RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 ASPDHA6ND91 283 aa22.94■■□□□ 1.26
PTCH1-210ENST00000468211 NDC80O14777 642 aa22.94■■□□□ 1.26
PTCH1-210ENST00000468211 ZNHIT1O43257 154 aa22.94■■□□□ 1.26
PTCH1-210ENST00000468211 PRMT3O60678 531 aa22.94■■□□□ 1.26
PTCH1-210ENST00000468211 SLC19A2O60779 497 aa22.94■■□□□ 1.26
PTCH1-210ENST00000468211 CD46P15529 392 aa22.94■■□□□ 1.26
PTCH1-210ENST00000468211 EEF1DP29692 281 aaKnown RBP22.94■■□□□ 1.26
PTCH1-210ENST00000468211 GDF5P43026 501 aa22.94■■□□□ 1.26
PTCH1-210ENST00000468211 TSNQ15631 228 aaKnown RBP22.94■■□□□ 1.26
PTCH1-210ENST00000468211 C3AR1Q16581 482 aa22.94■■□□□ 1.26
PTCH1-210ENST00000468211 TOR1AIP1Q5JTV8 583 aa22.94■■□□□ 1.26
PTCH1-210ENST00000468211 QSOX2Q6ZRP7 698 aa22.94■■□□□ 1.26
PTCH1-210ENST00000468211 GALNTL5Q7Z4T8 443 aa22.94■■□□□ 1.26
PTCH1-210ENST00000468211 MRGPRGQ86SM5 289 aa22.94■■□□□ 1.26
PTCH1-210ENST00000468211 RPS19BP1Q86WX3 136 aaKnown RBP22.94■■□□□ 1.26
PTCH1-210ENST00000468211 ZNF227Q86WZ6 799 aa22.94■■□□□ 1.26
PTCH1-210ENST00000468211 NKAPQ8N5F7 415 aaKnown RBP22.94■■□□□ 1.26
PTCH1-210ENST00000468211 NFAM1Q8NET5 270 aaPredicted RBP22.94■■□□□ 1.26
PTCH1-210ENST00000468211 TRPV3Q8NET8 790 aa22.94■■□□□ 1.26
PTCH1-210ENST00000468211 EGFL8Q99944 293 aa22.94■■□□□ 1.26
PTCH1-210ENST00000468211 MCMBPQ9BTE3 642 aa22.94■■□□□ 1.26
PTCH1-210ENST00000468211 TINAGQ9UJW2 476 aa22.94■■□□□ 1.26
PTCH1-210ENST00000468211 OARD1Q9Y530 152 aa22.94■■□□□ 1.26
PTCH1-210ENST00000468211 KCNE2Q9Y6J6 123 aa22.94■■□□□ 1.26
PTCH1-210ENST00000468211 TCRBV16S1A1N1A0A5B0 115 aa22.93■■□□□ 1.26
PTCH1-210ENST00000468211 A8MUA0 341 aa22.93■■□□□ 1.26
PTCH1-210ENST00000468211 E7ESA3 106 aa22.93■■□□□ 1.26
PTCH1-210ENST00000468211 SP1P08047 785 aa22.93■■□□□ 1.26
PTCH1-210ENST00000468211 TPP2P29144 1249 aaPredicted RBP22.93■■□□□ 1.26
PTCH1-210ENST00000468211 TAS2R50P59544 299 aa22.93■■□□□ 1.26
PTCH1-210ENST00000468211 SKP1P63208 163 aa22.93■■□□□ 1.26
PTCH1-210ENST00000468211 MRPS25P82663 173 aaKnown RBP22.93■■□□□ 1.26
PTCH1-210ENST00000468211 CDKL1Q00532 357 aa22.93■■□□□ 1.26
PTCH1-210ENST00000468211 ART3Q13508 389 aa22.93■■□□□ 1.26
PTCH1-210ENST00000468211 NIPAL1Q6NVV3 410 aa22.93■■□□□ 1.26
PTCH1-210ENST00000468211 PNPLA5Q7Z6Z6 429 aaPredicted RBP22.93■■□□□ 1.26
PTCH1-210ENST00000468211 LGI4Q8N135 537 aa22.93■■□□□ 1.26
PTCH1-210ENST00000468211 CA13Q8N1Q1 262 aa22.93■■□□□ 1.26
PTCH1-210ENST00000468211 ANKRD7Q92527 254 aa22.93■■□□□ 1.26
PTCH1-210ENST00000468211 GPR137Q96N19 417 aa22.93■■□□□ 1.26
PTCH1-210ENST00000468211 LRFN1Q9P244 771 aa22.93■■□□□ 1.26
PTCH1-210ENST00000468211 SUCOQ9UBS9 1254 aaKnown RBP22.93■■□□□ 1.26
PTCH1-210ENST00000468211 PKDREJQ9NTG1 2253 aa22.92■■□□□ 1.26
PTCH1-210ENST00000468211 SAGE2PA6NJ88 616 aa22.92■■□□□ 1.26
PTCH1-210ENST00000468211 FANCGO15287 622 aa22.92■■□□□ 1.26
PTCH1-210ENST00000468211 SERPINA6P08185 405 aa22.92■■□□□ 1.26
PTCH1-210ENST00000468211 RNH1P13489 461 aaKnown RBP22.92■■□□□ 1.26
PTCH1-210ENST00000468211 RPL21P46778 160 aaKnown RBP22.92■■□□□ 1.26
PTCH1-210ENST00000468211 GNG11P61952 73 aa22.92■■□□□ 1.26
PTCH1-210ENST00000468211 ADORA2A-AS1P86434 159 aa22.92■■□□□ 1.26
PTCH1-210ENST00000468211 ALDH6A1Q02252 535 aaKnown RBP22.92■■□□□ 1.26
PTCH1-210ENST00000468211 RBPJQ06330 500 aa22.92■■□□□ 1.26
PTCH1-210ENST00000468211 ZNF800Q2TB10 664 aaPredicted RBP eCLIP22.92■■□□□ 1.26
PTCH1-210ENST00000468211 RNFT1Q5M7Z0 435 aa22.92■■□□□ 1.26
PTCH1-210ENST00000468211 SLC25A25Q6KCM7 469 aa22.92■■□□□ 1.26
PTCH1-210ENST00000468211 SLCO4C1Q6ZQN7 724 aa22.92■■□□□ 1.26
PTCH1-210ENST00000468211 SIAH3Q8IW03 269 aa22.92■■□□□ 1.26
PTCH1-210ENST00000468211 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP22.92■■□□□ 1.26
PTCH1-210ENST00000468211 TMEM178AQ8NBL3 297 aa22.92■■□□□ 1.26
PTCH1-210ENST00000468211 RHBDF1Q96CC6 855 aa22.92■■□□□ 1.26
PTCH1-210ENST00000468211 RUNDC3BQ96NL0 473 aa22.92■■□□□ 1.26
PTCH1-210ENST00000468211 PRDM9Q9NQV7 894 aa22.92■■□□□ 1.26
PTCH1-210ENST00000468211 CTNNAL1Q9UBT7 734 aa22.92■■□□□ 1.26
PTCH1-210ENST00000468211 ZNF835Q9Y2P0 537 aa22.92■■□□□ 1.26
PTCH1-210ENST00000468211 SNX24Q9Y343 169 aa22.92■■□□□ 1.26
PTCH1-210ENST00000468211 A0A0G2JN53 185 aa22.91■■□□□ 1.26
PTCH1-210ENST00000468211 NPIPA5E9PKD4 350 aa22.91■■□□□ 1.26
PTCH1-210ENST00000468211 WDR47O94967 919 aa22.91■■□□□ 1.26
PTCH1-210ENST00000468211 TNFRSF8P28908 595 aa22.91■■□□□ 1.26
PTCH1-210ENST00000468211 SLC6A12P48065 614 aa22.91■■□□□ 1.26
PTCH1-210ENST00000468211 MLF1P58340 268 aa22.91■■□□□ 1.26
PTCH1-210ENST00000468211 CAPN12Q6ZSI9 719 aa22.91■■□□□ 1.26
PTCH1-210ENST00000468211 SPATA6LQ8N4H0 392 aa22.91■■□□□ 1.26
PTCH1-210ENST00000468211 THAP3Q8WTV1 239 aaPredicted RBP22.91■■□□□ 1.26
PTCH1-210ENST00000468211 VPS39Q96JC1 886 aa22.91■■□□□ 1.26
PTCH1-210ENST00000468211 RHOJQ9H4E5 214 aa22.91■■□□□ 1.26
PTCH1-210ENST00000468211 CAB39LQ9H9S4 337 aa22.91■■□□□ 1.26
PTCH1-210ENST00000468211 CLK4Q9HAZ1 481 aaKnown RBP22.91■■□□□ 1.26
PTCH1-210ENST00000468211 NPIPA1Q9UND3 350 aa22.91■■□□□ 1.26
PTCH1-210ENST00000468211 SAR1BQ9Y6B6 198 aa22.91■■□□□ 1.26
PTCH1-210ENST00000468211 CACNA1CQ13936 2221 aa22.91■■□□□ 1.26
PTCH1-210ENST00000468211 URADA6NGE7 173 aa22.9■■□□□ 1.26
PTCH1-210ENST00000468211 EFCAB8A8MWE9 144 aa22.9■■□□□ 1.26
PTCH1-210ENST00000468211 WISP3O95389 354 aaPredicted RBP22.9■■□□□ 1.26
PTCH1-210ENST00000468211 C1GALT1C1LP0DN25 315 aa22.9■■□□□ 1.26
PTCH1-210ENST00000468211 HNRNPH1P31943 449 aaKnown RBP22.9■■□□□ 1.26
PTCH1-210ENST00000468211 BTN3A2P78410 334 aa22.9■■□□□ 1.26
PTCH1-210ENST00000468211 RUNX2Q13950 521 aa22.9■■□□□ 1.26
PTCH1-210ENST00000468211 MAPKAPK3Q16644 382 aa22.9■■□□□ 1.26
PTCH1-210ENST00000468211 KLHDC8AQ8IYD2 350 aa22.9■■□□□ 1.26
PTCH1-210ENST00000468211 ZBED8Q8IZ13 594 aa22.9■■□□□ 1.26
PTCH1-210ENST00000468211 ZNF808Q8N4W9 903 aaPredicted RBP22.9■■□□□ 1.26
PTCH1-210ENST00000468211 GPAMQ9HCL2 828 aa22.9■■□□□ 1.26
PTCH1-210ENST00000468211 MTO1Q9Y2Z2 717 aaKnown RBP22.9■■□□□ 1.26
PTCH1-210ENST00000468211 KLF2Q9Y5W3 355 aaPredicted RBP22.9■■□□□ 1.26
PTCH1-210ENST00000468211 DCHS2Q6V1P9 2916 aa22.89■■□□□ 1.26
PTCH1-210ENST00000468211 PDZD2O15018 2839 aa22.89■■□□□ 1.26
PTCH1-210ENST00000468211 NCF1BA6NI72 391 aaPredicted RBP22.89■■□□□ 1.25
PTCH1-210ENST00000468211 NCF1CA8MVU1 366 aaPredicted RBP22.89■■□□□ 1.25
PTCH1-210ENST00000468211 CXorf49A8MYA2 514 aaPredicted RBP22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms