RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 CLMPQ9H6B4 373 aa12.22□□□□□ -0.45
XRN1-203ENST00000463916 NT5DC2Q9H857 520 aa12.22□□□□□ -0.45
XRN1-203ENST00000463916 B3GNT3Q9Y2A9 372 aa12.22□□□□□ -0.45
XRN1-203ENST00000463916 FHP07954 510 aa12.22□□□□□ -0.45
XRN1-203ENST00000463916 MSH2P43246 934 aa12.22□□□□□ -0.45
XRN1-203ENST00000463916 BTG2P78543 158 aa12.22□□□□□ -0.45
XRN1-203ENST00000463916 E2F2Q14209 437 aa12.22□□□□□ -0.45
XRN1-203ENST00000463916 ABRAXAS2Q15018 415 aa12.22□□□□□ -0.45
XRN1-203ENST00000463916 LRRC70Q7Z2Q7 622 aa12.22□□□□□ -0.45
XRN1-203ENST00000463916 CPEB2Q7Z5Q1 589 aaKnown RBP12.22□□□□□ -0.45
XRN1-203ENST00000463916 CCDC91Q7Z6B0 441 aa12.22□□□□□ -0.45
XRN1-203ENST00000463916 ANKRD37Q7Z713 158 aa12.22□□□□□ -0.45
XRN1-203ENST00000463916 GSPT2Q8IYD1 628 aaKnown RBP12.22□□□□□ -0.45
XRN1-203ENST00000463916 KRT78Q8N1N4 520 aa12.22□□□□□ -0.45
XRN1-203ENST00000463916 SIRT6Q8N6T7 355 aa12.22□□□□□ -0.45
XRN1-203ENST00000463916 CPT1CQ8TCG5 803 aa12.22□□□□□ -0.45
XRN1-203ENST00000463916 UBTD2Q8WUN7 234 aa12.22□□□□□ -0.45
XRN1-203ENST00000463916 METTL21AQ8WXB1 218 aa12.22□□□□□ -0.45
XRN1-203ENST00000463916 CCT6BQ92526 530 aa12.22□□□□□ -0.45
XRN1-203ENST00000463916 C19orf60Q96EN9 201 aa12.22□□□□□ -0.45
XRN1-203ENST00000463916 OR1F2PQ96R84 312 aa12.22□□□□□ -0.45
XRN1-203ENST00000463916 TXLNGYQ9BZA5 131 aa12.22□□□□□ -0.45
XRN1-203ENST00000463916 SLAMF7Q9NQ25 335 aa12.22□□□□□ -0.45
XRN1-203ENST00000463916 PTGFRNQ9P2B2 879 aa12.22□□□□□ -0.45
XRN1-203ENST00000463916 A0A087WUV0 522 aaPredicted RBP12.21□□□□□ -0.45
XRN1-203ENST00000463916 K7EPI3 171 aa12.21□□□□□ -0.45
XRN1-203ENST00000463916 KLK8O60259 260 aa12.21□□□□□ -0.45
XRN1-203ENST00000463916 B4GALT2O60909 372 aa12.21□□□□□ -0.45
XRN1-203ENST00000463916 SERPINA7P05543 415 aa12.21□□□□□ -0.45
XRN1-203ENST00000463916 MYBL2P10244 700 aa12.21□□□□□ -0.45
XRN1-203ENST00000463916 ITGAMP11215 1152 aa12.21□□□□□ -0.45
XRN1-203ENST00000463916 CASP2P42575 452 aa12.21□□□□□ -0.45
XRN1-203ENST00000463916 BTN3A2P78410 334 aa12.21□□□□□ -0.45
XRN1-203ENST00000463916 IRF8Q02556 426 aa12.21□□□□□ -0.45
XRN1-203ENST00000463916 RUNX2Q13950 521 aa12.21□□□□□ -0.45
XRN1-203ENST00000463916 INPP5JQ15735 1006 aaPredicted RBP12.21□□□□□ -0.45
XRN1-203ENST00000463916 NSDHLQ15738 373 aa12.21□□□□□ -0.45
XRN1-203ENST00000463916 B3GNTL1Q67FW5 361 aaPredicted RBP12.21□□□□□ -0.45
XRN1-203ENST00000463916 Q6ZS92 163 aa12.21□□□□□ -0.45
XRN1-203ENST00000463916 CUZD1Q86UP6 607 aa12.21□□□□□ -0.45
XRN1-203ENST00000463916 ZADH2Q8N4Q0 377 aa12.21□□□□□ -0.45
XRN1-203ENST00000463916 PLPP5Q8NEB5 264 aa12.21□□□□□ -0.45
XRN1-203ENST00000463916 RHBGQ9H310 441 aa12.21□□□□□ -0.45
XRN1-203ENST00000463916 EPB41L4BQ9H329 900 aa12.21□□□□□ -0.45
XRN1-203ENST00000463916 RIC8BQ9NVN3 520 aa12.21□□□□□ -0.45
XRN1-203ENST00000463916 OPTCQ9UBM4 332 aa12.21□□□□□ -0.45
XRN1-203ENST00000463916 RP1L1Q8IWN7 2480 aaPredicted RBP12.21□□□□□ -0.45
XRN1-203ENST00000463916 SHANK1Q9Y566 2161 aa12.2□□□□□ -0.46
XRN1-203ENST00000463916 URADA6NGE7 173 aa12.2□□□□□ -0.46
XRN1-203ENST00000463916 ANKDD1BA6NHY2 528 aa12.2□□□□□ -0.46
XRN1-203ENST00000463916 SYCE1LA8MT33 242 aa12.2□□□□□ -0.46
XRN1-203ENST00000463916 TRIM49D1C9J1S8 452 aa12.2□□□□□ -0.46
XRN1-203ENST00000463916 PCDH17O14917 1159 aa12.2□□□□□ -0.46
XRN1-203ENST00000463916 RIPK2O43353 540 aa12.2□□□□□ -0.46
XRN1-203ENST00000463916 ERI3O43414 337 aaKnown RBP12.2□□□□□ -0.46
XRN1-203ENST00000463916 CLEC3AO75596 197 aa12.2□□□□□ -0.46
XRN1-203ENST00000463916 SIX3O95343 332 aaPredicted RBP12.2□□□□□ -0.46
XRN1-203ENST00000463916 PLA2G16P53816 162 aa12.2□□□□□ -0.46
XRN1-203ENST00000463916 STXBP1P61764 594 aaKnown RBP12.2□□□□□ -0.46
XRN1-203ENST00000463916 SETDB1Q15047 1291 aa12.2□□□□□ -0.46
XRN1-203ENST00000463916 TBCCQ15814 346 aa12.2□□□□□ -0.46
XRN1-203ENST00000463916 ADPRMQ3LIE5 342 aa12.2□□□□□ -0.46
XRN1-203ENST00000463916 TECRLQ5HYJ1 363 aa12.2□□□□□ -0.46
XRN1-203ENST00000463916 IRAK1BP1Q5VVH5 260 aa12.2□□□□□ -0.46
XRN1-203ENST00000463916 ISLR2Q6UXK2 745 aa12.2□□□□□ -0.46
XRN1-203ENST00000463916 CA13Q8N1Q1 262 aa12.2□□□□□ -0.46
XRN1-203ENST00000463916 RNF175Q8N4F7 328 aa12.2□□□□□ -0.46
XRN1-203ENST00000463916 TEX9Q8N6V9 391 aa12.2□□□□□ -0.46
XRN1-203ENST00000463916 CATSPER1Q8NEC5 780 aa12.2□□□□□ -0.46
XRN1-203ENST00000463916 TTLQ8NG68 377 aa12.2□□□□□ -0.46
XRN1-203ENST00000463916 F2RL3Q96RI0 385 aa12.2□□□□□ -0.46
XRN1-203ENST00000463916 EFCAB11Q9BUY7 163 aa12.2□□□□□ -0.46
XRN1-203ENST00000463916 PITHD1Q9GZP4 211 aaPredicted RBP12.2□□□□□ -0.46
XRN1-203ENST00000463916 REXO4Q9GZR2 422 aaKnown RBP12.2□□□□□ -0.46
XRN1-203ENST00000463916 L2HGDHQ9H9P8 463 aa12.2□□□□□ -0.46
XRN1-203ENST00000463916 ZNF180Q9UJW8 692 aa12.2□□□□□ -0.46
XRN1-203ENST00000463916 IKBKGQ9Y6K9 419 aa12.2□□□□□ -0.46
XRN1-203ENST00000463916 UTP20O75691 2785 aaKnown RBP12.2□□□□□ -0.46
XRN1-203ENST00000463916 KLHL41O60662 606 aa12.2□□□□□ -0.46
XRN1-203ENST00000463916 CYC1P08574 325 aa12.2□□□□□ -0.46
XRN1-203ENST00000463916 GFAPP14136 432 aa12.2□□□□□ -0.46
XRN1-203ENST00000463916 IL10P22301 178 aa12.2□□□□□ -0.46
XRN1-203ENST00000463916 SOX11P35716 441 aa12.2□□□□□ -0.46
XRN1-203ENST00000463916 SERPINB9P50453 376 aa12.2□□□□□ -0.46
XRN1-203ENST00000463916 ALDH18A1P54886 795 aaKnown RBP12.2□□□□□ -0.46
XRN1-203ENST00000463916 PCDH1Q08174 1060 aa12.2□□□□□ -0.46
XRN1-203ENST00000463916 CRB2Q5IJ48 1285 aa12.2□□□□□ -0.46
XRN1-203ENST00000463916 GAL3ST3Q96A11 431 aa12.2□□□□□ -0.46
XRN1-203ENST00000463916 SNRNP40Q96DI7 357 aaKnown RBP12.2□□□□□ -0.46
XRN1-203ENST00000463916 QRFPRQ96P65 431 aa12.2□□□□□ -0.46
XRN1-203ENST00000463916 TUBB6Q9BUF5 446 aa12.2□□□□□ -0.46
XRN1-203ENST00000463916 PLA2G3Q9NZ20 509 aa12.2□□□□□ -0.46
XRN1-203ENST00000463916 CPSF2Q9P2I0 782 aaKnown RBP12.2□□□□□ -0.46
XRN1-203ENST00000463916 EXOC1LA0A1B0GW35 172 aa12.19□□□□□ -0.46
XRN1-203ENST00000463916 MAGEB17A8MXT2 336 aa12.19□□□□□ -0.46
XRN1-203ENST00000463916 SH3BGRLO75368 114 aa12.19□□□□□ -0.46
XRN1-203ENST00000463916 KRT38O76015 456 aa12.19□□□□□ -0.46
XRN1-203ENST00000463916 F10P00742 488 aa12.19□□□□□ -0.46
XRN1-203ENST00000463916 ABHD2P08910 425 aa12.19□□□□□ -0.46
XRN1-203ENST00000463916 EPB42P16452 691 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms