RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 MBTPS1Q14703 1052 aa13.28□□□□□ -0.28
BRAT1-203ENST00000467558 TMEM35AQ53FP2 167 aa13.28□□□□□ -0.28
BRAT1-203ENST00000467558 MSANTD1Q6ZTZ1 278 aa13.28□□□□□ -0.28
BRAT1-203ENST00000467558 OR10H5Q8NGA6 315 aa13.28□□□□□ -0.28
BRAT1-203ENST00000467558 DTD2Q96FN9 168 aa13.28□□□□□ -0.28
BRAT1-203ENST00000467558 F2RL3Q96RI0 385 aa13.28□□□□□ -0.28
BRAT1-203ENST00000467558 Q9N2J8 555 aa13.28□□□□□ -0.28
BRAT1-203ENST00000467558 DUX4Q9UBX2 424 aa13.28□□□□□ -0.28
BRAT1-203ENST00000467558 MAN2B2Q9Y2E5 1009 aa13.28□□□□□ -0.28
BRAT1-203ENST00000467558 NME7Q9Y5B8 376 aa13.28□□□□□ -0.28
BRAT1-203ENST00000467558 PAPPA2Q9BXP8 1791 aa13.28□□□□□ -0.28
BRAT1-203ENST00000467558 CPED1A4D0V7 1026 aa13.27□□□□□ -0.28
BRAT1-203ENST00000467558 C8BP07358 591 aa13.27□□□□□ -0.28
BRAT1-203ENST00000467558 ST3GAL3Q11203 375 aa13.27□□□□□ -0.28
BRAT1-203ENST00000467558 ATP6AP1Q15904 470 aa13.27□□□□□ -0.28
BRAT1-203ENST00000467558 ZNF423Q2M1K9 1284 aa13.27□□□□□ -0.28
BRAT1-203ENST00000467558 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.27□□□□□ -0.28
BRAT1-203ENST00000467558 GRHL2Q6ISB3 625 aa13.27□□□□□ -0.28
BRAT1-203ENST00000467558 NIPAL1Q6NVV3 410 aa13.27□□□□□ -0.28
BRAT1-203ENST00000467558 CLEC14AQ86T13 490 aa13.27□□□□□ -0.28
BRAT1-203ENST00000467558 ASPGQ86U10 573 aa13.27□□□□□ -0.28
BRAT1-203ENST00000467558 ZNF784Q8NCA9 323 aaPredicted RBP13.27□□□□□ -0.28
BRAT1-203ENST00000467558 NCSTNQ92542 709 aa13.27□□□□□ -0.28
BRAT1-203ENST00000467558 CHCHD6Q9BRQ6 235 aa13.27□□□□□ -0.28
BRAT1-203ENST00000467558 MKKSQ9NPJ1 570 aaPredicted RBP13.27□□□□□ -0.28
BRAT1-203ENST00000467558 SOBPA7XYQ1 873 aa13.27□□□□□ -0.28
BRAT1-203ENST00000467558 ZNF99A8MXY4 864 aaPredicted RBP13.27□□□□□ -0.28
BRAT1-203ENST00000467558 HAT1O14929 419 aa13.27□□□□□ -0.28
BRAT1-203ENST00000467558 MASP1P48740 699 aa13.27□□□□□ -0.28
BRAT1-203ENST00000467558 SPRED3Q2MJR0 410 aa13.27□□□□□ -0.28
BRAT1-203ENST00000467558 USP30Q70CQ3 517 aa13.27□□□□□ -0.28
BRAT1-203ENST00000467558 RAB8BQ92930 207 aa13.27□□□□□ -0.28
BRAT1-203ENST00000467558 FOXJ1Q92949 421 aa13.27□□□□□ -0.28
BRAT1-203ENST00000467558 MAPKAP1Q9BPZ7 522 aa13.27□□□□□ -0.28
BRAT1-203ENST00000467558 SPATA9Q9BWV2 254 aa13.27□□□□□ -0.28
BRAT1-203ENST00000467558 GPR174Q9BXC1 333 aa13.27□□□□□ -0.28
BRAT1-203ENST00000467558 ATXN10Q9UBB4 475 aa13.27□□□□□ -0.28
BRAT1-203ENST00000467558 WDR45Q9Y484 360 aa13.27□□□□□ -0.28
BRAT1-203ENST00000467558 NDUFAF6Q330K2 333 aa13.27□□□□□ -0.29
BRAT1-203ENST00000467558 KCTD21Q4G0X4 260 aa13.27□□□□□ -0.29
BRAT1-203ENST00000467558 NRROSQ86YC3 692 aa13.27□□□□□ -0.29
BRAT1-203ENST00000467558 C9orf43Q8TAL5 461 aaPredicted RBP13.27□□□□□ -0.29
BRAT1-203ENST00000467558 STON2Q8WXE9 905 aa13.27□□□□□ -0.29
BRAT1-203ENST00000467558 IFT27Q9BW83 186 aa13.27□□□□□ -0.29
BRAT1-203ENST00000467558 IKZF2Q9UKS7 526 aa13.27□□□□□ -0.29
BRAT1-203ENST00000467558 GPR39O43194 453 aa13.27□□□□□ -0.29
BRAT1-203ENST00000467558 IGLV3-25P01717 112 aa13.27□□□□□ -0.29
BRAT1-203ENST00000467558 CAPN3P20807 821 aa13.27□□□□□ -0.29
BRAT1-203ENST00000467558 DRD1P21728 446 aa13.27□□□□□ -0.29
BRAT1-203ENST00000467558 FMO3P31513 532 aa13.27□□□□□ -0.29
BRAT1-203ENST00000467558 FOXA1P55317 472 aa13.27□□□□□ -0.29
BRAT1-203ENST00000467558 PCDH1Q08174 1060 aa13.27□□□□□ -0.29
BRAT1-203ENST00000467558 IL18R1Q13478 541 aa13.27□□□□□ -0.29
BRAT1-203ENST00000467558 RAPSNQ13702 412 aa13.27□□□□□ -0.29
BRAT1-203ENST00000467558 FAM214AQ32MH5 1076 aa13.27□□□□□ -0.29
BRAT1-203ENST00000467558 IQCHQ86VS3 1027 aa13.27□□□□□ -0.29
BRAT1-203ENST00000467558 SNX33Q8WV41 574 aa13.27□□□□□ -0.29
BRAT1-203ENST00000467558 ALPK1Q96QP1 1244 aa13.27□□□□□ -0.29
BRAT1-203ENST00000467558 BHLHE41Q9C0J9 482 aaPredicted RBP13.27□□□□□ -0.29
BRAT1-203ENST00000467558 HCN4Q9Y3Q4 1203 aa13.27□□□□□ -0.29
BRAT1-203ENST00000467558 E7EQ34 232 aa13.26□□□□□ -0.29
BRAT1-203ENST00000467558 HCN1O60741 890 aa13.26□□□□□ -0.29
BRAT1-203ENST00000467558 OR5F1O95221 314 aa13.26□□□□□ -0.29
BRAT1-203ENST00000467558 C4BPBP20851 252 aa13.26□□□□□ -0.29
BRAT1-203ENST00000467558 CCR7P32248 378 aa13.26□□□□□ -0.29
BRAT1-203ENST00000467558 CLCN7P51798 805 aa13.26□□□□□ -0.29
BRAT1-203ENST00000467558 PON2Q15165 354 aa13.26□□□□□ -0.29
BRAT1-203ENST00000467558 NPTX1Q15818 432 aa13.26□□□□□ -0.29
BRAT1-203ENST00000467558 OTUD1Q5VV17 481 aaPredicted RBP13.26□□□□□ -0.29
BRAT1-203ENST00000467558 SMARCD3Q6STE5 483 aa13.26□□□□□ -0.29
BRAT1-203ENST00000467558 CCDC116Q8IYX3 515 aa13.26□□□□□ -0.29
BRAT1-203ENST00000467558 ZNF527Q8NB42 609 aa13.26□□□□□ -0.29
BRAT1-203ENST00000467558 OR7G3Q8NG95 312 aa13.26□□□□□ -0.29
BRAT1-203ENST00000467558 NTMT1Q9BV86 223 aa13.26□□□□□ -0.29
BRAT1-203ENST00000467558 CAPN14A8MX76 684 aa13.26□□□□□ -0.29
BRAT1-203ENST00000467558 B4GALT2O60909 372 aa13.26□□□□□ -0.29
BRAT1-203ENST00000467558 PRKACGP22612 351 aa13.26□□□□□ -0.29
BRAT1-203ENST00000467558 NR4A1P22736 598 aa13.26□□□□□ -0.29
BRAT1-203ENST00000467558 OR4D2P58180 307 aa13.26□□□□□ -0.29
BRAT1-203ENST00000467558 PTGES3Q15185 160 aaKnown RBP13.26□□□□□ -0.29
BRAT1-203ENST00000467558 TRIM71Q2Q1W2 868 aaKnown RBP13.26□□□□□ -0.29
BRAT1-203ENST00000467558 CXorf57Q6NSI4 855 aaKnown RBP13.26□□□□□ -0.29
BRAT1-203ENST00000467558 RSPO2Q6UXX9 243 aaPredicted RBP13.26□□□□□ -0.29
BRAT1-203ENST00000467558 LARP4Q71RC2 724 aaKnown RBP eCLIP13.26□□□□□ -0.29
BRAT1-203ENST00000467558 SPPL3Q8TCT6 385 aa13.26□□□□□ -0.29
BRAT1-203ENST00000467558 NR4A3Q92570 626 aa13.26□□□□□ -0.29
BRAT1-203ENST00000467558 TAPBPLQ9BX59 468 aa13.26□□□□□ -0.29
BRAT1-203ENST00000467558 UCK2Q9BZX2 261 aa13.26□□□□□ -0.29
BRAT1-203ENST00000467558 PNO1Q9NRX1 252 aaKnown RBP13.26□□□□□ -0.29
BRAT1-203ENST00000467558 DKK3Q9UBP4 350 aa13.26□□□□□ -0.29
BRAT1-203ENST00000467558 DRD2P14416 443 aa13.26□□□□□ -0.29
BRAT1-203ENST00000467558 OXTRP30559 389 aa13.26□□□□□ -0.29
BRAT1-203ENST00000467558 MVKQ03426 396 aa13.26□□□□□ -0.29
BRAT1-203ENST00000467558 AAK1Q2M2I8 961 aa13.26□□□□□ -0.29
BRAT1-203ENST00000467558 LCN8Q6JVE9 175 aa13.26□□□□□ -0.29
BRAT1-203ENST00000467558 ARMCX6Q7L4S7 300 aa13.26□□□□□ -0.29
BRAT1-203ENST00000467558 IZUMO1Q8IYV9 350 aa13.26□□□□□ -0.29
BRAT1-203ENST00000467558 OR2A12Q8NGT7 310 aa13.26□□□□□ -0.29
BRAT1-203ENST00000467558 ART5Q96L15 291 aa13.26□□□□□ -0.29
BRAT1-203ENST00000467558 ZNF354BQ96LW1 612 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms