RNA–Protein interactions for RNA: ENST00000469717.5

TPM3-215, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 4,041 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-215ENST00000469717 C11orf16Q9NQ32 467 aa7.65□□□□□ -1.18
TPM3-215ENST00000469717 DNAJC27Q9NZQ0 273 aa7.65□□□□□ -1.18
TPM3-215ENST00000469717 PCDHGA2Q9Y5H1 932 aa7.65□□□□□ -1.18
TPM3-215ENST00000469717 KLK4Q9Y5K2 254 aa7.65□□□□□ -1.18
TPM3-215ENST00000469717 ZSWIM8A7E2V4 1837 aa7.65□□□□□ -1.18
TPM3-215ENST00000469717 WASHC1A8K0Z3 465 aa7.65□□□□□ -1.18
TPM3-215ENST00000469717 SHOXO15266 292 aa7.65□□□□□ -1.18
TPM3-215ENST00000469717 NUPL2O15504 423 aaKnown RBP7.65□□□□□ -1.18
TPM3-215ENST00000469717 RGS14O43566 566 aa7.65□□□□□ -1.18
TPM3-215ENST00000469717 ZNF254O75437 659 aa7.65□□□□□ -1.18
TPM3-215ENST00000469717 SOX14O95416 240 aa7.65□□□□□ -1.18
TPM3-215ENST00000469717 SMIM10L2AP0DMW4 78 aa7.65□□□□□ -1.18
TPM3-215ENST00000469717 SMIM10L2BP0DMW5 78 aa7.65□□□□□ -1.18
TPM3-215ENST00000469717 HOXB9P17482 250 aaPredicted RBP7.65□□□□□ -1.18
TPM3-215ENST00000469717 SYN1P17600 705 aa7.65□□□□□ -1.18
TPM3-215ENST00000469717 OGNP20774 298 aaKnown RBP7.65□□□□□ -1.18
TPM3-215ENST00000469717 ZNF140P52738 457 aaPredicted RBP7.65□□□□□ -1.18
TPM3-215ENST00000469717 MLLT6P55198 1093 aaPredicted RBP7.65□□□□□ -1.18
TPM3-215ENST00000469717 KCNJ10P78508 379 aa7.65□□□□□ -1.18
TPM3-215ENST00000469717 TIGD5Q53EQ6 642 aa7.65□□□□□ -1.18
TPM3-215ENST00000469717 ATXN7L2Q5T6C5 722 aaPredicted RBP7.65□□□□□ -1.18
TPM3-215ENST00000469717 C22orf42Q6IC83 251 aa7.65□□□□□ -1.18
TPM3-215ENST00000469717 TMEM65Q6PI78 240 aa7.65□□□□□ -1.18
TPM3-215ENST00000469717 PLET1Q6UQ28 207 aa7.65□□□□□ -1.18
TPM3-215ENST00000469717 EIF3MQ7L2H7 374 aaKnown RBP7.65□□□□□ -1.18
TPM3-215ENST00000469717 METTL23Q86XA0 190 aa7.65□□□□□ -1.18
TPM3-215ENST00000469717 SLC34A3Q8N130 599 aa7.65□□□□□ -1.18
TPM3-215ENST00000469717 SH3KBP1Q96B97 665 aa7.65□□□□□ -1.18
TPM3-215ENST00000469717 APIPQ96GX9 242 aa7.65□□□□□ -1.18
TPM3-215ENST00000469717 TMEM121BQ9BXQ6 578 aaPredicted RBP7.65□□□□□ -1.18
TPM3-215ENST00000469717 KCNH6Q9H252 994 aa7.65□□□□□ -1.18
TPM3-215ENST00000469717 B3GAT2Q9NPZ5 323 aa7.65□□□□□ -1.18
TPM3-215ENST00000469717 TNFRSF11BO00300 401 aa7.65□□□□□ -1.19
TPM3-215ENST00000469717 IFRD1O00458 451 aaPredicted RBP7.65□□□□□ -1.19
TPM3-215ENST00000469717 WNT9AO14904 365 aa7.65□□□□□ -1.19
TPM3-215ENST00000469717 PCDH17O14917 1159 aa7.65□□□□□ -1.19
TPM3-215ENST00000469717 OTCP00480 354 aa7.65□□□□□ -1.19
TPM3-215ENST00000469717 PDYNP01213 254 aa7.65□□□□□ -1.19
TPM3-215ENST00000469717 ALPPP05187 535 aa7.65□□□□□ -1.19
TPM3-215ENST00000469717 HBQ1P09105 142 aa7.65□□□□□ -1.19
TPM3-215ENST00000469717 SDC1P18827 310 aa7.65□□□□□ -1.19
TPM3-215ENST00000469717 CD52P31358 61 aa7.65□□□□□ -1.19
TPM3-215ENST00000469717 CRYBB2P43320 205 aa7.65□□□□□ -1.19
TPM3-215ENST00000469717 AP2S1P53680 142 aaPredicted RBP7.65□□□□□ -1.19
TPM3-215ENST00000469717 DBPQ10586 325 aaPredicted RBP7.65□□□□□ -1.19
TPM3-215ENST00000469717 LARS2Q15031 903 aaKnown RBP7.65□□□□□ -1.19
TPM3-215ENST00000469717 EXOC3L2Q2M3D2 409 aa7.65□□□□□ -1.19
TPM3-215ENST00000469717 FRMPD2BQ6IN97 320 aa7.65□□□□□ -1.19
TPM3-215ENST00000469717 LPCAT1Q8NF37 534 aa7.65□□□□□ -1.19
TPM3-215ENST00000469717 ADAM2Q99965 735 aa7.65□□□□□ -1.19
TPM3-215ENST00000469717 GABARAPL3Q9BY60 117 aa7.65□□□□□ -1.19
TPM3-215ENST00000469717 ZNF556Q9HAH1 456 aa7.65□□□□□ -1.19
TPM3-215ENST00000469717 RNF186Q9NXI6 227 aa7.65□□□□□ -1.19
TPM3-215ENST00000469717 AFF4Q9UHB7 1163 aaKnown RBP7.65□□□□□ -1.19
TPM3-215ENST00000469717 CMAHPQ9Y471 501 aa7.65□□□□□ -1.19
TPM3-215ENST00000469717 RALGAPA2Q2PPJ7 1873 aa7.64□□□□□ -1.19
TPM3-215ENST00000469717 BTN3A3O00478 584 aa7.64□□□□□ -1.19
TPM3-215ENST00000469717 PSIP1O75475 530 aaKnown RBP7.64□□□□□ -1.19
TPM3-215ENST00000469717 DARSP14868 501 aaKnown RBP7.64□□□□□ -1.19
TPM3-215ENST00000469717 ZNF30P17039 623 aa7.64□□□□□ -1.19
TPM3-215ENST00000469717 CCND3P30281 292 aaPredicted RBP7.64□□□□□ -1.19
TPM3-215ENST00000469717 SSTR2P30874 369 aa7.64□□□□□ -1.19
TPM3-215ENST00000469717 LBX1P52954 281 aa7.64□□□□□ -1.19
TPM3-215ENST00000469717 ASAH1Q13510 395 aa7.64□□□□□ -1.19
TPM3-215ENST00000469717 ZNF235Q14590 738 aa7.64□□□□□ -1.19
TPM3-215ENST00000469717 DGKKQ5KSL6 1271 aa7.64□□□□□ -1.19
TPM3-215ENST00000469717 LRIF1Q5T3J3 769 aa7.64□□□□□ -1.19
TPM3-215ENST00000469717 LDLRAD1Q5T700 205 aa7.64□□□□□ -1.19
TPM3-215ENST00000469717 ANGPTL8Q6UXH0 198 aa7.64□□□□□ -1.19
TPM3-215ENST00000469717 GPR65Q8IYL9 337 aa7.64□□□□□ -1.19
TPM3-215ENST00000469717 LGI4Q8N135 537 aa7.64□□□□□ -1.19
TPM3-215ENST00000469717 CELF5Q8N6W0 485 aaKnown RBP7.64□□□□□ -1.19
TPM3-215ENST00000469717 SCLYQ96I15 445 aa7.64□□□□□ -1.19
TPM3-215ENST00000469717 RAD9AQ99638 391 aa7.64□□□□□ -1.19
TPM3-215ENST00000469717 TAPBPLQ9BX59 468 aa7.64□□□□□ -1.19
TPM3-215ENST00000469717 TRIM45Q9H8W5 580 aaPredicted RBP7.64□□□□□ -1.19
TPM3-215ENST00000469717 COMMD3Q9UBI1 195 aa7.64□□□□□ -1.19
TPM3-215ENST00000469717 MKL2Q9ULH7 1088 aa7.64□□□□□ -1.19
TPM3-215ENST00000469717 RAI2Q9Y5P3 530 aa7.64□□□□□ -1.19
TPM3-215ENST00000469717 A0A075B6Q4 140 aa7.64□□□□□ -1.19
TPM3-215ENST00000469717 RRN3P2A6NIE6 340 aa7.64□□□□□ -1.19
TPM3-215ENST00000469717 E9PQ18 207 aa7.64□□□□□ -1.19
TPM3-215ENST00000469717 MANBAO00462 879 aa7.64□□□□□ -1.19
TPM3-215ENST00000469717 FPGTO14772 594 aa7.64□□□□□ -1.19
TPM3-215ENST00000469717 FABP7O15540 132 aa7.64□□□□□ -1.19
TPM3-215ENST00000469717 EPN2O95208 641 aa7.64□□□□□ -1.19
TPM3-215ENST00000469717 C1QBP02746 253 aa7.64□□□□□ -1.19
TPM3-215ENST00000469717 ZNF865P0CJ78 1059 aaPredicted RBP7.64□□□□□ -1.19
TPM3-215ENST00000469717 HLA-EP13747 358 aa7.64□□□□□ -1.19
TPM3-215ENST00000469717 CTRB1P17538 263 aa7.64□□□□□ -1.19
TPM3-215ENST00000469717 M6PRP20645 277 aa7.64□□□□□ -1.19
TPM3-215ENST00000469717 SPIBQ01892 262 aa7.64□□□□□ -1.19
TPM3-215ENST00000469717 DSC3Q14574 896 aa7.64□□□□□ -1.19
TPM3-215ENST00000469717 PTGES3Q15185 160 aaKnown RBP7.64□□□□□ -1.19
TPM3-215ENST00000469717 DUSP28Q4G0W2 176 aa7.64□□□□□ -1.19
TPM3-215ENST00000469717 MS4A13Q5J8X5 152 aa7.64□□□□□ -1.19
TPM3-215ENST00000469717 CTRB2Q6GPI1 263 aa7.64□□□□□ -1.19
TPM3-215ENST00000469717 FBXL22Q6P050 247 aa7.64□□□□□ -1.19
TPM3-215ENST00000469717 FAM171BQ6P995 826 aa7.64□□□□□ -1.19
TPM3-215ENST00000469717 B3GLCTQ6Y288 498 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms