RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 ACSL6Q9UKU0 697 aa14.45□□□□□ -0.1
SNIP1-202ENST00000468040 MRPS2Q9Y399 296 aaKnown RBP14.45□□□□□ -0.1
SNIP1-202ENST00000468040 H0YIG0 161 aa14.44□□□□□ -0.1
SNIP1-202ENST00000468040 STMND1H3BQB6 276 aa14.44□□□□□ -0.1
SNIP1-202ENST00000468040 MEN1O00255 615 aa14.44□□□□□ -0.1
SNIP1-202ENST00000468040 PIP5K1BO14986 540 aa14.44□□□□□ -0.1
SNIP1-202ENST00000468040 HDAC3O15379 428 aa14.44□□□□□ -0.1
SNIP1-202ENST00000468040 GALR3O60755 368 aaPredicted RBP14.44□□□□□ -0.1
SNIP1-202ENST00000468040 SKAP2O75563 359 aaPredicted RBP14.44□□□□□ -0.1
SNIP1-202ENST00000468040 RSL1D1O76021 490 aaKnown RBP14.44□□□□□ -0.1
SNIP1-202ENST00000468040 MED26O95402 600 aa14.44□□□□□ -0.1
SNIP1-202ENST00000468040 NSA2O95478 260 aaKnown RBP14.44□□□□□ -0.1
SNIP1-202ENST00000468040 ETHE1O95571 254 aa14.44□□□□□ -0.1
SNIP1-202ENST00000468040 DLGAP3O95886 979 aa14.44□□□□□ -0.1
SNIP1-202ENST00000468040 LINC00032P0C843 101 aa14.44□□□□□ -0.1
SNIP1-202ENST00000468040 SMIM10L1P0DMW3 83 aa14.44□□□□□ -0.1
SNIP1-202ENST00000468040 PIM1P11309 404 aaPredicted RBP14.44□□□□□ -0.1
SNIP1-202ENST00000468040 AGXTP21549 392 aa14.44□□□□□ -0.1
SNIP1-202ENST00000468040 RORAP35398 523 aa14.44□□□□□ -0.1
SNIP1-202ENST00000468040 RAB8AP61006 207 aa14.44□□□□□ -0.1
SNIP1-202ENST00000468040 ABHD18Q0P651 414 aa14.44□□□□□ -0.1
SNIP1-202ENST00000468040 PDCD2Q16342 344 aaPredicted RBP14.44□□□□□ -0.1
SNIP1-202ENST00000468040 AP5B1Q2VPB7 878 aa14.44□□□□□ -0.1
SNIP1-202ENST00000468040 DEFB134Q4QY38 66 aa14.44□□□□□ -0.1
SNIP1-202ENST00000468040 FAM219BQ5XKK7 198 aa14.44□□□□□ -0.1
SNIP1-202ENST00000468040 ABHD17CQ6PCB6 329 aa14.44□□□□□ -0.1
SNIP1-202ENST00000468040 SCIMPQ6UWF3 145 aa14.44□□□□□ -0.1
SNIP1-202ENST00000468040 FAM47EQ6ZV65 393 aa14.44□□□□□ -0.1
SNIP1-202ENST00000468040 WDR75Q8IWA0 830 aaKnown RBP14.44□□□□□ -0.1
SNIP1-202ENST00000468040 DSELQ8IZU8 1212 aa14.44□□□□□ -0.1
SNIP1-202ENST00000468040 SLC38A9Q8NBW4 561 aa14.44□□□□□ -0.1
SNIP1-202ENST00000468040 C19orf60Q96EN9 201 aa14.44□□□□□ -0.1
SNIP1-202ENST00000468040 SMIM10Q96HG1 83 aa14.44□□□□□ -0.1
SNIP1-202ENST00000468040 METTL2AQ96IZ6 378 aaKnown RBP14.44□□□□□ -0.1
SNIP1-202ENST00000468040 ZNF578Q96N58 590 aaPredicted RBP14.44□□□□□ -0.1
SNIP1-202ENST00000468040 GBP5Q96PP8 586 aa14.44□□□□□ -0.1
SNIP1-202ENST00000468040 AICDAQ9GZX7 198 aa14.44□□□□□ -0.1
SNIP1-202ENST00000468040 CLK4Q9HAZ1 481 aaKnown RBP14.44□□□□□ -0.1
SNIP1-202ENST00000468040 RIC8BQ9NVN3 520 aa14.44□□□□□ -0.1
SNIP1-202ENST00000468040 MARCOQ9UEW3 520 aaPredicted RBP14.44□□□□□ -0.1
SNIP1-202ENST00000468040 ANGPTL2Q9UKU9 493 aa14.44□□□□□ -0.1
SNIP1-202ENST00000468040 A0A0A6YYC8 382 aaPredicted RBP14.43□□□□□ -0.1
SNIP1-202ENST00000468040 TRPC5OSA6NMA1 111 aa14.43□□□□□ -0.1
SNIP1-202ENST00000468040 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.43□□□□□ -0.1
SNIP1-202ENST00000468040 NPIPB8E9PQR5 432 aa14.43□□□□□ -0.1
SNIP1-202ENST00000468040 I3L1I5 382 aaPredicted RBP14.43□□□□□ -0.1
SNIP1-202ENST00000468040 SAP18O00422 153 aaKnown RBP14.43□□□□□ -0.1
SNIP1-202ENST00000468040 PLPP1O14494 284 aa14.43□□□□□ -0.1
SNIP1-202ENST00000468040 FOXS1O43638 330 aa14.43□□□□□ -0.1
SNIP1-202ENST00000468040 EDF1O60869 148 aaKnown RBP14.43□□□□□ -0.1
SNIP1-202ENST00000468040 SH3BGRLO75368 114 aa14.43□□□□□ -0.1
SNIP1-202ENST00000468040 KLHL18O94889 574 aa14.43□□□□□ -0.1
SNIP1-202ENST00000468040 CCNYL3P0C7X3 344 aa14.43□□□□□ -0.1
SNIP1-202ENST00000468040 KITP10721 976 aa14.43□□□□□ -0.1
SNIP1-202ENST00000468040 IL1RNP18510 177 aa14.43□□□□□ -0.1
SNIP1-202ENST00000468040 PRPH2P23942 346 aa14.43□□□□□ -0.1
SNIP1-202ENST00000468040 SSR2P43308 183 aa14.43□□□□□ -0.1
SNIP1-202ENST00000468040 MTTPP55157 894 aa14.43□□□□□ -0.1
SNIP1-202ENST00000468040 BTN3A2P78410 334 aa14.43□□□□□ -0.1
SNIP1-202ENST00000468040 DCDP81605 110 aaKnown RBP14.43□□□□□ -0.1
SNIP1-202ENST00000468040 HMGCS1Q01581 520 aa14.43□□□□□ -0.1
SNIP1-202ENST00000468040 BTKQ06187 659 aa14.43□□□□□ -0.1
SNIP1-202ENST00000468040 SPIN4Q56A73 249 aa14.43□□□□□ -0.1
SNIP1-202ENST00000468040 XKR7Q5GH72 579 aa14.43□□□□□ -0.1
SNIP1-202ENST00000468040 SPDYAQ5MJ70 313 aa14.43□□□□□ -0.1
SNIP1-202ENST00000468040 C1orf189Q5VU69 101 aa14.43□□□□□ -0.1
SNIP1-202ENST00000468040 OR4C11Q6IEV9 310 aa14.43□□□□□ -0.1
SNIP1-202ENST00000468040 C6orf15Q6UXA7 325 aaPredicted RBP14.43□□□□□ -0.1
SNIP1-202ENST00000468040 PAGE2Q7Z2X7 111 aa14.43□□□□□ -0.1
SNIP1-202ENST00000468040 NUDT13Q86X67 352 aa14.43□□□□□ -0.1
SNIP1-202ENST00000468040 ESX1Q8N693 406 aa14.43□□□□□ -0.1
SNIP1-202ENST00000468040 GALNT6Q8NCL4 622 aa14.43□□□□□ -0.1
SNIP1-202ENST00000468040 OR9A4Q8NGU2 314 aa14.43□□□□□ -0.1
SNIP1-202ENST00000468040 MMABQ96EY8 250 aaPredicted RBP14.43□□□□□ -0.1
SNIP1-202ENST00000468040 QRFPRQ96P65 431 aa14.43□□□□□ -0.1
SNIP1-202ENST00000468040 SERINC2Q96SA4 455 aa14.43□□□□□ -0.1
SNIP1-202ENST00000468040 MRPL1Q9BYD6 325 aaKnown RBP14.43□□□□□ -0.1
SNIP1-202ENST00000468040 SPRY4Q9C004 299 aa14.43□□□□□ -0.1
SNIP1-202ENST00000468040 ZNF304Q9HCX3 659 aa14.43□□□□□ -0.1
SNIP1-202ENST00000468040 PRDM7Q9NQW5 492 aa14.43□□□□□ -0.1
SNIP1-202ENST00000468040 ADAM29Q9UKF5 820 aa14.43□□□□□ -0.1
SNIP1-202ENST00000468040 NAALAD2Q9Y3Q0 740 aa14.43□□□□□ -0.1
SNIP1-202ENST00000468040 CCL27Q9Y4X3 112 aa14.43□□□□□ -0.1
SNIP1-202ENST00000468040 PTGDR2Q9Y5Y4 395 aa14.43□□□□□ -0.1
SNIP1-202ENST00000468040 POLR3GO15318 223 aaPredicted RBP14.42□□□□□ -0.1
SNIP1-202ENST00000468040 B3GALT2O43825 422 aa14.42□□□□□ -0.1
SNIP1-202ENST00000468040 VPS4BO75351 444 aa14.42□□□□□ -0.1
SNIP1-202ENST00000468040 SCELO95171 688 aa14.42□□□□□ -0.1
SNIP1-202ENST00000468040 ONECUT2O95948 504 aa14.42□□□□□ -0.1
SNIP1-202ENST00000468040 VIMP08670 466 aaKnown RBP14.42□□□□□ -0.1
SNIP1-202ENST00000468040 HIST1H1TP22492 207 aaPredicted RBP14.42□□□□□ -0.1
SNIP1-202ENST00000468040 ACSM2AQ08AH3 577 aa14.42□□□□□ -0.1
SNIP1-202ENST00000468040 TBL3Q12788 808 aaKnown RBP14.42□□□□□ -0.1
SNIP1-202ENST00000468040 DSG2Q14126 1118 aa14.42□□□□□ -0.1
SNIP1-202ENST00000468040 NR6A1Q15406 480 aa14.42□□□□□ -0.1
SNIP1-202ENST00000468040 TBC1D25Q3MII6 688 aa14.42□□□□□ -0.1
SNIP1-202ENST00000468040 NKAIN1Q4KMZ8 207 aa14.42□□□□□ -0.1
SNIP1-202ENST00000468040 ZNF385CQ66K41 422 aaPredicted RBP14.42□□□□□ -0.1
SNIP1-202ENST00000468040 ACSM2BQ68CK6 577 aa14.42□□□□□ -0.1
SNIP1-202ENST00000468040 PRSS41Q7RTY9 318 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms