RNA–Protein interactions for RNA: ENST00000463487.1

COL9A3-204, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-204ENST00000463487 ADPRMQ3LIE5 342 aa18.77■□□□□ 0.6
COL9A3-204ENST00000463487 RPS27LQ71UM5 84 aaKnown RBP18.77■□□□□ 0.6
COL9A3-204ENST00000463487 COX15Q7KZN9 410 aa18.77■□□□□ 0.6
COL9A3-204ENST00000463487 PPP1R14CQ8TAE6 165 aa18.77■□□□□ 0.6
COL9A3-204ENST00000463487 MS4A6EQ96DS6 147 aa18.77■□□□□ 0.6
COL9A3-204ENST00000463487 MTERF1Q99551 399 aaKnown RBP18.77■□□□□ 0.6
COL9A3-204ENST00000463487 MS4A8Q9BY19 250 aa18.77■□□□□ 0.6
COL9A3-204ENST00000463487 SLC29A3Q9BZD2 475 aa18.77■□□□□ 0.6
COL9A3-204ENST00000463487 DMRT3Q9NQL9 472 aa18.77■□□□□ 0.6
COL9A3-204ENST00000463487 SLC22A11Q9NSA0 550 aa18.77■□□□□ 0.6
COL9A3-204ENST00000463487 NMRK1Q9NWW6 199 aa18.77■□□□□ 0.6
COL9A3-204ENST00000463487 PSD3Q9NYI0 1048 aa18.77■□□□□ 0.6
COL9A3-204ENST00000463487 CTSFQ9UBX1 484 aa18.77■□□□□ 0.6
COL9A3-204ENST00000463487 MRPS18BQ9Y676 258 aaKnown RBP18.77■□□□□ 0.6
COL9A3-204ENST00000463487 ANKRD11Q6UB99 2663 aaPredicted RBP18.77■□□□□ 0.59
COL9A3-204ENST00000463487 IGLV3-12A0A075B6K2 115 aa18.76■□□□□ 0.59
COL9A3-204ENST00000463487 SGK494L7N484 410 aa18.76■□□□□ 0.59
COL9A3-204ENST00000463487 RDH16O75452 317 aa18.76■□□□□ 0.59
COL9A3-204ENST00000463487 OR4F21O95013 312 aa18.76■□□□□ 0.59
COL9A3-204ENST00000463487 ESRRBO95718 433 aa18.76■□□□□ 0.59
COL9A3-204ENST00000463487 TGFB1P01137 390 aa18.76■□□□□ 0.59
COL9A3-204ENST00000463487 IGHEP01854 428 aa18.76■□□□□ 0.59
COL9A3-204ENST00000463487 ALDH3A1P30838 453 aa18.76■□□□□ 0.59
COL9A3-204ENST00000463487 HNRNPH1P31943 449 aaKnown RBP18.76■□□□□ 0.59
COL9A3-204ENST00000463487 SERPINB5P36952 375 aa18.76■□□□□ 0.59
COL9A3-204ENST00000463487 RPS18P62269 152 aaKnown RBP18.76■□□□□ 0.59
COL9A3-204ENST00000463487 CDC20Q12834 499 aa18.76■□□□□ 0.59
COL9A3-204ENST00000463487 HYAL2Q12891 473 aa18.76■□□□□ 0.59
COL9A3-204ENST00000463487 COL9A2Q14055 689 aaPredicted RBP18.76■□□□□ 0.59
COL9A3-204ENST00000463487 RCN2Q14257 317 aa18.76■□□□□ 0.59
COL9A3-204ENST00000463487 SSPNQ14714 243 aa18.76■□□□□ 0.59
COL9A3-204ENST00000463487 NKG7Q16617 165 aa18.76■□□□□ 0.59
COL9A3-204ENST00000463487 UGT8Q16880 541 aa18.76■□□□□ 0.59
COL9A3-204ENST00000463487 AGBL2Q5U5Z8 902 aa18.76■□□□□ 0.59
COL9A3-204ENST00000463487 KHDRBS2Q5VWX1 349 aaKnown RBP18.76■□□□□ 0.59
COL9A3-204ENST00000463487 LETMD1Q6P1Q0 360 aa18.76■□□□□ 0.59
COL9A3-204ENST00000463487 GPR155Q7Z3F1 870 aa18.76■□□□□ 0.59
COL9A3-204ENST00000463487 VN1R5Q7Z5H4 357 aa18.76■□□□□ 0.59
COL9A3-204ENST00000463487 AMER3Q8N944 861 aa18.76■□□□□ 0.59
COL9A3-204ENST00000463487 WDR20Q8TBZ3 569 aa18.76■□□□□ 0.59
COL9A3-204ENST00000463487 SNRNP27Q8WVK2 155 aaKnown RBP18.76■□□□□ 0.59
COL9A3-204ENST00000463487 THAP4Q8WY91 577 aa18.76■□□□□ 0.59
COL9A3-204ENST00000463487 NACC2Q96BF6 587 aa18.76■□□□□ 0.59
COL9A3-204ENST00000463487 ZBTB9Q96C00 473 aa18.76■□□□□ 0.59
COL9A3-204ENST00000463487 CNDP1Q96KN2 507 aa18.76■□□□□ 0.59
COL9A3-204ENST00000463487 IP6K3Q96PC2 410 aa18.76■□□□□ 0.59
COL9A3-204ENST00000463487 TGIF2Q9GZN2 237 aa18.76■□□□□ 0.59
COL9A3-204ENST00000463487 EML4Q9HC35 981 aaKnown RBP18.76■□□□□ 0.59
COL9A3-204ENST00000463487 MID1IP1Q9NPA3 183 aa18.76■□□□□ 0.59
COL9A3-204ENST00000463487 PPT2Q9UMR5 302 aa18.76■□□□□ 0.59
COL9A3-204ENST00000463487 UQCRHLA0A096LP55 91 aa18.75■□□□□ 0.59
COL9A3-204ENST00000463487 PSMD12O00232 456 aaPredicted RBP18.75■□□□□ 0.59
COL9A3-204ENST00000463487 FFAR3O14843 346 aa18.75■□□□□ 0.59
COL9A3-204ENST00000463487 PCDH17O14917 1159 aa18.75■□□□□ 0.59
COL9A3-204ENST00000463487 GPR42O15529 346 aa18.75■□□□□ 0.59
COL9A3-204ENST00000463487 B3GALT2O43825 422 aa18.75■□□□□ 0.59
COL9A3-204ENST00000463487 UQCRHP07919 91 aa18.75■□□□□ 0.59
COL9A3-204ENST00000463487 ZGLP1P0C6A0 271 aa18.75■□□□□ 0.59
COL9A3-204ENST00000463487 SMIM10L1P0DMW3 83 aa18.75■□□□□ 0.59
COL9A3-204ENST00000463487 PRKAR1AP10644 381 aa18.75■□□□□ 0.59
COL9A3-204ENST00000463487 NEFHP12036 1026 aa18.75■□□□□ 0.59
COL9A3-204ENST00000463487 TSFMP43897 325 aaKnown RBP18.75■□□□□ 0.59
COL9A3-204ENST00000463487 ARFIP1P53367 373 aa18.75■□□□□ 0.59
COL9A3-204ENST00000463487 PLA2G16P53816 162 aa18.75■□□□□ 0.59
COL9A3-204ENST00000463487 MAGOHP61326 146 aaKnown RBP18.75■□□□□ 0.59
COL9A3-204ENST00000463487 BTN3A2P78410 334 aa18.75■□□□□ 0.59
COL9A3-204ENST00000463487 ZNF33BQ06732 778 aa18.75■□□□□ 0.59
COL9A3-204ENST00000463487 CUL3Q13618 768 aa18.75■□□□□ 0.59
COL9A3-204ENST00000463487 ERV3-1Q14264 604 aa18.75■□□□□ 0.59
COL9A3-204ENST00000463487 ADNP2Q6IQ32 1131 aa18.75■□□□□ 0.59
COL9A3-204ENST00000463487 PRSS41Q7RTY9 318 aa18.75■□□□□ 0.59
COL9A3-204ENST00000463487 NUDCD3Q8IVD9 361 aa18.75■□□□□ 0.59
COL9A3-204ENST00000463487 DTWD1Q8N5C7 304 aa18.75■□□□□ 0.59
COL9A3-204ENST00000463487 CDYL2Q8N8U2 506 aa18.75■□□□□ 0.59
COL9A3-204ENST00000463487 OR51Q1Q8NH59 317 aa18.75■□□□□ 0.59
COL9A3-204ENST00000463487 METTL6Q8TCB7 284 aa18.75■□□□□ 0.59
COL9A3-204ENST00000463487 STT3BQ8TCJ2 826 aa18.75■□□□□ 0.59
COL9A3-204ENST00000463487 ADAMTS18Q8TE60 1221 aa18.75■□□□□ 0.59
COL9A3-204ENST00000463487 RGMAQ96B86 450 aa18.75■□□□□ 0.59
COL9A3-204ENST00000463487 SMIM10Q96HG1 83 aa18.75■□□□□ 0.59
COL9A3-204ENST00000463487 F2RL3Q96RI0 385 aa18.75■□□□□ 0.59
COL9A3-204ENST00000463487 SERINC2Q96SA4 455 aa18.75■□□□□ 0.59
COL9A3-204ENST00000463487 SERPINI1Q99574 410 aa18.75■□□□□ 0.59
COL9A3-204ENST00000463487 TBCDQ9BTW9 1192 aa18.75■□□□□ 0.59
COL9A3-204ENST00000463487 CRB3Q9BUF7 120 aa18.75■□□□□ 0.59
COL9A3-204ENST00000463487 NPLQ9BXD5 320 aaPredicted RBP18.75■□□□□ 0.59
COL9A3-204ENST00000463487 KLHL31Q9H511 634 aa18.75■□□□□ 0.59
COL9A3-204ENST00000463487 SEMA3GQ9NS98 782 aa18.75■□□□□ 0.59
COL9A3-204ENST00000463487 NKIRAS1Q9NYS0 192 aa18.75■□□□□ 0.59
COL9A3-204ENST00000463487 POLHQ9Y253 713 aa18.75■□□□□ 0.59
COL9A3-204ENST00000463487 FER1L5A0AVI2 2057 aa18.75■□□□□ 0.59
COL9A3-204ENST00000463487 VSTM2BA6NLU5 285 aa18.74■□□□□ 0.59
COL9A3-204ENST00000463487 MAGEB17A8MXT2 336 aa18.74■□□□□ 0.59
COL9A3-204ENST00000463487 BIRC5O15392 142 aa18.74■□□□□ 0.59
COL9A3-204ENST00000463487 NPHS1O60500 1241 aa18.74■□□□□ 0.59
COL9A3-204ENST00000463487 KLF7O75840 302 aaPredicted RBP18.74■□□□□ 0.59
COL9A3-204ENST00000463487 BPGMP07738 259 aa18.74■□□□□ 0.59
COL9A3-204ENST00000463487 CYC1P08574 325 aa18.74■□□□□ 0.59
COL9A3-204ENST00000463487 WT1P19544 449 aaPredicted RBP18.74■□□□□ 0.59
COL9A3-204ENST00000463487 JAK1P23458 1154 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms