RNA–Protein interactions for RNA: ENST00000468385.1

PTPN7-207, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-207ENST00000468385 HCFC1P51610 2035 aa12.21□□□□□ -0.45
PTPN7-207ENST00000468385 MTORP42345 2549 aa12.21□□□□□ -0.45
PTPN7-207ENST00000468385 TRBC2A0A5B9 178 aa12.21□□□□□ -0.45
PTPN7-207ENST00000468385 CTAGE15A4D2H0 777 aa12.21□□□□□ -0.45
PTPN7-207ENST00000468385 SDR42E2A6NKP2 422 aa12.21□□□□□ -0.45
PTPN7-207ENST00000468385 A8MUA0 341 aa12.21□□□□□ -0.45
PTPN7-207ENST00000468385 FOXO6A8MYZ6 492 aa12.21□□□□□ -0.45
PTPN7-207ENST00000468385 KLRC4-KLRK1H3BQV0 150 aa12.21□□□□□ -0.45
PTPN7-207ENST00000468385 SLC16A5O15375 505 aa12.21□□□□□ -0.45
PTPN7-207ENST00000468385 ZNF888P0CJ79 500 aaPredicted RBP12.21□□□□□ -0.45
PTPN7-207ENST00000468385 MAOAP21397 527 aa12.21□□□□□ -0.45
PTPN7-207ENST00000468385 GPR85P60893 370 aa12.21□□□□□ -0.45
PTPN7-207ENST00000468385 SKP1P63208 163 aa12.21□□□□□ -0.45
PTPN7-207ENST00000468385 DHX9Q08211 1270 aaKnown RBP12.21□□□□□ -0.45
PTPN7-207ENST00000468385 GPS1Q13098 491 aa12.21□□□□□ -0.45
PTPN7-207ENST00000468385 EMC4Q5J8M3 183 aa12.21□□□□□ -0.45
PTPN7-207ENST00000468385 NIPAL1Q6NVV3 410 aa12.21□□□□□ -0.45
PTPN7-207ENST00000468385 MDGA2Q7Z553 956 aa12.21□□□□□ -0.45
PTPN7-207ENST00000468385 STRA8Q7Z7C7 330 aa12.21□□□□□ -0.45
PTPN7-207ENST00000468385 CTAGE6Q86UF2 777 aa12.21□□□□□ -0.45
PTPN7-207ENST00000468385 ZFP62Q8NB50 900 aaPredicted RBP12.21□□□□□ -0.45
PTPN7-207ENST00000468385 APCDD1LQ8NCL9 501 aa12.21□□□□□ -0.45
PTPN7-207ENST00000468385 OR52N2Q8NGI0 321 aa12.21□□□□□ -0.45
PTPN7-207ENST00000468385 UTP15Q8TED0 518 aaKnown RBP12.21□□□□□ -0.45
PTPN7-207ENST00000468385 RND1Q92730 232 aa12.21□□□□□ -0.45
PTPN7-207ENST00000468385 PYCR2Q96C36 320 aa12.21□□□□□ -0.45
PTPN7-207ENST00000468385 SNF8Q96H20 258 aa12.21□□□□□ -0.45
PTPN7-207ENST00000468385 SERPINB12Q96P63 405 aa12.21□□□□□ -0.45
PTPN7-207ENST00000468385 OR4K3Q96R72 315 aa12.21□□□□□ -0.45
PTPN7-207ENST00000468385 NDNQ99608 321 aa12.21□□□□□ -0.45
PTPN7-207ENST00000468385 HAUS8Q9BT25 410 aa12.21□□□□□ -0.45
PTPN7-207ENST00000468385 DEFB126Q9BYW3 111 aa12.21□□□□□ -0.45
PTPN7-207ENST00000468385 RBSNQ9H1K0 784 aa12.21□□□□□ -0.45
PTPN7-207ENST00000468385 TP63Q9H3D4 680 aaPredicted RBP12.21□□□□□ -0.45
PTPN7-207ENST00000468385 C20orf96Q9NUD7 363 aaPredicted RBP12.21□□□□□ -0.45
PTPN7-207ENST00000468385 VPS13CQ709C8 3753 aa12.21□□□□□ -0.46
PTPN7-207ENST00000468385 GOLGA8MH3BSY2 632 aa12.2□□□□□ -0.46
PTPN7-207ENST00000468385 SERPIND1P05546 499 aa12.2□□□□□ -0.46
PTPN7-207ENST00000468385 HOXD4P09016 255 aaPredicted RBP12.2□□□□□ -0.46
PTPN7-207ENST00000468385 SMIM10L1P0DMW3 83 aa12.2□□□□□ -0.46
PTPN7-207ENST00000468385 DNAJA1P31689 397 aaKnown RBP12.2□□□□□ -0.46
PTPN7-207ENST00000468385 MAGEA3P43357 314 aa12.2□□□□□ -0.46
PTPN7-207ENST00000468385 SCTRP47872 440 aa12.2□□□□□ -0.46
PTPN7-207ENST00000468385 RGS4P49798 205 aa12.2□□□□□ -0.46
PTPN7-207ENST00000468385 RGS1Q08116 209 aa12.2□□□□□ -0.46
PTPN7-207ENST00000468385 HYAL2Q12891 473 aa12.2□□□□□ -0.46
PTPN7-207ENST00000468385 HSP90AA5PQ58FG0 334 aa12.2□□□□□ -0.46
PTPN7-207ENST00000468385 CATSPEREQ5SY80 951 aa12.2□□□□□ -0.46
PTPN7-207ENST00000468385 UGT3A1Q6NUS8 523 aa12.2□□□□□ -0.46
PTPN7-207ENST00000468385 ARHGAP11AQ6P4F7 1023 aa12.2□□□□□ -0.46
PTPN7-207ENST00000468385 PAQR3Q6TCH7 311 aa12.2□□□□□ -0.46
PTPN7-207ENST00000468385 ABHD13Q7L211 337 aa12.2□□□□□ -0.46
PTPN7-207ENST00000468385 CCDC71Q8IV32 467 aaPredicted RBP12.2□□□□□ -0.46
PTPN7-207ENST00000468385 CYP4Z2PQ8N1L4 340 aa12.2□□□□□ -0.46
PTPN7-207ENST00000468385 MYO1HQ8N1T3 1032 aa12.2□□□□□ -0.46
PTPN7-207ENST00000468385 MCUQ8NE86 351 aa12.2□□□□□ -0.46
PTPN7-207ENST00000468385 OR56A3Q8NH54 315 aa12.2□□□□□ -0.46
PTPN7-207ENST00000468385 CALML6Q8TD86 181 aa12.2□□□□□ -0.46
PTPN7-207ENST00000468385 NRGNQ92686 78 aa12.2□□□□□ -0.46
PTPN7-207ENST00000468385 SMIM10Q96HG1 83 aa12.2□□□□□ -0.46
PTPN7-207ENST00000468385 ZNF559Q9BR84 538 aa12.2□□□□□ -0.46
PTPN7-207ENST00000468385 TMUB1Q9BVT8 246 aa12.2□□□□□ -0.46
PTPN7-207ENST00000468385 KCNJ16Q9NPI9 418 aa12.2□□□□□ -0.46
PTPN7-207ENST00000468385 PRDM9Q9NQV7 894 aa12.2□□□□□ -0.46
PTPN7-207ENST00000468385 IARS2Q9NSE4 1012 aaKnown RBP12.2□□□□□ -0.46
PTPN7-207ENST00000468385 ZFATQ9P243 1243 aa12.2□□□□□ -0.46
PTPN7-207ENST00000468385 KCNN3Q9UGI6 736 aa12.2□□□□□ -0.46
PTPN7-207ENST00000468385 ZFP69BQ9UJL9 534 aa12.2□□□□□ -0.46
PTPN7-207ENST00000468385 ZNF223Q9UK11 482 aaPredicted RBP12.2□□□□□ -0.46
PTPN7-207ENST00000468385 DNHD1Q96M86 4753 aa12.19□□□□□ -0.46
PTPN7-207ENST00000468385 TRBV11-1A0A0K0K1C0 115 aa12.19□□□□□ -0.46
PTPN7-207ENST00000468385 USP27XA6NNY8 438 aa12.19□□□□□ -0.46
PTPN7-207ENST00000468385 C4orf51C9J302 202 aa12.19□□□□□ -0.46
PTPN7-207ENST00000468385 ITGA10O75578 1167 aa12.19□□□□□ -0.46
PTPN7-207ENST00000468385 PDE9AO76083 593 aa12.19□□□□□ -0.46
PTPN7-207ENST00000468385 KRT14P02533 472 aa12.19□□□□□ -0.46
PTPN7-207ENST00000468385 HIST1H2AGP0C0S8 130 aaPredicted RBP12.19□□□□□ -0.46
PTPN7-207ENST00000468385 HIST1H2ADP20671 130 aa12.19□□□□□ -0.46
PTPN7-207ENST00000468385 GABRB3P28472 473 aa12.19□□□□□ -0.46
PTPN7-207ENST00000468385 CLCN2P51788 898 aa12.19□□□□□ -0.46
PTPN7-207ENST00000468385 NUP107P57740 925 aa12.19□□□□□ -0.46
PTPN7-207ENST00000468385 RAB8AP61006 207 aa12.19□□□□□ -0.46
PTPN7-207ENST00000468385 PMPCAQ10713 525 aa12.19□□□□□ -0.46
PTPN7-207ENST00000468385 DUPD1Q68J44 220 aa12.19□□□□□ -0.46
PTPN7-207ENST00000468385 KIAA0408Q6ZU52 694 aa12.19□□□□□ -0.46
PTPN7-207ENST00000468385 TMEM200AQ86VY9 491 aa12.19□□□□□ -0.46
PTPN7-207ENST00000468385 PALM2Q8IXS6 379 aa12.19□□□□□ -0.46
PTPN7-207ENST00000468385 CA13Q8N1Q1 262 aa12.19□□□□□ -0.46
PTPN7-207ENST00000468385 TMEM156Q8N614 296 aa12.19□□□□□ -0.46
PTPN7-207ENST00000468385 C2CD4AQ8NCU7 369 aaPredicted RBP12.19□□□□□ -0.46
PTPN7-207ENST00000468385 B3GNT7Q8NFL0 401 aa12.19□□□□□ -0.46
PTPN7-207ENST00000468385 SLC5A11Q8WWX8 675 aa12.19□□□□□ -0.46
PTPN7-207ENST00000468385 LINGO1Q96FE5 620 aa12.19□□□□□ -0.46
PTPN7-207ENST00000468385 SEC16BQ96JE7 1060 aa12.19□□□□□ -0.46
PTPN7-207ENST00000468385 HIST1H2AHQ96KK5 128 aa12.19□□□□□ -0.46
PTPN7-207ENST00000468385 SIGLEC10Q96LC7 697 aa12.19□□□□□ -0.46
PTPN7-207ENST00000468385 HIST1H2AJQ99878 128 aa12.19□□□□□ -0.46
PTPN7-207ENST00000468385 H2AFJQ9BTM1 129 aa12.19□□□□□ -0.46
PTPN7-207ENST00000468385 SLC6A16Q9GZN6 736 aa12.19□□□□□ -0.46
PTPN7-207ENST00000468385 AICDAQ9GZX7 198 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms