RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 TAS2R39P59534 338 aa12.44□□□□□ -0.42
CPSF4-210ENST00000469897 SKP1P63208 163 aa12.44□□□□□ -0.42
CPSF4-210ENST00000469897 REEP5Q00765 189 aa12.44□□□□□ -0.42
CPSF4-210ENST00000469897 MGAT5Q09328 741 aa12.44□□□□□ -0.42
CPSF4-210ENST00000469897 PDIA2Q13087 525 aaKnown RBP12.44□□□□□ -0.42
CPSF4-210ENST00000469897 TSNQ15631 228 aaKnown RBP12.44□□□□□ -0.42
CPSF4-210ENST00000469897 ZNF630Q2M218 657 aaPredicted RBP12.44□□□□□ -0.42
CPSF4-210ENST00000469897 TOR1AIP1Q5JTV8 583 aa12.44□□□□□ -0.42
CPSF4-210ENST00000469897 STEAP4Q687X5 459 aa12.44□□□□□ -0.42
CPSF4-210ENST00000469897 ZC3HC1Q86WB0 502 aaKnown RBP12.44□□□□□ -0.42
CPSF4-210ENST00000469897 CREG2Q8IUH2 290 aa12.44□□□□□ -0.42
CPSF4-210ENST00000469897 CEP97Q8IW35 865 aa12.44□□□□□ -0.42
CPSF4-210ENST00000469897 CA13Q8N1Q1 262 aa12.44□□□□□ -0.42
CPSF4-210ENST00000469897 SPATA6LQ8N4H0 392 aa12.44□□□□□ -0.42
CPSF4-210ENST00000469897 FBXO36Q8NEA4 188 aa12.44□□□□□ -0.42
CPSF4-210ENST00000469897 NFAM1Q8NET5 270 aaPredicted RBP12.44□□□□□ -0.42
CPSF4-210ENST00000469897 CREB3L4Q8TEY5 395 aa12.44□□□□□ -0.42
CPSF4-210ENST00000469897 FRMD6Q96NE9 622 aa12.44□□□□□ -0.42
CPSF4-210ENST00000469897 TRIM51Q9BSJ1 452 aa12.44□□□□□ -0.42
CPSF4-210ENST00000469897 AICDAQ9GZX7 198 aa12.44□□□□□ -0.42
CPSF4-210ENST00000469897 RUBCNLQ9H714 662 aa12.44□□□□□ -0.42
CPSF4-210ENST00000469897 CLK4Q9HAZ1 481 aaKnown RBP12.44□□□□□ -0.42
CPSF4-210ENST00000469897 PRDM9Q9NQV7 894 aa12.44□□□□□ -0.42
CPSF4-210ENST00000469897 MOCS1Q9NZB8 636 aa12.44□□□□□ -0.42
CPSF4-210ENST00000469897 ZNF835Q9Y2P0 537 aa12.44□□□□□ -0.42
CPSF4-210ENST00000469897 SPTBN1Q01082 2364 aaKnown RBP12.44□□□□□ -0.42
CPSF4-210ENST00000469897 ANKRD12Q6UB98 2062 aa12.44□□□□□ -0.42
CPSF4-210ENST00000469897 CELSR2Q9HCU4 2923 aa12.44□□□□□ -0.42
CPSF4-210ENST00000469897 A0A0G2JN53 185 aa12.43□□□□□ -0.42
CPSF4-210ENST00000469897 FAM95CA0A1B0GW59 222 aa12.43□□□□□ -0.42
CPSF4-210ENST00000469897 TCRBV16S1A1N1A0A5B0 115 aa12.43□□□□□ -0.42
CPSF4-210ENST00000469897 TP73O15350 636 aa12.43□□□□□ -0.42
CPSF4-210ENST00000469897 MLYCDO95822 493 aa12.43□□□□□ -0.42
CPSF4-210ENST00000469897 SERPINA6P08185 405 aa12.43□□□□□ -0.42
CPSF4-210ENST00000469897 C1GALT1C1LP0DN25 315 aa12.43□□□□□ -0.42
CPSF4-210ENST00000469897 RNH1P13489 461 aaKnown RBP12.43□□□□□ -0.42
CPSF4-210ENST00000469897 CYB561P49447 251 aa12.43□□□□□ -0.42
CPSF4-210ENST00000469897 MLF1P58340 268 aa12.43□□□□□ -0.42
CPSF4-210ENST00000469897 ADORA2A-AS1P86434 159 aa12.43□□□□□ -0.42
CPSF4-210ENST00000469897 HSF1Q00613 529 aa12.43□□□□□ -0.42
CPSF4-210ENST00000469897 RUNX2Q13950 521 aa12.43□□□□□ -0.42
CPSF4-210ENST00000469897 FRG1Q14331 258 aaKnown RBP12.43□□□□□ -0.42
CPSF4-210ENST00000469897 FASTKD3Q14CZ7 662 aaKnown RBP12.43□□□□□ -0.42
CPSF4-210ENST00000469897 RNFT1Q5M7Z0 435 aa12.43□□□□□ -0.42
CPSF4-210ENST00000469897 XKRXQ6PP77 449 aa12.43□□□□□ -0.42
CPSF4-210ENST00000469897 RPTNQ6XPR3 784 aa12.43□□□□□ -0.42
CPSF4-210ENST00000469897 BNC2Q6ZN30 1099 aaPredicted RBP12.43□□□□□ -0.42
CPSF4-210ENST00000469897 QSOX2Q6ZRP7 698 aa12.43□□□□□ -0.42
CPSF4-210ENST00000469897 ZNF227Q86WZ6 799 aa12.43□□□□□ -0.42
CPSF4-210ENST00000469897 LGI4Q8N135 537 aa12.43□□□□□ -0.42
CPSF4-210ENST00000469897 ANKRD7Q92527 254 aa12.43□□□□□ -0.42
CPSF4-210ENST00000469897 MAGED4Q96JG8 741 aa12.43□□□□□ -0.42
CPSF4-210ENST00000469897 DEFB126Q9BYW3 111 aa12.43□□□□□ -0.42
CPSF4-210ENST00000469897 KCNF1Q9H3M0 494 aa12.43□□□□□ -0.42
CPSF4-210ENST00000469897 GPAMQ9HCL2 828 aa12.43□□□□□ -0.42
CPSF4-210ENST00000469897 CTNNAL1Q9UBT7 734 aa12.43□□□□□ -0.42
CPSF4-210ENST00000469897 MTO1Q9Y2Z2 717 aaKnown RBP12.43□□□□□ -0.42
CPSF4-210ENST00000469897 SNX24Q9Y343 169 aa12.43□□□□□ -0.42
CPSF4-210ENST00000469897 OARD1Q9Y530 152 aa12.43□□□□□ -0.42
CPSF4-210ENST00000469897 CROCCQ5TZA2 2017 aa12.43□□□□□ -0.42
CPSF4-210ENST00000469897 PCM1Q15154 2024 aa12.42□□□□□ -0.42
CPSF4-210ENST00000469897 IGKV3D-11A0A0A0MRZ8 115 aa12.42□□□□□ -0.42
CPSF4-210ENST00000469897 NCF1BA6NI72 391 aaPredicted RBP12.42□□□□□ -0.42
CPSF4-210ENST00000469897 SAGE2PA6NJ88 616 aa12.42□□□□□ -0.42
CPSF4-210ENST00000469897 USP27XA6NNY8 438 aa12.42□□□□□ -0.42
CPSF4-210ENST00000469897 NCF1CA8MVU1 366 aaPredicted RBP12.42□□□□□ -0.42
CPSF4-210ENST00000469897 SLC25A12O75746 678 aa12.42□□□□□ -0.42
CPSF4-210ENST00000469897 WDR47O94967 919 aa12.42□□□□□ -0.42
CPSF4-210ENST00000469897 SEC31AO94979 1220 aaKnown RBP12.42□□□□□ -0.42
CPSF4-210ENST00000469897 NCF1P14598 390 aaPredicted RBP12.42□□□□□ -0.42
CPSF4-210ENST00000469897 GNAZP19086 355 aa12.42□□□□□ -0.42
CPSF4-210ENST00000469897 HNMTP50135 292 aa12.42□□□□□ -0.42
CPSF4-210ENST00000469897 HLCSP50747 726 aa12.42□□□□□ -0.42
CPSF4-210ENST00000469897 GNG11P61952 73 aa12.42□□□□□ -0.42
CPSF4-210ENST00000469897 MRPS25P82663 173 aaKnown RBP12.42□□□□□ -0.42
CPSF4-210ENST00000469897 CDKL1Q00532 357 aa12.42□□□□□ -0.42
CPSF4-210ENST00000469897 CDSNQ15517 529 aa12.42□□□□□ -0.42
CPSF4-210ENST00000469897 Q6ZPB1 254 aaPredicted RBP12.42□□□□□ -0.42
CPSF4-210ENST00000469897 SLCO4C1Q6ZQN7 724 aa12.42□□□□□ -0.42
CPSF4-210ENST00000469897 NCCRP1Q6ZVX7 275 aaPredicted RBP12.42□□□□□ -0.42
CPSF4-210ENST00000469897 SIAH3Q8IW03 269 aa12.42□□□□□ -0.42
CPSF4-210ENST00000469897 CPSF7Q8N684 471 aaKnown RBP12.42□□□□□ -0.42
CPSF4-210ENST00000469897 FAM98AQ8NCA5 519 aaKnown RBP12.42□□□□□ -0.42
CPSF4-210ENST00000469897 ARMC2Q8NEN0 867 aa12.42□□□□□ -0.42
CPSF4-210ENST00000469897 TMEM125Q96AQ2 219 aa12.42□□□□□ -0.42
CPSF4-210ENST00000469897 FAR2Q96K12 515 aa12.42□□□□□ -0.42
CPSF4-210ENST00000469897 RUNDC3BQ96NL0 473 aa12.42□□□□□ -0.42
CPSF4-210ENST00000469897 TRIM45Q9H8W5 580 aaPredicted RBP12.42□□□□□ -0.42
CPSF4-210ENST00000469897 CHST11Q9NPF2 352 aa12.42□□□□□ -0.42
CPSF4-210ENST00000469897 SMYD2Q9NRG4 433 aa12.42□□□□□ -0.42
CPSF4-210ENST00000469897 PNO1Q9NRX1 252 aaKnown RBP12.42□□□□□ -0.42
CPSF4-210ENST00000469897 POLEQ07864 2286 aa12.42□□□□□ -0.42
CPSF4-210ENST00000469897 HIVEP3Q5T1R4 2406 aa12.42□□□□□ -0.42
CPSF4-210ENST00000469897 LRIT2A6NDA9 550 aa12.41□□□□□ -0.42
CPSF4-210ENST00000469897 EFCAB8A8MWE9 144 aa12.41□□□□□ -0.42
CPSF4-210ENST00000469897 CDK2AP1O14519 115 aa12.41□□□□□ -0.42
CPSF4-210ENST00000469897 TAPBPO15533 448 aa12.41□□□□□ -0.42
CPSF4-210ENST00000469897 NME2P1O60361 137 aa12.41□□□□□ -0.42
CPSF4-210ENST00000469897 MYO1DO94832 1006 aa12.41□□□□□ -0.42
CPSF4-210ENST00000469897 ABOP16442 354 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms