RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 KRT6BP04259 564 aa17.81■□□□□ 0.44
CAPN3-209ENST00000466222 ZFP36L2P47974 494 aaKnown RBP17.81■□□□□ 0.44
CAPN3-209ENST00000466222 KRT6CP48668 564 aa17.81■□□□□ 0.44
CAPN3-209ENST00000466222 DIO3P55073 304 aa17.81■□□□□ 0.44
CAPN3-209ENST00000466222 MERTKQ12866 999 aa17.81■□□□□ 0.44
CAPN3-209ENST00000466222 COL9A2Q14055 689 aaPredicted RBP17.81■□□□□ 0.44
CAPN3-209ENST00000466222 RFTN2Q52LD8 501 aaPredicted RBP17.81■□□□□ 0.44
CAPN3-209ENST00000466222 TRIM61Q5EBN2 209 aa17.81■□□□□ 0.44
CAPN3-209ENST00000466222 TCEAL6Q6IPX3 200 aa17.81■□□□□ 0.44
CAPN3-209ENST00000466222 CBR4Q8N4T8 237 aa17.81■□□□□ 0.44
CAPN3-209ENST00000466222 OR2L3Q8NG85 312 aa17.81■□□□□ 0.44
CAPN3-209ENST00000466222 FLVCR1-AS1Q8TAF5 88 aa17.81■□□□□ 0.44
CAPN3-209ENST00000466222 ADAMTS16Q8TE57 1224 aa17.81■□□□□ 0.44
CAPN3-209ENST00000466222 RSC1A1Q92681 617 aa17.81■□□□□ 0.44
CAPN3-209ENST00000466222 TCEAL3Q969E4 200 aa17.81■□□□□ 0.44
CAPN3-209ENST00000466222 GFM2Q969S9 779 aaKnown RBP17.81■□□□□ 0.44
CAPN3-209ENST00000466222 GMPR2Q9P2T1 348 aaKnown RBP17.81■□□□□ 0.44
CAPN3-209ENST00000466222 EGFL7Q9UHF1 273 aa17.81■□□□□ 0.44
CAPN3-209ENST00000466222 ANAPC2Q9UJX6 822 aa17.81■□□□□ 0.44
CAPN3-209ENST00000466222 SNX6Q9UNH7 406 aa17.81■□□□□ 0.44
CAPN3-209ENST00000466222 TCRBV5S2A0A599 114 aa17.8■□□□□ 0.44
CAPN3-209ENST00000466222 GSAPA4D1B5 854 aa17.8■□□□□ 0.44
CAPN3-209ENST00000466222 TRIM64A6NGJ6 449 aa17.8■□□□□ 0.44
CAPN3-209ENST00000466222 MAGEB17A8MXT2 336 aa17.8■□□□□ 0.44
CAPN3-209ENST00000466222 H0YIV9 168 aa17.8■□□□□ 0.44
CAPN3-209ENST00000466222 ZNF701M0R085 212 aaPredicted RBP17.8■□□□□ 0.44
CAPN3-209ENST00000466222 PRAMEF10O60809 474 aa17.8■□□□□ 0.44
CAPN3-209ENST00000466222 TRMUO75648 421 aaKnown RBP17.8■□□□□ 0.44
CAPN3-209ENST00000466222 HNF4AP41235 474 aa17.8■□□□□ 0.44
CAPN3-209ENST00000466222 ARRB1P49407 418 aaPredicted RBP17.8■□□□□ 0.44
CAPN3-209ENST00000466222 RPS6KA3P51812 740 aa17.8■□□□□ 0.44
CAPN3-209ENST00000466222 LIPEQ05469 1076 aa17.8■□□□□ 0.44
CAPN3-209ENST00000466222 NR6A1Q15406 480 aa17.8■□□□□ 0.44
CAPN3-209ENST00000466222 SLC36A3Q495N2 470 aa17.8■□□□□ 0.44
CAPN3-209ENST00000466222 C6orf136Q5SQH8 315 aa17.8■□□□□ 0.44
CAPN3-209ENST00000466222 ISLR2Q6UXK2 745 aa17.8■□□□□ 0.44
CAPN3-209ENST00000466222 TRIM46Q7Z4K8 759 aa17.8■□□□□ 0.44
CAPN3-209ENST00000466222 ADCK2Q7Z695 626 aa17.8■□□□□ 0.44
CAPN3-209ENST00000466222 EPHX4Q8IUS5 362 aa17.8■□□□□ 0.44
CAPN3-209ENST00000466222 ERI1Q8IV48 349 aaKnown RBP17.8■□□□□ 0.44
CAPN3-209ENST00000466222 DPP10Q8N608 796 aa17.8■□□□□ 0.44
CAPN3-209ENST00000466222 FAM47BQ8NA70 645 aa17.8■□□□□ 0.44
CAPN3-209ENST00000466222 HUS1BQ8NHY5 278 aa17.8■□□□□ 0.44
CAPN3-209ENST00000466222 WDR34Q96EX3 536 aa17.8■□□□□ 0.44
CAPN3-209ENST00000466222 COL25A1Q9BXS0 654 aaPredicted RBP17.8■□□□□ 0.44
CAPN3-209ENST00000466222 GAREM1Q9H706 876 aa17.8■□□□□ 0.44
CAPN3-209ENST00000466222 SYNPO2LQ9H987 977 aa17.8■□□□□ 0.44
CAPN3-209ENST00000466222 CAPN10Q9HC96 672 aa17.8■□□□□ 0.44
CAPN3-209ENST00000466222 HRASLS2Q9NWW9 162 aa17.8■□□□□ 0.44
CAPN3-209ENST00000466222 RNF103-CHMP3A0A140T963 221 aa17.8■□□□□ 0.44
CAPN3-209ENST00000466222 LCMT2O60294 686 aaKnown RBP17.8■□□□□ 0.44
CAPN3-209ENST00000466222 RXRGP48443 463 aa17.8■□□□□ 0.44
CAPN3-209ENST00000466222 ESRRGP62508 458 aa17.8■□□□□ 0.44
CAPN3-209ENST00000466222 EMX2Q04743 252 aa17.8■□□□□ 0.44
CAPN3-209ENST00000466222 CYP51A1Q16850 503 aa17.8■□□□□ 0.44
CAPN3-209ENST00000466222 DUOXA1Q1HG43 343 aa17.8■□□□□ 0.44
CAPN3-209ENST00000466222 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.8■□□□□ 0.44
CAPN3-209ENST00000466222 OGFOD3Q6PK18 319 aa17.8■□□□□ 0.44
CAPN3-209ENST00000466222 ANKRD53Q8N9V6 530 aa17.8■□□□□ 0.44
CAPN3-209ENST00000466222 GPR156Q8NFN8 814 aa17.8■□□□□ 0.44
CAPN3-209ENST00000466222 ABHD11Q8NFV4 315 aa17.8■□□□□ 0.44
CAPN3-209ENST00000466222 OR2A14Q96R47 310 aa17.8■□□□□ 0.44
CAPN3-209ENST00000466222 YTHDF1Q9BYJ9 559 aaKnown RBP17.8■□□□□ 0.44
CAPN3-209ENST00000466222 ARRDC1-AS1Q9H2J1 176 aa17.8■□□□□ 0.44
CAPN3-209ENST00000466222 PRM3Q9NNZ6 103 aa17.8■□□□□ 0.44
CAPN3-209ENST00000466222 MRPS30Q9NP92 439 aaKnown RBP17.8■□□□□ 0.44
CAPN3-209ENST00000466222 THADAQ6YHU6 1953 aa17.8■□□□□ 0.44
CAPN3-209ENST00000466222 A0A1B0GTQ1 180 aa17.79■□□□□ 0.44
CAPN3-209ENST00000466222 ASPDHA6ND91 283 aa17.79■□□□□ 0.44
CAPN3-209ENST00000466222 H3BSA7 217 aa17.79■□□□□ 0.44
CAPN3-209ENST00000466222 GALR2O43603 387 aaPredicted RBP17.79■□□□□ 0.44
CAPN3-209ENST00000466222 STATHP02808 62 aa17.79■□□□□ 0.44
CAPN3-209ENST00000466222 SLC2A4P14672 509 aa17.79■□□□□ 0.44
CAPN3-209ENST00000466222 EPHA8P29322 1005 aaPredicted RBP17.79■□□□□ 0.44
CAPN3-209ENST00000466222 LSSP48449 732 aa17.79■□□□□ 0.44
CAPN3-209ENST00000466222 CSNK1G2P78368 415 aa17.79■□□□□ 0.44
CAPN3-209ENST00000466222 AP5B1Q2VPB7 878 aa17.79■□□□□ 0.44
CAPN3-209ENST00000466222 ATP6AP1LQ52LC2 224 aa17.79■□□□□ 0.44
CAPN3-209ENST00000466222 MED27Q6P2C8 311 aa17.79■□□□□ 0.44
CAPN3-209ENST00000466222 TTC33Q6PID6 262 aaPredicted RBP17.79■□□□□ 0.44
CAPN3-209ENST00000466222 VN1R5Q7Z5H4 357 aa17.79■□□□□ 0.44
CAPN3-209ENST00000466222 C17orf82Q86X59 251 aaPredicted RBP17.79■□□□□ 0.44
CAPN3-209ENST00000466222 ZFAND4Q86XD8 727 aa17.79■□□□□ 0.44
CAPN3-209ENST00000466222 SLC35F3Q8IY50 421 aa17.79■□□□□ 0.44
CAPN3-209ENST00000466222 FNDC5Q8NAU1 212 aa17.79■□□□□ 0.44
CAPN3-209ENST00000466222 NUDT8Q8WV74 236 aa17.79■□□□□ 0.44
CAPN3-209ENST00000466222 FCRL4Q96PJ5 515 aa17.79■□□□□ 0.44
CAPN3-209ENST00000466222 DPH7Q9BTV6 452 aa17.79■□□□□ 0.44
CAPN3-209ENST00000466222 PCBD2Q9H0N5 130 aa17.79■□□□□ 0.44
CAPN3-209ENST00000466222 EHD1Q9H4M9 534 aa17.79■□□□□ 0.44
CAPN3-209ENST00000466222 ACTR10Q9NZ32 417 aa17.79■□□□□ 0.44
CAPN3-209ENST00000466222 MAGEL2Q9UJ55 1249 aa17.79■□□□□ 0.44
CAPN3-209ENST00000466222 C9JVG2 144 aa17.78■□□□□ 0.44
CAPN3-209ENST00000466222 DLGAP1O14490 977 aa17.78■□□□□ 0.44
CAPN3-209ENST00000466222 KDM1AO60341 852 aa17.78■□□□□ 0.44
CAPN3-209ENST00000466222 UGT2B7P16662 529 aa17.78■□□□□ 0.44
CAPN3-209ENST00000466222 SLC5A2P31639 672 aa17.78■□□□□ 0.44
CAPN3-209ENST00000466222 TTKP33981 857 aa17.78■□□□□ 0.44
CAPN3-209ENST00000466222 FASLGP48023 281 aa17.78■□□□□ 0.44
CAPN3-209ENST00000466222 CCR8P51685 355 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms