RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 RPRMLQ8N4K4 120 aa11.47□□□□□ -0.57
HDAC3-204ENST00000469207 MARVELD2Q8N4S9 558 aa11.47□□□□□ -0.57
HDAC3-204ENST00000469207 HORMAD2Q8N7B1 307 aa11.47□□□□□ -0.57
HDAC3-204ENST00000469207 FAM98AQ8NCA5 519 aaKnown RBP11.47□□□□□ -0.57
HDAC3-204ENST00000469207 TRIM58Q8NG06 486 aa11.47□□□□□ -0.57
HDAC3-204ENST00000469207 SMIM10Q96HG1 83 aa11.47□□□□□ -0.57
HDAC3-204ENST00000469207 PWWP2AQ96N64 755 aa11.47□□□□□ -0.57
HDAC3-204ENST00000469207 OLFM1Q99784 485 aa11.47□□□□□ -0.57
HDAC3-204ENST00000469207 FAM167BQ9BTA0 163 aa11.47□□□□□ -0.57
HDAC3-204ENST00000469207 SARGQ9BW04 601 aa11.47□□□□□ -0.57
HDAC3-204ENST00000469207 UCK2Q9BZX2 261 aa11.47□□□□□ -0.57
HDAC3-204ENST00000469207 ENKD1Q9H0I2 346 aa11.47□□□□□ -0.57
HDAC3-204ENST00000469207 PLAC1Q9HBJ0 212 aa11.47□□□□□ -0.57
HDAC3-204ENST00000469207 ZFATQ9P243 1243 aa11.47□□□□□ -0.57
HDAC3-204ENST00000469207 PPT2Q9UMR5 302 aa11.47□□□□□ -0.57
HDAC3-204ENST00000469207 ZFHX3Q15911 3703 aa11.47□□□□□ -0.57
HDAC3-204ENST00000469207 TCRBV16S1A1N1A0A5B0 115 aa11.46□□□□□ -0.57
HDAC3-204ENST00000469207 E9PLN8 166 aa11.46□□□□□ -0.57
HDAC3-204ENST00000469207 PRRG2O14669 202 aa11.46□□□□□ -0.57
HDAC3-204ENST00000469207 PRKNO60260 465 aaPredicted RBP11.46□□□□□ -0.57
HDAC3-204ENST00000469207 MLYCDO95822 493 aa11.46□□□□□ -0.57
HDAC3-204ENST00000469207 TPOP07202 933 aa11.46□□□□□ -0.57
HDAC3-204ENST00000469207 CCND1P24385 295 aa11.46□□□□□ -0.57
HDAC3-204ENST00000469207 PPP2R1BP30154 601 aa11.46□□□□□ -0.57
HDAC3-204ENST00000469207 SSTR2P30874 369 aa11.46□□□□□ -0.57
HDAC3-204ENST00000469207 HLCSP50747 726 aa11.46□□□□□ -0.57
HDAC3-204ENST00000469207 SP140Q13342 867 aa11.46□□□□□ -0.57
HDAC3-204ENST00000469207 PWP1Q13610 501 aa11.46□□□□□ -0.57
HDAC3-204ENST00000469207 RUNX2Q13950 521 aa11.46□□□□□ -0.57
HDAC3-204ENST00000469207 RBBP5Q15291 538 aaKnown RBP11.46□□□□□ -0.57
HDAC3-204ENST00000469207 TESK1Q15569 626 aa11.46□□□□□ -0.57
HDAC3-204ENST00000469207 CYP1B1Q16678 543 aa11.46□□□□□ -0.57
HDAC3-204ENST00000469207 C18orf21Q32NC0 220 aaPredicted RBP11.46□□□□□ -0.57
HDAC3-204ENST00000469207 RNASEH2BQ5TBB1 312 aaKnown RBP11.46□□□□□ -0.57
HDAC3-204ENST00000469207 HECTD2Q5U5R9 776 aa11.46□□□□□ -0.57
HDAC3-204ENST00000469207 CD163Q86VB7 1156 aa11.46□□□□□ -0.57
HDAC3-204ENST00000469207 CA13Q8N1Q1 262 aa11.46□□□□□ -0.57
HDAC3-204ENST00000469207 GPATCH11Q8N954 259 aa11.46□□□□□ -0.57
HDAC3-204ENST00000469207 OR52N2Q8NGI0 321 aa11.46□□□□□ -0.57
HDAC3-204ENST00000469207 NT5CQ8TCD5 201 aa11.46□□□□□ -0.57
HDAC3-204ENST00000469207 CA5BP1Q8WTZ4 195 aa11.46□□□□□ -0.57
HDAC3-204ENST00000469207 SLC5A11Q8WWX8 675 aa11.46□□□□□ -0.57
HDAC3-204ENST00000469207 VKORC1Q9BQB6 163 aa11.46□□□□□ -0.57
HDAC3-204ENST00000469207 HAUS8Q9BT25 410 aa11.46□□□□□ -0.57
HDAC3-204ENST00000469207 DEFB126Q9BYW3 111 aa11.46□□□□□ -0.57
HDAC3-204ENST00000469207 DEFB127Q9H1M4 99 aa11.46□□□□□ -0.57
HDAC3-204ENST00000469207 TRIM45Q9H8W5 580 aaPredicted RBP11.46□□□□□ -0.57
HDAC3-204ENST00000469207 ZFP69BQ9UJL9 534 aa11.46□□□□□ -0.57
HDAC3-204ENST00000469207 ZNF223Q9UK11 482 aaPredicted RBP11.46□□□□□ -0.57
HDAC3-204ENST00000469207 SLC22A14Q9Y267 594 aa11.46□□□□□ -0.57
HDAC3-204ENST00000469207 CCDC168Q8NDH2 2452 aa11.45□□□□□ -0.58
HDAC3-204ENST00000469207 IGKV3D-11A0A0A0MRZ8 115 aa11.45□□□□□ -0.58
HDAC3-204ENST00000469207 PINLYPA6NC86 204 aa11.45□□□□□ -0.58
HDAC3-204ENST00000469207 NKX2-6A6NCS4 301 aa11.45□□□□□ -0.58
HDAC3-204ENST00000469207 SAGE2PA6NJ88 616 aa11.45□□□□□ -0.58
HDAC3-204ENST00000469207 TGFBR3LH3BV60 316 aa11.45□□□□□ -0.58
HDAC3-204ENST00000469207 CDC7O00311 574 aa11.45□□□□□ -0.58
HDAC3-204ENST00000469207 PEX1O43933 1283 aa11.45□□□□□ -0.58
HDAC3-204ENST00000469207 MYO1DO94832 1006 aa11.45□□□□□ -0.58
HDAC3-204ENST00000469207 PGAM1P18669 254 aa11.45□□□□□ -0.58
HDAC3-204ENST00000469207 SAT1P21673 171 aa11.45□□□□□ -0.58
HDAC3-204ENST00000469207 JAK1P23458 1154 aa11.45□□□□□ -0.58
HDAC3-204ENST00000469207 TRHRP34981 398 aaPredicted RBP11.45□□□□□ -0.58
HDAC3-204ENST00000469207 PTGS2P35354 604 aa11.45□□□□□ -0.58
HDAC3-204ENST00000469207 GDF5P43026 501 aa11.45□□□□□ -0.58
HDAC3-204ENST00000469207 HNRNPFP52597 415 aaKnown RBP11.45□□□□□ -0.58
HDAC3-204ENST00000469207 RIPPLY3P57055 190 aa11.45□□□□□ -0.58
HDAC3-204ENST00000469207 IL2P60568 153 aa11.45□□□□□ -0.58
HDAC3-204ENST00000469207 CCZ1BP86790 482 aa11.45□□□□□ -0.58
HDAC3-204ENST00000469207 CCZ1P86791 482 aaPredicted RBP11.45□□□□□ -0.58
HDAC3-204ENST00000469207 RGS1Q08116 209 aa11.45□□□□□ -0.58
HDAC3-204ENST00000469207 PDAP1Q13442 181 aaKnown RBP11.45□□□□□ -0.58
HDAC3-204ENST00000469207 CMPK2Q5EBM0 449 aa11.45□□□□□ -0.58
HDAC3-204ENST00000469207 TEDDM1Q5T9Z0 273 aa11.45□□□□□ -0.58
HDAC3-204ENST00000469207 LRRC8EQ6NSJ5 796 aa11.45□□□□□ -0.58
HDAC3-204ENST00000469207 TRMT10BQ6PF06 316 aaKnown RBP11.45□□□□□ -0.58
HDAC3-204ENST00000469207 QSOX2Q6ZRP7 698 aa11.45□□□□□ -0.58
HDAC3-204ENST00000469207 THOC6Q86W42 341 aaKnown RBP11.45□□□□□ -0.58
HDAC3-204ENST00000469207 CCDC71Q8IV32 467 aaPredicted RBP11.45□□□□□ -0.58
HDAC3-204ENST00000469207 PPIL6Q8IXY8 311 aa11.45□□□□□ -0.58
HDAC3-204ENST00000469207 LGI4Q8N135 537 aa11.45□□□□□ -0.58
HDAC3-204ENST00000469207 ACBD4Q8NC06 268 aa11.45□□□□□ -0.58
HDAC3-204ENST00000469207 APCDD1LQ8NCL9 501 aa11.45□□□□□ -0.58
HDAC3-204ENST00000469207 TMEM52Q8NDY8 209 aa11.45□□□□□ -0.58
HDAC3-204ENST00000469207 FAM57AQ8TBR7 257 aa11.45□□□□□ -0.58
HDAC3-204ENST00000469207 CREB3L4Q8TEY5 395 aa11.45□□□□□ -0.58
HDAC3-204ENST00000469207 TMEM125Q96AQ2 219 aa11.45□□□□□ -0.58
HDAC3-204ENST00000469207 FBXL8Q96CD0 374 aa11.45□□□□□ -0.58
HDAC3-204ENST00000469207 SPOCK3Q9BQ16 436 aa11.45□□□□□ -0.58
HDAC3-204ENST00000469207 FAM129AQ9BZQ8 928 aa11.45□□□□□ -0.58
HDAC3-204ENST00000469207 SLC6A16Q9GZN6 736 aa11.45□□□□□ -0.58
HDAC3-204ENST00000469207 PPANQ9NQ55 473 aaKnown RBP11.45□□□□□ -0.58
HDAC3-204ENST00000469207 PRDM9Q9NQV7 894 aa11.45□□□□□ -0.58
HDAC3-204ENST00000469207 PNO1Q9NRX1 252 aaKnown RBP11.45□□□□□ -0.58
HDAC3-204ENST00000469207 DEPPQ9NTK1 212 aa11.45□□□□□ -0.58
HDAC3-204ENST00000469207 FBXW2Q9UKT8 454 aa11.45□□□□□ -0.58
HDAC3-204ENST00000469207 VWA7Q9Y334 891 aa11.45□□□□□ -0.58
HDAC3-204ENST00000469207 CLDN16Q9Y5I7 305 aa11.45□□□□□ -0.58
HDAC3-204ENST00000469207 TRBV11-1A0A0K0K1C0 115 aa11.44□□□□□ -0.58
HDAC3-204ENST00000469207 TFECO14948 347 aaPredicted RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms