RNA–Protein interactions for RNA: ENST00000463829.1

USP9X-204, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

TSL 3

Gene USP9X, Length 666 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-204ENST00000463829 TCP10L2B9ZVM9 353 aa3.59□□□□□ -1.83
USP9X-204ENST00000463829 RTCAO00442 366 aaKnown RBP3.59□□□□□ -1.83
USP9X-204ENST00000463829 ZNF263O14978 683 aa3.59□□□□□ -1.83
USP9X-204ENST00000463829 ATP9AO75110 1047 aa3.59□□□□□ -1.83
USP9X-204ENST00000463829 GIFP27352 417 aa3.59□□□□□ -1.83
USP9X-204ENST00000463829 PDHA2P29803 388 aa3.59□□□□□ -1.83
USP9X-204ENST00000463829 SRD5A2P31213 254 aa3.59□□□□□ -1.83
USP9X-204ENST00000463829 STX1BP61266 288 aa3.59□□□□□ -1.83
USP9X-204ENST00000463829 FAM189A2Q15884 450 aa3.59□□□□□ -1.83
USP9X-204ENST00000463829 FUT11Q495W5 492 aa3.59□□□□□ -1.83
USP9X-204ENST00000463829 LRRC37A5PQ49AS3 106 aa3.59□□□□□ -1.83
USP9X-204ENST00000463829 C1QTNF12Q5T7M4 302 aa3.59□□□□□ -1.83
USP9X-204ENST00000463829 LCLAT1Q6UWP7 414 aa3.59□□□□□ -1.83
USP9X-204ENST00000463829 IQCA1Q86XH1 822 aa3.59□□□□□ -1.83
USP9X-204ENST00000463829 KRTAP7-1Q8IUC3 87 aa3.59□□□□□ -1.83
USP9X-204ENST00000463829 AQP12AQ8IXF9 295 aa3.59□□□□□ -1.83
USP9X-204ENST00000463829 ZC3H3Q8IXZ2 948 aaKnown RBP3.59□□□□□ -1.83
USP9X-204ENST00000463829 KLHDC8AQ8IYD2 350 aa3.59□□□□□ -1.83
USP9X-204ENST00000463829 TDHQ8IZJ6 230 aa3.59□□□□□ -1.83
USP9X-204ENST00000463829 CNRIP1Q96F85 164 aaPredicted RBP3.59□□□□□ -1.83
USP9X-204ENST00000463829 CDKN2AIPNLQ96HQ2 116 aa3.59□□□□□ -1.83
USP9X-204ENST00000463829 AGAP4Q96P64 663 aa3.59□□□□□ -1.83
USP9X-204ENST00000463829 RASL10BQ96S79 203 aa3.59□□□□□ -1.83
USP9X-204ENST00000463829 PCDHB18PQ96TA0 734 aa3.59□□□□□ -1.83
USP9X-204ENST00000463829 PAPOLGQ9BWT3 736 aaKnown RBP3.59□□□□□ -1.83
USP9X-204ENST00000463829 GFRA4Q9GZZ7 299 aa3.59□□□□□ -1.83
USP9X-204ENST00000463829 MMADHCQ9H3L0 296 aaPredicted RBP3.59□□□□□ -1.83
USP9X-204ENST00000463829 CUEDC2Q9H467 287 aa3.59□□□□□ -1.83
USP9X-204ENST00000463829 NDE1Q9NXR1 346 aa3.59□□□□□ -1.83
USP9X-204ENST00000463829 DBF4Q9UBU7 674 aaPredicted RBP3.59□□□□□ -1.83
USP9X-204ENST00000463829 ACEP12821 1306 aa3.59□□□□□ -1.83
USP9X-204ENST00000463829 NEDD4P46934 1319 aa3.59□□□□□ -1.83
USP9X-204ENST00000463829 A0A0J9YWU9 116 aa3.58□□□□□ -1.84
USP9X-204ENST00000463829 FAM149AA5PLN7 773 aa3.58□□□□□ -1.84
USP9X-204ENST00000463829 ZNF732B4DXR9 585 aa3.58□□□□□ -1.84
USP9X-204ENST00000463829 M0R296 226 aa3.58□□□□□ -1.84
USP9X-204ENST00000463829 RNF103O00237 685 aa3.58□□□□□ -1.84
USP9X-204ENST00000463829 TFECO14948 347 aaPredicted RBP3.58□□□□□ -1.84
USP9X-204ENST00000463829 NME6O75414 186 aaPredicted RBP3.58□□□□□ -1.84
USP9X-204ENST00000463829 GLCEO94923 617 aa3.58□□□□□ -1.84
USP9X-204ENST00000463829 C4BPBP20851 252 aa3.58□□□□□ -1.84
USP9X-204ENST00000463829 EDNRAP25101 427 aa3.58□□□□□ -1.84
USP9X-204ENST00000463829 GPR183P32249 361 aa3.58□□□□□ -1.84
USP9X-204ENST00000463829 FEN1P39748 380 aaKnown RBP3.58□□□□□ -1.84
USP9X-204ENST00000463829 SLC1A3P43003 542 aa3.58□□□□□ -1.84
USP9X-204ENST00000463829 ERVK-16P61578 105 aa3.58□□□□□ -1.84
USP9X-204ENST00000463829 FKBP1BP68106 108 aa3.58□□□□□ -1.84
USP9X-204ENST00000463829 SLC34A1Q06495 639 aa3.58□□□□□ -1.84
USP9X-204ENST00000463829 CALCOCO2Q13137 446 aa3.58□□□□□ -1.84
USP9X-204ENST00000463829 NFATC2Q13469 925 aa3.58□□□□□ -1.84
USP9X-204ENST00000463829 MAPK11Q15759 364 aa3.58□□□□□ -1.84
USP9X-204ENST00000463829 SMU1Q2TAY7 513 aa3.58□□□□□ -1.84
USP9X-204ENST00000463829 CCDC184Q52MB2 194 aa3.58□□□□□ -1.84
USP9X-204ENST00000463829 GLRA4Q5JXX5 417 aa3.58□□□□□ -1.84
USP9X-204ENST00000463829 SPANXN4Q5MJ08 99 aa3.58□□□□□ -1.84
USP9X-204ENST00000463829 AGAP6Q5VW22 663 aa3.58□□□□□ -1.84
USP9X-204ENST00000463829 IYDQ6PHW0 289 aa3.58□□□□□ -1.84
USP9X-204ENST00000463829 C3P1Q6ZMU1 363 aa3.58□□□□□ -1.84
USP9X-204ENST00000463829 RFPL4BQ6ZWI9 263 aa3.58□□□□□ -1.84
USP9X-204ENST00000463829 NUP93Q8N1F7 819 aa3.58□□□□□ -1.84
USP9X-204ENST00000463829 METTL4Q8N3J2 472 aa3.58□□□□□ -1.84
USP9X-204ENST00000463829 OR10G7Q8NGN6 311 aa3.58□□□□□ -1.84
USP9X-204ENST00000463829 IWS1Q96ST2 819 aa3.58□□□□□ -1.84
USP9X-204ENST00000463829 TRIM15Q9C019 465 aa3.58□□□□□ -1.84
USP9X-204ENST00000463829 ALDH8A1Q9H2A2 487 aaPredicted RBP3.58□□□□□ -1.84
USP9X-204ENST00000463829 C3orf14Q9HBI5 128 aa3.58□□□□□ -1.84
USP9X-204ENST00000463829 IL1RAPL2Q9NP60 686 aa3.58□□□□□ -1.84
USP9X-204ENST00000463829 MRPL17Q9NRX2 175 aaKnown RBP3.58□□□□□ -1.84
USP9X-204ENST00000463829 NLGN3Q9NZ94 848 aa3.58□□□□□ -1.84
USP9X-204ENST00000463829 CNIH4Q9P003 139 aa3.58□□□□□ -1.84
USP9X-204ENST00000463829 PLCL2Q9UPR0 1127 aa3.58□□□□□ -1.84
USP9X-204ENST00000463829 SNED1Q8TER0 1413 aa3.58□□□□□ -1.84
USP9X-204ENST00000463829 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.57□□□□□ -1.84
USP9X-204ENST00000463829 MAGEB16A2A368 324 aa3.57□□□□□ -1.84
USP9X-204ENST00000463829 LRRD1A4D1F6 860 aa3.57□□□□□ -1.84
USP9X-204ENST00000463829 GLTPD2A6NH11 291 aa3.57□□□□□ -1.84
USP9X-204ENST00000463829 K7EQD1 137 aa3.57□□□□□ -1.84
USP9X-204ENST00000463829 MLNRO43193 412 aa3.57□□□□□ -1.84
USP9X-204ENST00000463829 TLX2O43763 284 aaPredicted RBP3.57□□□□□ -1.84
USP9X-204ENST00000463829 IDH3BO43837 385 aa3.57□□□□□ -1.84
USP9X-204ENST00000463829 ECE2O60344 883 aa3.57□□□□□ -1.84
USP9X-204ENST00000463829 CLN5O75503 358 aa3.57□□□□□ -1.84
USP9X-204ENST00000463829 MTRF1O75570 445 aaKnown RBP3.57□□□□□ -1.84
USP9X-204ENST00000463829 LETM1O95202 739 aaPredicted RBP3.57□□□□□ -1.84
USP9X-204ENST00000463829 RPLP0P05388 317 aaKnown RBP3.57□□□□□ -1.84
USP9X-204ENST00000463829 CLCN4P51793 760 aa3.57□□□□□ -1.84
USP9X-204ENST00000463829 SLC3A1Q07837 685 aa3.57□□□□□ -1.84
USP9X-204ENST00000463829 CNTN1Q12860 1018 aa3.57□□□□□ -1.84
USP9X-204ENST00000463829 ZNF177Q13360 481 aaPredicted RBP3.57□□□□□ -1.84
USP9X-204ENST00000463829 TAF1BQ53T94 588 aaPredicted RBP3.57□□□□□ -1.84
USP9X-204ENST00000463829 METTL7BQ6UX53 244 aa3.57□□□□□ -1.84
USP9X-204ENST00000463829 C17orf107Q6ZR85 190 aa3.57□□□□□ -1.84
USP9X-204ENST00000463829 CCDC91Q7Z6B0 441 aa3.57□□□□□ -1.84
USP9X-204ENST00000463829 ZFAND4Q86XD8 727 aa3.57□□□□□ -1.84
USP9X-204ENST00000463829 CCDC83Q8IWF9 413 aa3.57□□□□□ -1.84
USP9X-204ENST00000463829 SMYD1Q8NB12 490 aa3.57□□□□□ -1.84
USP9X-204ENST00000463829 RNF149Q8NC42 400 aa3.57□□□□□ -1.84
USP9X-204ENST00000463829 PRSS33Q8NF86 280 aa3.57□□□□□ -1.84
USP9X-204ENST00000463829 OR5M9Q8NGP3 310 aa3.57□□□□□ -1.84
USP9X-204ENST00000463829 RPLP0P6Q8NHW5 317 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms