RNA–Protein interactions for RNA: ENST00000463244.6

CPSF7-209, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-209ENST00000463244 TRBC2A0A5B9 178 aa19.38■□□□□ 0.69
CPSF7-209ENST00000463244 FOXO6A8MYZ6 492 aa19.38■□□□□ 0.69
CPSF7-209ENST00000463244 SLC16A5O15375 505 aa19.38■□□□□ 0.69
CPSF7-209ENST00000463244 CDC40O60508 579 aaKnown RBP eCLIP19.38■□□□□ 0.69
CPSF7-209ENST00000463244 ZNF888P0CJ79 500 aaPredicted RBP19.38■□□□□ 0.69
CPSF7-209ENST00000463244 RGS4P49798 205 aa19.38■□□□□ 0.69
CPSF7-209ENST00000463244 ABCA4P78363 2273 aa19.38■□□□□ 0.69
CPSF7-209ENST00000463244 DHX9Q08211 1270 aaKnown RBP19.38■□□□□ 0.69
CPSF7-209ENST00000463244 PHKG1Q16816 387 aa19.38■□□□□ 0.69
CPSF7-209ENST00000463244 UGT3A1Q6NUS8 523 aa19.38■□□□□ 0.69
CPSF7-209ENST00000463244 ABHD13Q7L211 337 aa19.38■□□□□ 0.69
CPSF7-209ENST00000463244 ZFP62Q8NB50 900 aaPredicted RBP19.38■□□□□ 0.69
CPSF7-209ENST00000463244 MCUQ8NE86 351 aa19.38■□□□□ 0.69
CPSF7-209ENST00000463244 SERPINB12Q96P63 405 aa19.38■□□□□ 0.69
CPSF7-209ENST00000463244 RBSNQ9H1K0 784 aa19.38■□□□□ 0.69
CPSF7-209ENST00000463244 TP63Q9H3D4 680 aaPredicted RBP19.38■□□□□ 0.69
CPSF7-209ENST00000463244 PLSCR2Q9NRY7 297 aa19.38■□□□□ 0.69
CPSF7-209ENST00000463244 RNF6Q9Y252 685 aa19.38■□□□□ 0.69
CPSF7-209ENST00000463244 NKX2-6A6NCS4 301 aa19.37■□□□□ 0.69
CPSF7-209ENST00000463244 PEX1O43933 1283 aa19.37■□□□□ 0.69
CPSF7-209ENST00000463244 SERPIND1P05546 499 aa19.37■□□□□ 0.69
CPSF7-209ENST00000463244 MAOAP21397 527 aa19.37■□□□□ 0.69
CPSF7-209ENST00000463244 MSX1P28360 303 aa19.37■□□□□ 0.69
CPSF7-209ENST00000463244 CHRNB4P30926 498 aa19.37■□□□□ 0.69
CPSF7-209ENST00000463244 RGS1Q08116 209 aa19.37■□□□□ 0.69
CPSF7-209ENST00000463244 DMRTC2Q8IXT2 367 aaPredicted RBP19.37■□□□□ 0.69
CPSF7-209ENST00000463244 MYO1HQ8N1T3 1032 aa19.37■□□□□ 0.69
CPSF7-209ENST00000463244 AGGF1Q8N302 714 aaeCLIP19.37■□□□□ 0.69
CPSF7-209ENST00000463244 APCDD1LQ8NCL9 501 aa19.37■□□□□ 0.69
CPSF7-209ENST00000463244 NT5CQ8TCD5 201 aa19.37■□□□□ 0.69
CPSF7-209ENST00000463244 PYCR2Q96C36 320 aa19.37■□□□□ 0.69
CPSF7-209ENST00000463244 SNF8Q96H20 258 aa19.37■□□□□ 0.69
CPSF7-209ENST00000463244 OR4K3Q96R72 315 aa19.37■□□□□ 0.69
CPSF7-209ENST00000463244 NDNQ99608 321 aa19.37■□□□□ 0.69
CPSF7-209ENST00000463244 UCK2Q9BZX2 261 aa19.37■□□□□ 0.69
CPSF7-209ENST00000463244 CLK4Q9HAZ1 481 aaKnown RBP19.37■□□□□ 0.69
CPSF7-209ENST00000463244 PRDM9Q9NQV7 894 aa19.37■□□□□ 0.69
CPSF7-209ENST00000463244 FAM90A27PA6NNH2 459 aa19.36■□□□□ 0.69
CPSF7-209ENST00000463244 GOLGA8MH3BSY2 632 aa19.36■□□□□ 0.69
CPSF7-209ENST00000463244 TOXO94900 526 aa19.36■□□□□ 0.69
CPSF7-209ENST00000463244 KRT14P02533 472 aa19.36■□□□□ 0.69
CPSF7-209ENST00000463244 MAGEA3P43357 314 aa19.36■□□□□ 0.69
CPSF7-209ENST00000463244 ART1P52961 327 aa19.36■□□□□ 0.69
CPSF7-209ENST00000463244 HSP90AA5PQ58FG0 334 aa19.36■□□□□ 0.69
CPSF7-209ENST00000463244 DUPD1Q68J44 220 aa19.36■□□□□ 0.69
CPSF7-209ENST00000463244 ARHGAP11AQ6P4F7 1023 aa19.36■□□□□ 0.69
CPSF7-209ENST00000463244 PAQR3Q6TCH7 311 aa19.36■□□□□ 0.69
CPSF7-209ENST00000463244 CYP4Z2PQ8N1L4 340 aa19.36■□□□□ 0.69
CPSF7-209ENST00000463244 RPRMLQ8N4K4 120 aa19.36■□□□□ 0.69
CPSF7-209ENST00000463244 TBC1D19Q8N5T2 526 aa19.36■□□□□ 0.69
CPSF7-209ENST00000463244 OR56A3Q8NH54 315 aa19.36■□□□□ 0.69
CPSF7-209ENST00000463244 UTP15Q8TED0 518 aaKnown RBP19.36■□□□□ 0.69
CPSF7-209ENST00000463244 RND1Q92730 232 aa19.36■□□□□ 0.69
CPSF7-209ENST00000463244 POM121Q96HA1 1249 aa19.36■□□□□ 0.69
CPSF7-209ENST00000463244 FAM167BQ9BTA0 163 aa19.36■□□□□ 0.69
CPSF7-209ENST00000463244 SPNS1Q9H2V7 528 aa19.36■□□□□ 0.69
CPSF7-209ENST00000463244 KCNJ16Q9NPI9 418 aa19.36■□□□□ 0.69
CPSF7-209ENST00000463244 ZFP69BQ9UJL9 534 aa19.36■□□□□ 0.69
CPSF7-209ENST00000463244 PRRC2AP48634 2157 aaKnown RBP19.36■□□□□ 0.69
CPSF7-209ENST00000463244 DIAPH2O60879 1101 aa19.35■□□□□ 0.69
CPSF7-209ENST00000463244 HIST1H2AGP0C0S8 130 aaPredicted RBP19.35■□□□□ 0.69
CPSF7-209ENST00000463244 RNH1P13489 461 aaKnown RBP19.35■□□□□ 0.69
CPSF7-209ENST00000463244 HIST1H2ADP20671 130 aa19.35■□□□□ 0.69
CPSF7-209ENST00000463244 AHRP35869 848 aa19.35■□□□□ 0.69
CPSF7-209ENST00000463244 SCTRP47872 440 aa19.35■□□□□ 0.69
CPSF7-209ENST00000463244 GPR85P60893 370 aa19.35■□□□□ 0.69
CPSF7-209ENST00000463244 EMC4Q5J8M3 183 aa19.35■□□□□ 0.69
CPSF7-209ENST00000463244 CATSPEREQ5SY80 951 aa19.35■□□□□ 0.69
CPSF7-209ENST00000463244 MDGA2Q7Z553 956 aa19.35■□□□□ 0.69
CPSF7-209ENST00000463244 TMEM156Q8N614 296 aa19.35■□□□□ 0.69
CPSF7-209ENST00000463244 C2CD4AQ8NCU7 369 aaPredicted RBP19.35■□□□□ 0.69
CPSF7-209ENST00000463244 B3GNT7Q8NFL0 401 aa19.35■□□□□ 0.69
CPSF7-209ENST00000463244 OR52N2Q8NGI0 321 aa19.35■□□□□ 0.69
CPSF7-209ENST00000463244 LINGO1Q96FE5 620 aa19.35■□□□□ 0.69
CPSF7-209ENST00000463244 HIST1H2AHQ96KK5 128 aa19.35■□□□□ 0.69
CPSF7-209ENST00000463244 HIST1H2AJQ99878 128 aa19.35■□□□□ 0.69
CPSF7-209ENST00000463244 H2AFJQ9BTM1 129 aa19.35■□□□□ 0.69
CPSF7-209ENST00000463244 NECTIN3Q9NQS3 549 aa19.35■□□□□ 0.69
CPSF7-209ENST00000463244 IARS2Q9NSE4 1012 aaKnown RBP19.35■□□□□ 0.69
CPSF7-209ENST00000463244 ARL15Q9NXU5 204 aa19.35■□□□□ 0.69
CPSF7-209ENST00000463244 TAS2R13Q9NYV9 303 aa19.35■□□□□ 0.69
CPSF7-209ENST00000463244 MAD1L1Q9Y6D9 718 aa19.35■□□□□ 0.69
CPSF7-209ENST00000463244 HRNRQ86YZ3 2850 aaPredicted RBP19.34■□□□□ 0.69
CPSF7-209ENST00000463244 TRBV11-1A0A0K0K1C0 115 aa19.34■□□□□ 0.69
CPSF7-209ENST00000463244 USP27XA6NNY8 438 aa19.34■□□□□ 0.69
CPSF7-209ENST00000463244 A8MUA0 341 aa19.34■□□□□ 0.69
CPSF7-209ENST00000463244 PSMD12O00232 456 aaPredicted RBP19.34■□□□□ 0.69
CPSF7-209ENST00000463244 ITGA10O75578 1167 aa19.34■□□□□ 0.69
CPSF7-209ENST00000463244 CLCN2P51788 898 aa19.34■□□□□ 0.69
CPSF7-209ENST00000463244 AP1S2P56377 157 aa19.34■□□□□ 0.69
CPSF7-209ENST00000463244 RAB8AP61006 207 aa19.34■□□□□ 0.69
CPSF7-209ENST00000463244 TERF2Q15554 542 aa19.34■□□□□ 0.69
CPSF7-209ENST00000463244 KIAA0408Q6ZU52 694 aa19.34■□□□□ 0.69
CPSF7-209ENST00000463244 ARMC2Q8NEN0 867 aa19.34■□□□□ 0.69
CPSF7-209ENST00000463244 SLC5A11Q8WWX8 675 aa19.34■□□□□ 0.69
CPSF7-209ENST00000463244 NEIL2Q969S2 332 aa19.34■□□□□ 0.69
CPSF7-209ENST00000463244 SIGLEC10Q96LC7 697 aa19.34■□□□□ 0.69
CPSF7-209ENST00000463244 ZNF559Q9BR84 538 aa19.34■□□□□ 0.69
CPSF7-209ENST00000463244 SLC6A16Q9GZN6 736 aa19.34■□□□□ 0.69
CPSF7-209ENST00000463244 ZFATQ9P243 1243 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms