RNA–Protein interactions for RNA: ENST00000463369.5

SHQ1-203, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 2 BASIC

Gene SHQ1, Length 2,065 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-203ENST00000463369 MOGAT3Q86VF5 341 aa8.39□□□□□ -1.07
SHQ1-203ENST00000463369 TCAIMQ8N3R3 496 aa8.39□□□□□ -1.07
SHQ1-203ENST00000463369 TTC9BQ8N6N2 239 aa8.39□□□□□ -1.07
SHQ1-203ENST00000463369 OR6C4Q8NGE1 309 aa8.39□□□□□ -1.07
SHQ1-203ENST00000463369 DEDD2Q8WXF8 326 aa8.39□□□□□ -1.07
SHQ1-203ENST00000463369 TSPAN17Q96FV3 270 aa8.39□□□□□ -1.07
SHQ1-203ENST00000463369 ZNF583Q96ND8 569 aa8.39□□□□□ -1.07
SHQ1-203ENST00000463369 ACOX2Q99424 681 aa8.39□□□□□ -1.07
SHQ1-203ENST00000463369 VAT1Q99536 393 aa8.39□□□□□ -1.07
SHQ1-203ENST00000463369 TCF25Q9BQ70 676 aa8.39□□□□□ -1.07
SHQ1-203ENST00000463369 C17orf62Q9BQA9 187 aa8.39□□□□□ -1.07
SHQ1-203ENST00000463369 SLC30A2Q9BRI3 323 aa8.39□□□□□ -1.07
SHQ1-203ENST00000463369 CRISPLD1Q9H336 500 aa8.39□□□□□ -1.07
SHQ1-203ENST00000463369 PRO3102Q9H379 93 aa8.39□□□□□ -1.07
SHQ1-203ENST00000463369 OBP2BQ9NPH6 170 aa8.39□□□□□ -1.07
SHQ1-203ENST00000463369 SLC2A6Q9UGQ3 507 aa8.39□□□□□ -1.07
SHQ1-203ENST00000463369 NUFIP1Q9UHK0 495 aaKnown RBP8.39□□□□□ -1.07
SHQ1-203ENST00000463369 PKP3Q9Y446 797 aa8.39□□□□□ -1.07
SHQ1-203ENST00000463369 SLC12A8A0AV02 714 aa8.38□□□□□ -1.07
SHQ1-203ENST00000463369 H3BML4 177 aa8.38□□□□□ -1.07
SHQ1-203ENST00000463369 KERAO60938 352 aa8.38□□□□□ -1.07
SHQ1-203ENST00000463369 CNPP09543 421 aaKnown RBP8.38□□□□□ -1.07
SHQ1-203ENST00000463369 ERCC2P18074 760 aa8.38□□□□□ -1.07
SHQ1-203ENST00000463369 PAMP19021 973 aa8.38□□□□□ -1.07
SHQ1-203ENST00000463369 IGFBP5P24593 272 aa8.38□□□□□ -1.07
SHQ1-203ENST00000463369 LSSP48449 732 aa8.38□□□□□ -1.07
SHQ1-203ENST00000463369 ALDH9A1P49189 494 aa8.38□□□□□ -1.07
SHQ1-203ENST00000463369 CLCN5P51795 746 aa8.38□□□□□ -1.07
SHQ1-203ENST00000463369 TNK1Q13470 666 aa8.38□□□□□ -1.07
SHQ1-203ENST00000463369 EFR3AQ14156 821 aa8.38□□□□□ -1.07
SHQ1-203ENST00000463369 MAD2L1BPQ15013 274 aaPredicted RBP8.38□□□□□ -1.07
SHQ1-203ENST00000463369 AGERQ15109 404 aa8.38□□□□□ -1.07
SHQ1-203ENST00000463369 MPEG1Q2M385 716 aa8.38□□□□□ -1.07
SHQ1-203ENST00000463369 ZNF789Q5FWF6 425 aa8.38□□□□□ -1.07
SHQ1-203ENST00000463369 KRBOX4Q5JUW0 171 aa8.38□□□□□ -1.07
SHQ1-203ENST00000463369 RAP1GAP2Q684P5 730 aa8.38□□□□□ -1.07
SHQ1-203ENST00000463369 PM20D1Q6GTS8 502 aa8.38□□□□□ -1.07
SHQ1-203ENST00000463369 TMEM207Q6UWW9 146 aa8.38□□□□□ -1.07
SHQ1-203ENST00000463369 GPRIN1Q7Z2K8 1008 aa8.38□□□□□ -1.07
SHQ1-203ENST00000463369 SLC46A3Q7Z3Q1 461 aa8.38□□□□□ -1.07
SHQ1-203ENST00000463369 CYP4Z1Q86W10 505 aa8.38□□□□□ -1.07
SHQ1-203ENST00000463369 SCN4BQ8IWT1 228 aa8.38□□□□□ -1.07
SHQ1-203ENST00000463369 KLHDC8BQ8IXV7 354 aa8.38□□□□□ -1.07
SHQ1-203ENST00000463369 TCTE3Q8IZS6 198 aa8.38□□□□□ -1.07
SHQ1-203ENST00000463369 MRPL43Q8N983 215 aaKnown RBP8.38□□□□□ -1.07
SHQ1-203ENST00000463369 AGBL5Q8NDL9 886 aa8.38□□□□□ -1.07
SHQ1-203ENST00000463369 OR4M1Q8NGD0 313 aa8.38□□□□□ -1.07
SHQ1-203ENST00000463369 PTP4A1Q93096 173 aa8.38□□□□□ -1.07
SHQ1-203ENST00000463369 KCNC2Q96PR1 638 aa8.38□□□□□ -1.07
SHQ1-203ENST00000463369 ORAI3Q9BRQ5 295 aa8.38□□□□□ -1.07
SHQ1-203ENST00000463369 C1QTNF7Q9BXJ2 289 aa8.38□□□□□ -1.07
SHQ1-203ENST00000463369 GSX2Q9BZM3 304 aa8.38□□□□□ -1.07
SHQ1-203ENST00000463369 NKX2-4Q9H2Z4 354 aa8.38□□□□□ -1.07
SHQ1-203ENST00000463369 NCOR1P1Q9H4R4 102 aa8.38□□□□□ -1.07
SHQ1-203ENST00000463369 ZNF556Q9HAH1 456 aa8.38□□□□□ -1.07
SHQ1-203ENST00000463369 PRDM8Q9NQV8 689 aa8.38□□□□□ -1.07
SHQ1-203ENST00000463369 TREX1Q9NSU2 369 aa8.38□□□□□ -1.07
SHQ1-203ENST00000463369 TMEM45AQ9NWC5 275 aa8.38□□□□□ -1.07
SHQ1-203ENST00000463369 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.38□□□□□ -1.07
SHQ1-203ENST00000463369 EDARQ9UNE0 448 aa8.38□□□□□ -1.07
SHQ1-203ENST00000463369 GMPPBQ9Y5P6 360 aa8.38□□□□□ -1.07
SHQ1-203ENST00000463369 DOCK4Q8N1I0 1966 aa8.38□□□□□ -1.07
SHQ1-203ENST00000463369 MIA3Q5JRA6 1907 aa8.38□□□□□ -1.07
SHQ1-203ENST00000463369 OR6C70A6NIJ9 312 aa8.38□□□□□ -1.07
SHQ1-203ENST00000463369 CBX4O00257 560 aa8.38□□□□□ -1.07
SHQ1-203ENST00000463369 ARNTLO00327 626 aa8.38□□□□□ -1.07
SHQ1-203ENST00000463369 ANKRD28O15084 1053 aa8.38□□□□□ -1.07
SHQ1-203ENST00000463369 GSTA4O15217 222 aa8.38□□□□□ -1.07
SHQ1-203ENST00000463369 GRM6O15303 877 aa8.38□□□□□ -1.07
SHQ1-203ENST00000463369 CACNG3O60359 315 aa8.38□□□□□ -1.07
SHQ1-203ENST00000463369 SEC22BO75396 215 aa8.38□□□□□ -1.07
SHQ1-203ENST00000463369 OR7A10O76100 309 aa8.38□□□□□ -1.07
SHQ1-203ENST00000463369 SIX3O95343 332 aaPredicted RBP8.38□□□□□ -1.07
SHQ1-203ENST00000463369 WISP3O95389 354 aaPredicted RBP8.38□□□□□ -1.07
SHQ1-203ENST00000463369 JCHAINP01591 159 aa8.38□□□□□ -1.07
SHQ1-203ENST00000463369 PSKH1P11801 424 aa8.38□□□□□ -1.07
SHQ1-203ENST00000463369 GRK5P34947 590 aa8.38□□□□□ -1.07
SHQ1-203ENST00000463369 HCAR3P49019 387 aa8.38□□□□□ -1.07
SHQ1-203ENST00000463369 DAOAP59103 153 aa8.38□□□□□ -1.07
SHQ1-203ENST00000463369 CD83Q01151 205 aa8.38□□□□□ -1.07
SHQ1-203ENST00000463369 SEMA3BQ13214 749 aa8.38□□□□□ -1.07
SHQ1-203ENST00000463369 GPM6BQ13491 265 aa8.38□□□□□ -1.07
SHQ1-203ENST00000463369 NFE2L1Q14494 772 aa8.38□□□□□ -1.07
SHQ1-203ENST00000463369 IRF3Q14653 427 aa8.38□□□□□ -1.07
SHQ1-203ENST00000463369 TOR2AQ5JU69 321 aa8.38□□□□□ -1.07
SHQ1-203ENST00000463369 HECTD2Q5U5R9 776 aa8.38□□□□□ -1.07
SHQ1-203ENST00000463369 KIAA0930Q6ICG6 404 aaPredicted RBP8.38□□□□□ -1.07
SHQ1-203ENST00000463369 XKRXQ6PP77 449 aa8.38□□□□□ -1.07
SHQ1-203ENST00000463369 MEX3BQ6ZN04 569 aaKnown RBP8.38□□□□□ -1.07
SHQ1-203ENST00000463369 CREB3L2Q70SY1 520 aa8.38□□□□□ -1.07
SHQ1-203ENST00000463369 AHSA2Q719I0 299 aa8.38□□□□□ -1.07
SHQ1-203ENST00000463369 SYVN1Q86TM6 617 aa8.38□□□□□ -1.07
SHQ1-203ENST00000463369 TSPYL5Q86VY4 417 aaPredicted RBP8.38□□□□□ -1.07
SHQ1-203ENST00000463369 AMIGO1Q86WK6 493 aa8.38□□□□□ -1.07
SHQ1-203ENST00000463369 ZFAND4Q86XD8 727 aa8.38□□□□□ -1.07
SHQ1-203ENST00000463369 CCDC117Q8IWD4 279 aaPredicted RBP8.38□□□□□ -1.07
SHQ1-203ENST00000463369 DEFB106AQ8N104 65 aa8.38□□□□□ -1.07
SHQ1-203ENST00000463369 PTGR2Q8N8N7 351 aaPredicted RBP8.38□□□□□ -1.07
SHQ1-203ENST00000463369 OR52E4Q8NGH9 312 aa8.38□□□□□ -1.07
SHQ1-203ENST00000463369 PROKR1Q8TCW9 393 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms