RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 KDM1AO60341 852 aa20.8■□□□□ 0.92
PDLIM2-216ENST00000464275 APBB3O95704 486 aa20.8■□□□□ 0.92
PDLIM2-216ENST00000464275 MT-ND1P03886 318 aa20.8■□□□□ 0.92
PDLIM2-216ENST00000464275 HNRNPA2B1P22626 353 aaKnown RBP20.8■□□□□ 0.92
PDLIM2-216ENST00000464275 NUP107P57740 925 aa20.8■□□□□ 0.92
PDLIM2-216ENST00000464275 TAS2R50P59544 299 aa20.8■□□□□ 0.92
PDLIM2-216ENST00000464275 PRDX1Q06830 199 aaKnown RBP20.8■□□□□ 0.92
PDLIM2-216ENST00000464275 ZNF420Q8TAQ5 688 aaPredicted RBP20.8■□□□□ 0.92
PDLIM2-216ENST00000464275 LZICQ8WZA0 190 aa20.8■□□□□ 0.92
PDLIM2-216ENST00000464275 FAM3CQ92520 227 aa20.8■□□□□ 0.92
PDLIM2-216ENST00000464275 PPCDCQ96CD2 204 aa20.8■□□□□ 0.92
PDLIM2-216ENST00000464275 VPS50Q96JG6 964 aa20.8■□□□□ 0.92
PDLIM2-216ENST00000464275 TTYH1Q9H313 450 aaPredicted RBP20.8■□□□□ 0.92
PDLIM2-216ENST00000464275 TPT1P8Q9HAU6 139 aa20.8■□□□□ 0.92
PDLIM2-216ENST00000464275 PRDM8Q9NQV8 689 aa20.8■□□□□ 0.92
PDLIM2-216ENST00000464275 AASDHPPTQ9NRN7 309 aa20.8■□□□□ 0.92
PDLIM2-216ENST00000464275 PRSS23O95084 383 aa20.79■□□□□ 0.92
PDLIM2-216ENST00000464275 GABRG2P18507 467 aa20.79■□□□□ 0.92
PDLIM2-216ENST00000464275 CCINQ13939 588 aa20.79■□□□□ 0.92
PDLIM2-216ENST00000464275 LRRC23Q53EV4 343 aaPredicted RBP20.79■□□□□ 0.92
PDLIM2-216ENST00000464275 ZCCHC8Q6NZY4 707 aaKnown RBP20.79■□□□□ 0.92
PDLIM2-216ENST00000464275 DHRS4L2Q6PKH6 230 aa20.79■□□□□ 0.92
PDLIM2-216ENST00000464275 USP51Q70EK9 711 aa20.79■□□□□ 0.92
PDLIM2-216ENST00000464275 ZZZ3Q8IYH5 903 aa20.79■□□□□ 0.92
PDLIM2-216ENST00000464275 PGBD3Q8N328 593 aa20.79■□□□□ 0.92
PDLIM2-216ENST00000464275 FAM86B1Q8N7N1 296 aa20.79■□□□□ 0.92
PDLIM2-216ENST00000464275 OR52E1Q8NGJ3 308 aa20.79■□□□□ 0.92
PDLIM2-216ENST00000464275 OR4A15Q8NGL6 344 aa20.79■□□□□ 0.92
PDLIM2-216ENST00000464275 GOT1L1Q8NHS2 421 aaPredicted RBP20.79■□□□□ 0.92
PDLIM2-216ENST00000464275 OR1E3Q8WZA6 343 aa20.79■□□□□ 0.92
PDLIM2-216ENST00000464275 XKR8Q9H6D3 395 aa20.79■□□□□ 0.92
PDLIM2-216ENST00000464275 MDC1Q14676 2089 aaKnown RBP20.79■□□□□ 0.92
PDLIM2-216ENST00000464275 C1orf226A1L170 272 aa20.79■□□□□ 0.92
PDLIM2-216ENST00000464275 OR52A4PA6NMU1 304 aa20.79■□□□□ 0.92
PDLIM2-216ENST00000464275 PRKD3O94806 890 aa20.79■□□□□ 0.92
PDLIM2-216ENST00000464275 CCNDBP1O95273 360 aa20.79■□□□□ 0.92
PDLIM2-216ENST00000464275 KCNK5O95279 499 aa20.79■□□□□ 0.92
PDLIM2-216ENST00000464275 TBX6O95947 436 aaPredicted RBP20.79■□□□□ 0.92
PDLIM2-216ENST00000464275 HPRP00739 348 aa20.79■□□□□ 0.92
PDLIM2-216ENST00000464275 SERPINA1P01009 418 aa20.79■□□□□ 0.92
PDLIM2-216ENST00000464275 EFNA1P20827 205 aaPredicted RBP20.79■□□□□ 0.92
PDLIM2-216ENST00000464275 CSNK1G2P78368 415 aa20.79■□□□□ 0.92
PDLIM2-216ENST00000464275 VMACQ2NL98 169 aa20.79■□□□□ 0.92
PDLIM2-216ENST00000464275 OR2A1Q8NGT9 310 aa20.79■□□□□ 0.92
PDLIM2-216ENST00000464275 CYGBQ8WWM9 190 aa20.79■□□□□ 0.92
PDLIM2-216ENST00000464275 CNDP2Q96KP4 475 aaKnown RBP20.79■□□□□ 0.92
PDLIM2-216ENST00000464275 BMFQ96LC9 184 aa20.79■□□□□ 0.92
PDLIM2-216ENST00000464275 ICKQ9UPZ9 632 aa20.79■□□□□ 0.92
PDLIM2-216ENST00000464275 WBP11Q9Y2W2 641 aaKnown RBP20.79■□□□□ 0.92
PDLIM2-216ENST00000464275 COLEC10Q9Y6Z7 277 aa20.79■□□□□ 0.92
PDLIM2-216ENST00000464275 FEZF1A0PJY2 475 aa20.78■□□□□ 0.92
PDLIM2-216ENST00000464275 PLPP1O14494 284 aa20.78■□□□□ 0.92
PDLIM2-216ENST00000464275 HTR1BP28222 390 aa20.78■□□□□ 0.92
PDLIM2-216ENST00000464275 TPP2P29144 1249 aaPredicted RBP20.78■□□□□ 0.92
PDLIM2-216ENST00000464275 CYP4F2P78329 520 aa20.78■□□□□ 0.92
PDLIM2-216ENST00000464275 MC1RQ01726 317 aa20.78■□□□□ 0.92
PDLIM2-216ENST00000464275 DCTN2Q13561 401 aaKnown RBP20.78■□□□□ 0.92
PDLIM2-216ENST00000464275 NKG7Q16617 165 aa20.78■□□□□ 0.92
PDLIM2-216ENST00000464275 CYBRD1Q53TN4 286 aa20.78■□□□□ 0.92
PDLIM2-216ENST00000464275 CCNYL2Q5T2Q4 361 aa20.78■□□□□ 0.92
PDLIM2-216ENST00000464275 PAGE2Q7Z2X7 111 aa20.78■□□□□ 0.92
PDLIM2-216ENST00000464275 EID3Q8N140 333 aa20.78■□□□□ 0.92
PDLIM2-216ENST00000464275 ZFP90Q8TF47 636 aa20.78■□□□□ 0.92
PDLIM2-216ENST00000464275 DDX18Q9NVP1 670 aaKnown RBP20.78■□□□□ 0.92
PDLIM2-216ENST00000464275 SPASTQ9UBP0 616 aa20.78■□□□□ 0.92
PDLIM2-216ENST00000464275 SHISA7A6NL88 538 aa20.77■□□□□ 0.92
PDLIM2-216ENST00000464275 MBTPS2O43462 519 aa20.77■□□□□ 0.92
PDLIM2-216ENST00000464275 GPR37L1O60883 481 aa20.77■□□□□ 0.92
PDLIM2-216ENST00000464275 GNAO1P09471 354 aa20.77■□□□□ 0.92
PDLIM2-216ENST00000464275 ADARB1P78563 741 aaKnown RBP20.77■□□□□ 0.92
PDLIM2-216ENST00000464275 EPS8Q12929 822 aa20.77■□□□□ 0.92
PDLIM2-216ENST00000464275 SMAD4Q13485 552 aaKnown RBP20.77■□□□□ 0.92
PDLIM2-216ENST00000464275 WASH2PQ6VEQ5 465 aa20.77■□□□□ 0.92
PDLIM2-216ENST00000464275 PDXPQ96GD0 296 aa20.77■□□□□ 0.92
PDLIM2-216ENST00000464275 QRFPRQ96P65 431 aa20.77■□□□□ 0.92
PDLIM2-216ENST00000464275 F2RL3Q96RI0 385 aa20.77■□□□□ 0.92
PDLIM2-216ENST00000464275 TUBA1CQ9BQE3 449 aa20.77■□□□□ 0.92
PDLIM2-216ENST00000464275 KIR3DX1Q9H7L2 352 aa20.77■□□□□ 0.92
PDLIM2-216ENST00000464275 NTN4Q9HB63 628 aa20.77■□□□□ 0.92
PDLIM2-216ENST00000464275 SCHIP1Q9P0W5 487 aaPredicted RBP20.77■□□□□ 0.92
PDLIM2-216ENST00000464275 DNAJB9Q9UBS3 223 aa20.77■□□□□ 0.92
PDLIM2-216ENST00000464275 CA5BQ9Y2D0 317 aa20.77■□□□□ 0.92
PDLIM2-216ENST00000464275 ZBTB32Q9Y2Y4 487 aaPredicted RBP20.77■□□□□ 0.92
PDLIM2-216ENST00000464275 SCAMP1O15126 338 aa20.77■□□□□ 0.92
PDLIM2-216ENST00000464275 OR1F1O43749 312 aa20.77■□□□□ 0.92
PDLIM2-216ENST00000464275 C1QCP02747 245 aa20.77■□□□□ 0.92
PDLIM2-216ENST00000464275 IL3P08700 152 aa20.77■□□□□ 0.92
PDLIM2-216ENST00000464275 PCSK6P29122 969 aa20.77■□□□□ 0.92
PDLIM2-216ENST00000464275 BSGP35613 385 aa20.77■□□□□ 0.92
PDLIM2-216ENST00000464275 ABATP80404 500 aa20.77■□□□□ 0.92
PDLIM2-216ENST00000464275 HPCAP84074 193 aa20.77■□□□□ 0.92
PDLIM2-216ENST00000464275 TTLQ8NG68 377 aa20.77■□□□□ 0.92
PDLIM2-216ENST00000464275 PYURFQ96I23 114 aa20.77■□□□□ 0.92
PDLIM2-216ENST00000464275 SORBS1Q9BX66 1292 aaKnown RBP20.77■□□□□ 0.92
PDLIM2-216ENST00000464275 ZNF717Q9BY31 904 aaPredicted RBP20.77■□□□□ 0.92
PDLIM2-216ENST00000464275 SAMD4AQ9UPU9 718 aaKnown RBP20.77■□□□□ 0.92
PDLIM2-216ENST00000464275 TRBC2A0A5B9 178 aa20.76■□□□□ 0.91
PDLIM2-216ENST00000464275 TNFRSF10CO14798 259 aa20.76■□□□□ 0.91
PDLIM2-216ENST00000464275 NARSO43776 548 aaKnown RBP20.76■□□□□ 0.91
PDLIM2-216ENST00000464275 PRICKLE3O43900 615 aaPredicted RBP20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms