RNA–Protein interactions for RNA: ENST00000469802.5

COL9A3-208, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-208ENST00000469802 CRYABP02511 175 aaKnown RBP15.3■□□□□ 0.04
COL9A3-208ENST00000469802 GNAZP19086 355 aa15.3■□□□□ 0.04
COL9A3-208ENST00000469802 COL8A1P27658 744 aa15.3■□□□□ 0.04
COL9A3-208ENST00000469802 GGT5P36269 586 aa15.3■□□□□ 0.04
COL9A3-208ENST00000469802 DCTP40126 519 aa15.3■□□□□ 0.04
COL9A3-208ENST00000469802 GDF5P43026 501 aa15.3■□□□□ 0.04
COL9A3-208ENST00000469802 KCNK10P57789 538 aa15.3■□□□□ 0.04
COL9A3-208ENST00000469802 OR4D2P58180 307 aa15.3■□□□□ 0.04
COL9A3-208ENST00000469802 RAB8AP61006 207 aa15.3■□□□□ 0.04
COL9A3-208ENST00000469802 NCOA6Q14686 2063 aaPredicted RBP15.3■□□□□ 0.04
COL9A3-208ENST00000469802 MEP1AQ16819 746 aa15.3■□□□□ 0.04
COL9A3-208ENST00000469802 ZNF766Q5HY98 468 aa15.3■□□□□ 0.04
COL9A3-208ENST00000469802 SUN3Q8TAQ9 357 aa15.3■□□□□ 0.04
COL9A3-208ENST00000469802 ANP32BQ92688 251 aaKnown RBP15.3■□□□□ 0.04
COL9A3-208ENST00000469802 SCMH1Q96GD3 660 aa15.3■□□□□ 0.04
COL9A3-208ENST00000469802 CPNE1Q99829 537 aa15.3■□□□□ 0.04
COL9A3-208ENST00000469802 CAB39LQ9H9S4 337 aa15.3■□□□□ 0.04
COL9A3-208ENST00000469802 A0A1B0GUH1 482 aa15.29■□□□□ 0.04
COL9A3-208ENST00000469802 TAPBPO15533 448 aa15.29■□□□□ 0.04
COL9A3-208ENST00000469802 PHGDHO43175 533 aaKnown RBP15.29■□□□□ 0.04
COL9A3-208ENST00000469802 TBX6O95947 436 aaPredicted RBP15.29■□□□□ 0.04
COL9A3-208ENST00000469802 C1GALT1C1LP0DN25 315 aa15.29■□□□□ 0.04
COL9A3-208ENST00000469802 MYBL2P10244 700 aa15.29■□□□□ 0.04
COL9A3-208ENST00000469802 RNH1P13489 461 aaKnown RBP15.29■□□□□ 0.04
COL9A3-208ENST00000469802 GSTM2P28161 218 aa15.29■□□□□ 0.04
COL9A3-208ENST00000469802 HNF4AP41235 474 aa15.29■□□□□ 0.04
COL9A3-208ENST00000469802 SLC12A2P55011 1212 aa15.29■□□□□ 0.04
COL9A3-208ENST00000469802 BTG2P78543 158 aa15.29■□□□□ 0.04
COL9A3-208ENST00000469802 PMP22Q01453 160 aa15.29■□□□□ 0.04
COL9A3-208ENST00000469802 C2orf54Q08AI8 447 aa15.29■□□□□ 0.04
COL9A3-208ENST00000469802 RBBP5Q15291 538 aaKnown RBP15.29■□□□□ 0.04
COL9A3-208ENST00000469802 ZRSR2Q15696 482 aaKnown RBP15.29■□□□□ 0.04
COL9A3-208ENST00000469802 TOR1AIP1Q5JTV8 583 aa15.29■□□□□ 0.04
COL9A3-208ENST00000469802 CDKL4Q5MAI5 379 aa15.29■□□□□ 0.04
COL9A3-208ENST00000469802 ZNF787Q6DD87 383 aa15.29■□□□□ 0.04
COL9A3-208ENST00000469802 TMIGD1Q6UXZ0 262 aa15.29■□□□□ 0.04
COL9A3-208ENST00000469802 MAATS1Q7Z4T9 603 aa15.29■□□□□ 0.04
COL9A3-208ENST00000469802 CA13Q8N1Q1 262 aa15.29■□□□□ 0.04
COL9A3-208ENST00000469802 SLC5A8Q8N695 610 aa15.29■□□□□ 0.04
COL9A3-208ENST00000469802 TTLQ8NG68 377 aa15.29■□□□□ 0.04
COL9A3-208ENST00000469802 CDKL2Q92772 493 aa15.29■□□□□ 0.04
COL9A3-208ENST00000469802 RELTQ969Z4 430 aa15.29■□□□□ 0.04
COL9A3-208ENST00000469802 GAL3ST3Q96A11 431 aa15.29■□□□□ 0.04
COL9A3-208ENST00000469802 TSPAN17Q96FV3 270 aa15.29■□□□□ 0.04
COL9A3-208ENST00000469802 SEC16BQ96JE7 1060 aa15.29■□□□□ 0.04
COL9A3-208ENST00000469802 UBXN10Q96LJ8 280 aa15.29■□□□□ 0.04
COL9A3-208ENST00000469802 PTCHD1Q96NR3 888 aa15.29■□□□□ 0.04
COL9A3-208ENST00000469802 SIGLEC12Q96PQ1 595 aa15.29■□□□□ 0.04
COL9A3-208ENST00000469802 UNKQ9C0B0 810 aaKnown RBP15.29■□□□□ 0.04
COL9A3-208ENST00000469802 PITHD1Q9GZP4 211 aaPredicted RBP15.29■□□□□ 0.04
COL9A3-208ENST00000469802 EHD1Q9H4M9 534 aa15.29■□□□□ 0.04
COL9A3-208ENST00000469802 NT5DC2Q9H857 520 aa15.29■□□□□ 0.04
COL9A3-208ENST00000469802 PRDM9Q9NQV7 894 aa15.29■□□□□ 0.04
COL9A3-208ENST00000469802 GPRC5BQ9NZH0 403 aa15.29■□□□□ 0.04
COL9A3-208ENST00000469802 ASPDHA6ND91 283 aa15.28■□□□□ 0.04
COL9A3-208ENST00000469802 NCF1BA6NI72 391 aaPredicted RBP15.28■□□□□ 0.04
COL9A3-208ENST00000469802 SAGE2PA6NJ88 616 aa15.28■□□□□ 0.04
COL9A3-208ENST00000469802 GABRR3A8MPY1 467 aa15.28■□□□□ 0.04
COL9A3-208ENST00000469802 NCF1CA8MVU1 366 aaPredicted RBP15.28■□□□□ 0.04
COL9A3-208ENST00000469802 CDK2AP1O14519 115 aa15.28■□□□□ 0.04
COL9A3-208ENST00000469802 PRMT3O60678 531 aa15.28■□□□□ 0.04
COL9A3-208ENST00000469802 PRAMEF4O60810 478 aa15.28■□□□□ 0.04
COL9A3-208ENST00000469802 ZG16O60844 167 aa15.28■□□□□ 0.04
COL9A3-208ENST00000469802 B4GALT2O60909 372 aa15.28■□□□□ 0.04
COL9A3-208ENST00000469802 GSTA2P09210 222 aa15.28■□□□□ 0.04
COL9A3-208ENST00000469802 CCDC166P0CW27 439 aa15.28■□□□□ 0.04
COL9A3-208ENST00000469802 NCF1P14598 390 aaPredicted RBP15.28■□□□□ 0.04
COL9A3-208ENST00000469802 CD1DP15813 335 aa15.28■□□□□ 0.04
COL9A3-208ENST00000469802 MAOAP21397 527 aa15.28■□□□□ 0.04
COL9A3-208ENST00000469802 HNRNPH1P31943 449 aaKnown RBP15.28■□□□□ 0.04
COL9A3-208ENST00000469802 GP5P40197 560 aa15.28■□□□□ 0.04
COL9A3-208ENST00000469802 CD96P40200 585 aa15.28■□□□□ 0.04
COL9A3-208ENST00000469802 GPX6P59796 221 aa15.28■□□□□ 0.04
COL9A3-208ENST00000469802 STXBP1P61764 594 aaKnown RBP15.28■□□□□ 0.04
COL9A3-208ENST00000469802 ACTN3Q08043 901 aaPredicted RBP15.28■□□□□ 0.04
COL9A3-208ENST00000469802 SLBPQ14493 270 aaKnown RBP eCLIP15.28■□□□□ 0.04
COL9A3-208ENST00000469802 OR4D1Q15615 310 aa15.28■□□□□ 0.04
COL9A3-208ENST00000469802 OR1C1Q15619 314 aa15.28■□□□□ 0.04
COL9A3-208ENST00000469802 ADPRMQ3LIE5 342 aa15.28■□□□□ 0.04
COL9A3-208ENST00000469802 PRAMEF9Q5VWM5 478 aa15.28■□□□□ 0.04
COL9A3-208ENST00000469802 C1QL3Q5VWW1 255 aa15.28■□□□□ 0.04
COL9A3-208ENST00000469802 GFRALQ6UXV0 394 aa15.28■□□□□ 0.04
COL9A3-208ENST00000469802 VN1R5Q7Z5H4 357 aa15.28■□□□□ 0.04
COL9A3-208ENST00000469802 ARMC10Q8N2F6 343 aa15.28■□□□□ 0.04
COL9A3-208ENST00000469802 TCAIMQ8N3R3 496 aa15.28■□□□□ 0.04
COL9A3-208ENST00000469802 SPATA6LQ8N4H0 392 aa15.28■□□□□ 0.04
COL9A3-208ENST00000469802 KIF2BQ8N4N8 673 aa15.28■□□□□ 0.04
COL9A3-208ENST00000469802 PDPRQ8NCN5 879 aa15.28■□□□□ 0.04
COL9A3-208ENST00000469802 NFAM1Q8NET5 270 aaPredicted RBP15.28■□□□□ 0.04
COL9A3-208ENST00000469802 MS4A6EQ96DS6 147 aa15.28■□□□□ 0.04
COL9A3-208ENST00000469802 WDR34Q96EX3 536 aa15.28■□□□□ 0.04
COL9A3-208ENST00000469802 UTP23Q9BRU9 249 aaKnown RBP15.28■□□□□ 0.04
COL9A3-208ENST00000469802 HES7Q9BYE0 225 aa15.28■□□□□ 0.04
COL9A3-208ENST00000469802 MMACHCQ9Y4U1 282 aa15.28■□□□□ 0.04
COL9A3-208ENST00000469802 CLDN16Q9Y5I7 305 aa15.28■□□□□ 0.04
COL9A3-208ENST00000469802 LRIT2A6NDA9 550 aa15.27■□□□□ 0.04
COL9A3-208ENST00000469802 CLEC3AO75596 197 aa15.27■□□□□ 0.04
COL9A3-208ENST00000469802 NEURL1O76050 574 aa15.27■□□□□ 0.04
COL9A3-208ENST00000469802 UNC5CO95185 931 aa15.27■□□□□ 0.04
COL9A3-208ENST00000469802 STMN1P16949 149 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms