RNA–Protein interactions for RNA: ENST00000468894.1

XRN1-207, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-207ENST00000468894 C11orf52Q96A22 123 aa4.3□□□□□ -1.72
XRN1-207ENST00000468894 BSCL2Q96G97 398 aaPredicted RBP4.3□□□□□ -1.72
XRN1-207ENST00000468894 ERO1AQ96HE7 468 aa4.3□□□□□ -1.72
XRN1-207ENST00000468894 PAPOLGQ9BWT3 736 aaKnown RBP4.3□□□□□ -1.72
XRN1-207ENST00000468894 DPEP2Q9H4A9 486 aa4.3□□□□□ -1.72
XRN1-207ENST00000468894 MINDY3Q9H8M7 445 aa4.3□□□□□ -1.72
XRN1-207ENST00000468894 SPATA31D1Q6ZQQ2 1576 aa4.29□□□□□ -1.72
XRN1-207ENST00000468894 A0A0B4J203 849 aa4.29□□□□□ -1.72
XRN1-207ENST00000468894 SRSF10O75494 262 aaKnown RBP4.29□□□□□ -1.72
XRN1-207ENST00000468894 HOXD4P09016 255 aaPredicted RBP4.29□□□□□ -1.72
XRN1-207ENST00000468894 IL4RP24394 825 aa4.29□□□□□ -1.72
XRN1-207ENST00000468894 GIFP27352 417 aa4.29□□□□□ -1.72
XRN1-207ENST00000468894 PKLRP30613 574 aa4.29□□□□□ -1.72
XRN1-207ENST00000468894 LRRC37A5PQ49AS3 106 aa4.29□□□□□ -1.72
XRN1-207ENST00000468894 MPP7Q5T2T1 576 aa4.29□□□□□ -1.72
XRN1-207ENST00000468894 C15orf52Q6ZUT6 534 aaKnown RBP4.29□□□□□ -1.72
XRN1-207ENST00000468894 Q6ZVQ6 151 aa4.29□□□□□ -1.72
XRN1-207ENST00000468894 PHLDB2Q86SQ0 1253 aa4.29□□□□□ -1.72
XRN1-207ENST00000468894 DZIP1Q86YF9 867 aaKnown RBP4.29□□□□□ -1.72
XRN1-207ENST00000468894 ERC1Q8IUD2 1116 aa4.29□□□□□ -1.72
XRN1-207ENST00000468894 PHC2Q8IXK0 858 aa4.29□□□□□ -1.72
XRN1-207ENST00000468894 TDHQ8IZJ6 230 aa4.29□□□□□ -1.72
XRN1-207ENST00000468894 CD99L2Q8TCZ2 262 aa4.29□□□□□ -1.72
XRN1-207ENST00000468894 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.29□□□□□ -1.72
XRN1-207ENST00000468894 SSC4DQ8WTU2 575 aa4.29□□□□□ -1.72
XRN1-207ENST00000468894 ZMAT2Q96NC0 199 aaKnown RBP4.29□□□□□ -1.72
XRN1-207ENST00000468894 PCDHB18PQ96TA0 734 aa4.29□□□□□ -1.72
XRN1-207ENST00000468894 CHCHD5Q9BSY4 110 aa4.29□□□□□ -1.72
XRN1-207ENST00000468894 IL1RAPQ9NPH3 570 aa4.29□□□□□ -1.72
XRN1-207ENST00000468894 SHISA9B4DS77 424 aa4.28□□□□□ -1.72
XRN1-207ENST00000468894 LMO7DNF2Z398 122 aa4.28□□□□□ -1.72
XRN1-207ENST00000468894 PCP11498 1178 aaKnown RBP4.28□□□□□ -1.72
XRN1-207ENST00000468894 FEN1P39748 380 aaKnown RBP4.28□□□□□ -1.72
XRN1-207ENST00000468894 ATP4BP51164 291 aa4.28□□□□□ -1.72
XRN1-207ENST00000468894 ABCE1P61221 599 aaKnown RBP4.28□□□□□ -1.72
XRN1-207ENST00000468894 ERVK-16P61578 105 aa4.28□□□□□ -1.72
XRN1-207ENST00000468894 FOLH1Q04609 750 aa4.28□□□□□ -1.72
XRN1-207ENST00000468894 RIGQ13278 110 aa4.28□□□□□ -1.72
XRN1-207ENST00000468894 PSMD6Q15008 389 aa4.28□□□□□ -1.72
XRN1-207ENST00000468894 PPA1Q15181 289 aa4.28□□□□□ -1.72
XRN1-207ENST00000468894 TWISTNBQ3B726 338 aaPredicted RBP4.28□□□□□ -1.72
XRN1-207ENST00000468894 ZNF841Q6ZN19 808 aa4.28□□□□□ -1.72
XRN1-207ENST00000468894 GLRX5Q86SX6 157 aa4.28□□□□□ -1.72
XRN1-207ENST00000468894 VSIG1Q86XK7 387 aa4.28□□□□□ -1.72
XRN1-207ENST00000468894 SPEM1Q8N4L4 309 aa4.28□□□□□ -1.72
XRN1-207ENST00000468894 SPPL2AQ8TCT8 520 aa4.28□□□□□ -1.72
XRN1-207ENST00000468894 SAP25Q8TEE9 199 aa4.28□□□□□ -1.72
XRN1-207ENST00000468894 DNASE1L2Q92874 299 aa4.28□□□□□ -1.72
XRN1-207ENST00000468894 ATF6BQ99941 703 aa4.28□□□□□ -1.72
XRN1-207ENST00000468894 HEXA-AS1Q9H8Q6 139 aa4.28□□□□□ -1.72
XRN1-207ENST00000468894 C3orf14Q9HBI5 128 aa4.28□□□□□ -1.72
XRN1-207ENST00000468894 NCKAP1Q9Y2A7 1128 aa4.28□□□□□ -1.72
XRN1-207ENST00000468894 HBS1LQ9Y450 684 aaKnown RBP4.28□□□□□ -1.72
XRN1-207ENST00000468894 IQCMA0A1B0GVH7 501 aa4.27□□□□□ -1.73
XRN1-207ENST00000468894 A8MU76 341 aa4.27□□□□□ -1.73
XRN1-207ENST00000468894 ARHGEF33A8MVX0 844 aa4.27□□□□□ -1.73
XRN1-207ENST00000468894 ZNF749O43361 778 aa4.27□□□□□ -1.73
XRN1-207ENST00000468894 TNFSF12O43508 249 aa4.27□□□□□ -1.73
XRN1-207ENST00000468894 ACSL4O60488 711 aa4.27□□□□□ -1.73
XRN1-207ENST00000468894 FOLR2P14207 255 aa4.27□□□□□ -1.73
XRN1-207ENST00000468894 CTNNA2P26232 953 aa4.27□□□□□ -1.73
XRN1-207ENST00000468894 SRD5A2P31213 254 aa4.27□□□□□ -1.73
XRN1-207ENST00000468894 NDUFV3P56181 108 aaKnown RBP4.27□□□□□ -1.73
XRN1-207ENST00000468894 FCHO2Q0JRZ9 810 aa4.27□□□□□ -1.73
XRN1-207ENST00000468894 MLF2Q15773 248 aaPredicted RBP4.27□□□□□ -1.73
XRN1-207ENST00000468894 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.27□□□□□ -1.73
XRN1-207ENST00000468894 TCEAL6Q6IPX3 200 aa4.27□□□□□ -1.73
XRN1-207ENST00000468894 PET117Q6UWS5 81 aa4.27□□□□□ -1.73
XRN1-207ENST00000468894 CARM1Q86X55 608 aa4.27□□□□□ -1.73
XRN1-207ENST00000468894 RNF130Q86XS8 419 aa4.27□□□□□ -1.73
XRN1-207ENST00000468894 SPAG16Q8N0X2 631 aa4.27□□□□□ -1.73
XRN1-207ENST00000468894 MR1Q95460 341 aa4.27□□□□□ -1.73
XRN1-207ENST00000468894 FAM162AQ96A26 154 aa4.27□□□□□ -1.73
XRN1-207ENST00000468894 CCDC28BQ9BUN5 200 aa4.27□□□□□ -1.73
XRN1-207ENST00000468894 PUS3Q9BZE2 481 aaKnown RBP4.27□□□□□ -1.73
XRN1-207ENST00000468894 MRGBPQ9NV56 204 aa4.27□□□□□ -1.73
XRN1-207ENST00000468894 TMOD3Q9NYL9 352 aa4.27□□□□□ -1.73
XRN1-207ENST00000468894 GTSE1Q9NYZ3 720 aa4.27□□□□□ -1.73
XRN1-207ENST00000468894 DBF4Q9UBU7 674 aaPredicted RBP4.27□□□□□ -1.73
XRN1-207ENST00000468894 PCDHGA1Q9Y5H4 931 aa4.27□□□□□ -1.73
XRN1-207ENST00000468894 ZNF732B4DXR9 585 aa4.26□□□□□ -1.73
XRN1-207ENST00000468894 ST8SIA3O43173 380 aa4.26□□□□□ -1.73
XRN1-207ENST00000468894 TBCAO75347 108 aaKnown RBP4.26□□□□□ -1.73
XRN1-207ENST00000468894 RLN1P04808 185 aa4.26□□□□□ -1.73
XRN1-207ENST00000468894 SCG2P13521 617 aa4.26□□□□□ -1.73
XRN1-207ENST00000468894 PIK3R1P27986 724 aa4.26□□□□□ -1.73
XRN1-207ENST00000468894 KRT2P35908 639 aa4.26□□□□□ -1.73
XRN1-207ENST00000468894 PTGER3P43115 390 aa4.26□□□□□ -1.73
XRN1-207ENST00000468894 LIMK2P53671 638 aa4.26□□□□□ -1.73
XRN1-207ENST00000468894 EVCP57679 992 aa4.26□□□□□ -1.73
XRN1-207ENST00000468894 RPP38P78345 283 aaKnown RBP4.26□□□□□ -1.73
XRN1-207ENST00000468894 ZFP36L1Q07352 338 aaKnown RBP4.26□□□□□ -1.73
XRN1-207ENST00000468894 TIPARPQ7Z3E1 657 aaKnown RBP4.26□□□□□ -1.73
XRN1-207ENST00000468894 SLC25A42Q86VD7 318 aa4.26□□□□□ -1.73
XRN1-207ENST00000468894 KCNMB4Q86W47 210 aa4.26□□□□□ -1.73
XRN1-207ENST00000468894 DEPDC1BQ8WUY9 529 aa4.26□□□□□ -1.73
XRN1-207ENST00000468894 SGF29Q96ES7 293 aa4.26□□□□□ -1.73
XRN1-207ENST00000468894 PRMT1Q99873 361 aaKnown RBP4.26□□□□□ -1.73
XRN1-207ENST00000468894 NACAP1Q9BZK3 213 aa4.26□□□□□ -1.73
XRN1-207ENST00000468894 OCR1Q9BZK8 76 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms