ -1.71
SSB-209	ENST00000470621	ZNF841	Q6ZN19	808 aa		4.36	□□□□□ -1.71
SSB-209	ENST00000470621	MACC1	Q6ZN28	852 aa		4.36	□□□□□ -1.71
SSB-209	ENST00000470621	CDHR3	Q6ZTQ4	885 aa		4.36	□□□□□ -1.71
SSB-209	ENST00000470621	C15orf52	Q6ZUT6	534 aa	Known RBP	4.36	□□□□□ -1.71
SSB-209	ENST00000470621		Q71RC1	249 aa	Predicted RBP	4.36	□□□□□ -1.71
SSB-209	ENST00000470621	TIPARP	Q7Z3E1	657 aa	Known RBP	4.36	□□□□□ -1.71
SSB-209	ENST00000470621	KCNMB4	Q86W47	210 aa		4.36	□□□□□ -1.71
SSB-209	ENST00000470621	CDC20B	Q86Y33	519 aa		4.36	□□□□□ -1.71
SSB-209	ENST00000470621	SPPL2A	Q8TCT8	520 aa		4.36	□□□□□ -1.71
SSB-209	ENST00000470621	DEPDC1B	Q8WUY9	529 aa		4.36	□□□□□ -1.71
SSB-209	ENST00000470621	C11orf52	Q96A22	123 aa		4.36	□□□□□ -1.71
SSB-209	ENST00000470621	ERO1A	Q96HE7	468 aa		4.36	□□□□□ -1.71
SSB-209	ENST00000470621	PRMT1	Q99873	361 aa	Known RBP	4.36	□□□□□ -1.71
SSB-209	ENST00000470621	CHCHD5	Q9BSY4	110 aa		4.36	□□□□□ -1.71
SSB-209	ENST00000470621	THUMPD3	Q9BV44	507 aa	Known RBP	4.36	□□□□□ -1.71
SSB-209	ENST00000470621	DBF4	Q9UBU7	674 aa	Predicted RBP	4.36	□□□□□ -1.71
SSB-209	ENST00000470621	RNF123	Q5XPI4	1314 aa		4.36	□□□□□ -1.71
SSB-209	ENST00000470621	KIAA1217	Q5T5P2	1943 aa		4.35	□□□□□ -1.71
SSB-209	ENST00000470621	ANKDD1B	A6NHY2	528 aa		4.35	□□□□□ -1.71
SSB-209	ENST00000470621	YDJC	A8MPS7	323 aa		4.35	□□□□□ -1.71
SSB-209	ENST00000470621	CTDSPL	O15194	276 aa		4.35	□□□□□ -1.71
SSB-209	ENST00000470621	CENPB	P07199	599 aa	Predicted RBP	4.35	□□□□□ -1.71
SSB-209	ENST00000470621	PC	P11498	1178 aa	Known RBP	4.35	□□□□□ -1.71
SSB-209	ENST00000470621	SCG2	P13521	617 aa		4.35	□□□□□ -1.71
SSB-209	ENST00000470621	IL4R	P24394	825 aa		4.35	□□□□□ -1.71
SSB-209	ENST00000470621	PGF	P49763	221 aa		4.35	□□□□□ -1.71
SSB-209	ENST00000470621	ZFP36L1	Q07352	338 aa	Known RBP	4.35	□□□□□ -1.71
SSB-209	ENST00000470621	MAPK11	Q15759	364 aa		4.35	□□□□□ -1.71
SSB-209	ENST00000470621	ARMC3	Q5W041	872 aa		4.35	□□□□□ -1.71
SSB-209	ENST00000470621	SIX6OS1	Q8N1H7	587 aa		4.35	□□□□□ -1.71
SSB-209	ENST00000470621	KIAA0895	Q8NCT3	520 aa		4.35	□□□□□ -1.71
SSB-209	ENST00000470621	SLC39A8	Q9C0K1	460 aa		4.35	□□□□□ -1.71
SSB-209	ENST00000470621	HEXA-AS1	Q9H8Q6	139 aa		4.35	□□□□□ -1.71
SSB-209	ENST00000470621	DNAJB9	Q9UBS3	223 aa		4.35	□□□□□ -1.71
SSB-209	ENST00000470621	ITGA11	Q9UKX5	1188 aa		4.35	□□□□□ -1.71
SSB-209	ENST00000470621	ARHGEF33	A8MVX0	844 aa		4.34	□□□□□ -1.71
SSB-209	ENST00000470621	TRAFD1	O14545	582 aa	Predicted RBP	4.34	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms