RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 E2F3O00716 465 aa9.57□□□□□ -0.88
SF3A3-204ENST00000462258 CLGNO14967 610 aa9.57□□□□□ -0.88
SF3A3-204ENST00000462258 CHST10O43529 356 aa9.57□□□□□ -0.88
SF3A3-204ENST00000462258 CCNT2O60583 730 aaKnown RBP9.57□□□□□ -0.88
SF3A3-204ENST00000462258 KERAO60938 352 aa9.57□□□□□ -0.88
SF3A3-204ENST00000462258 H2AFYO75367 372 aaKnown RBP9.57□□□□□ -0.88
SF3A3-204ENST00000462258 SUPT3HO75486 399 aa9.57□□□□□ -0.88
SF3A3-204ENST00000462258 STK16O75716 305 aa9.57□□□□□ -0.88
SF3A3-204ENST00000462258 F10P00742 488 aa9.57□□□□□ -0.88
SF3A3-204ENST00000462258 LTA4HP09960 611 aaKnown RBP9.57□□□□□ -0.88
SF3A3-204ENST00000462258 RNH1P13489 461 aaKnown RBP9.57□□□□□ -0.88
SF3A3-204ENST00000462258 CRABP2P29373 138 aa9.57□□□□□ -0.88
SF3A3-204ENST00000462258 HNRNPH1P31943 449 aaKnown RBP9.57□□□□□ -0.88
SF3A3-204ENST00000462258 TNFSF10P50591 281 aa9.57□□□□□ -0.88
SF3A3-204ENST00000462258 DLG1Q12959 904 aa9.57□□□□□ -0.88
SF3A3-204ENST00000462258 UAP1Q16222 522 aaPredicted RBP9.57□□□□□ -0.88
SF3A3-204ENST00000462258 EXT1Q16394 746 aa9.57□□□□□ -0.88
SF3A3-204ENST00000462258 SFT2D3Q587I9 215 aa9.57□□□□□ -0.88
SF3A3-204ENST00000462258 XKR6Q5GH73 641 aa9.57□□□□□ -0.88
SF3A3-204ENST00000462258 UBAP2Q5T6F2 1119 aaKnown RBP9.57□□□□□ -0.88
SF3A3-204ENST00000462258 ABHD17BQ5VST6 288 aa9.57□□□□□ -0.88
SF3A3-204ENST00000462258 FAM180AQ6UWF9 173 aa9.57□□□□□ -0.88
SF3A3-204ENST00000462258 QSOX2Q6ZRP7 698 aa9.57□□□□□ -0.88
SF3A3-204ENST00000462258 CEP128Q6ZU80 1094 aa9.57□□□□□ -0.88
SF3A3-204ENST00000462258 MMGT1Q8N4V1 131 aa9.57□□□□□ -0.88
SF3A3-204ENST00000462258 PLPP5Q8NEB5 264 aa9.57□□□□□ -0.88
SF3A3-204ENST00000462258 CATSPER1Q8NEC5 780 aa9.57□□□□□ -0.88
SF3A3-204ENST00000462258 STAG3L4Q8TBR4 150 aa9.57□□□□□ -0.88
SF3A3-204ENST00000462258 UBTD2Q8WUN7 234 aa9.57□□□□□ -0.88
SF3A3-204ENST00000462258 ESAMQ96AP7 390 aa9.57□□□□□ -0.88
SF3A3-204ENST00000462258 MRRFQ96E11 262 aaKnown RBP9.57□□□□□ -0.88
SF3A3-204ENST00000462258 PTCD3Q96EY7 689 aaKnown RBP9.57□□□□□ -0.88
SF3A3-204ENST00000462258 SEC16BQ96JE7 1060 aa9.57□□□□□ -0.88
SF3A3-204ENST00000462258 FAR2Q96K12 515 aa9.57□□□□□ -0.88
SF3A3-204ENST00000462258 MAGEB10Q96LZ2 347 aaPredicted RBP9.57□□□□□ -0.88
SF3A3-204ENST00000462258 ATOH8Q96SQ7 321 aa9.57□□□□□ -0.88
SF3A3-204ENST00000462258 LPAR4Q99677 370 aa9.57□□□□□ -0.88
SF3A3-204ENST00000462258 BARD1Q99728 777 aaKnown RBP9.57□□□□□ -0.88
SF3A3-204ENST00000462258 EFCAB11Q9BUY7 163 aa9.57□□□□□ -0.88
SF3A3-204ENST00000462258 PITHD1Q9GZP4 211 aaPredicted RBP9.57□□□□□ -0.88
SF3A3-204ENST00000462258 AICDAQ9GZX7 198 aa9.57□□□□□ -0.88
SF3A3-204ENST00000462258 RNF32Q9H0A6 362 aa9.57□□□□□ -0.88
SF3A3-204ENST00000462258 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.57□□□□□ -0.88
SF3A3-204ENST00000462258 RHBGQ9H310 441 aa9.57□□□□□ -0.88
SF3A3-204ENST00000462258 CDC42EP4Q9H3Q1 356 aaKnown RBP9.57□□□□□ -0.88
SF3A3-204ENST00000462258 EHD1Q9H4M9 534 aa9.57□□□□□ -0.88
SF3A3-204ENST00000462258 KLHL31Q9H511 634 aa9.57□□□□□ -0.88
SF3A3-204ENST00000462258 CLK4Q9HAZ1 481 aaKnown RBP9.57□□□□□ -0.88
SF3A3-204ENST00000462258 NMRAL1Q9HBL8 299 aa9.57□□□□□ -0.88
SF3A3-204ENST00000462258 IGSF5Q9NSI5 407 aa9.57□□□□□ -0.88
SF3A3-204ENST00000462258 PLA2G3Q9NZ20 509 aa9.57□□□□□ -0.88
SF3A3-204ENST00000462258 TEKT2Q9UIF3 430 aa9.57□□□□□ -0.88
SF3A3-204ENST00000462258 ASB1Q9Y576 335 aa9.57□□□□□ -0.88
SF3A3-204ENST00000462258 NBPF19A0A087WUL8 3843 aa9.56□□□□□ -0.88
SF3A3-204ENST00000462258 SPTBN1Q01082 2364 aaKnown RBP9.56□□□□□ -0.88
SF3A3-204ENST00000462258 A0A087X1B8 175 aa9.56□□□□□ -0.88
SF3A3-204ENST00000462258 A0A088AWK7 358 aa9.56□□□□□ -0.88
SF3A3-204ENST00000462258 TRAV17A0A0B4J275 112 aa9.56□□□□□ -0.88
SF3A3-204ENST00000462258 A0A0G2JN53 185 aa9.56□□□□□ -0.88
SF3A3-204ENST00000462258 BLACEA4D250 179 aa9.56□□□□□ -0.88
SF3A3-204ENST00000462258 OR5H15A6NDH6 313 aa9.56□□□□□ -0.88
SF3A3-204ENST00000462258 ANKUB1A6NFN9 424 aa9.56□□□□□ -0.88
SF3A3-204ENST00000462258 ANKDD1BA6NHY2 528 aa9.56□□□□□ -0.88
SF3A3-204ENST00000462258 UBXN8O00124 270 aa9.56□□□□□ -0.88
SF3A3-204ENST00000462258 ERI3O43414 337 aaKnown RBP9.56□□□□□ -0.88
SF3A3-204ENST00000462258 PRAMEF4O60810 478 aa9.56□□□□□ -0.88
SF3A3-204ENST00000462258 B4GALT2O60909 372 aa9.56□□□□□ -0.88
SF3A3-204ENST00000462258 DNAJB6O75190 326 aa9.56□□□□□ -0.88
SF3A3-204ENST00000462258 CLEC3AO75596 197 aa9.56□□□□□ -0.88
SF3A3-204ENST00000462258 WDPCPO95876 746 aa9.56□□□□□ -0.88
SF3A3-204ENST00000462258 CTAGE8P0CG41 777 aa9.56□□□□□ -0.88
SF3A3-204ENST00000462258 SMIM10L1P0DMW3 83 aa9.56□□□□□ -0.88
SF3A3-204ENST00000462258 EPORP19235 508 aa9.56□□□□□ -0.88
SF3A3-204ENST00000462258 ZNF10P21506 573 aaPredicted RBP9.56□□□□□ -0.88
SF3A3-204ENST00000462258 HPDP32754 393 aaPredicted RBP9.56□□□□□ -0.88
SF3A3-204ENST00000462258 SERPINB8P50452 374 aa9.56□□□□□ -0.88
SF3A3-204ENST00000462258 OR4D2P58180 307 aa9.56□□□□□ -0.88
SF3A3-204ENST00000462258 SLC26A5P58743 744 aa9.56□□□□□ -0.88
SF3A3-204ENST00000462258 IRF9Q00978 393 aa9.56□□□□□ -0.88
SF3A3-204ENST00000462258 ELOAQ14241 798 aaKnown RBP9.56□□□□□ -0.88
SF3A3-204ENST00000462258 INAQ16352 499 aa9.56□□□□□ -0.88
SF3A3-204ENST00000462258 EIF2S3LQ2VIR3 472 aaKnown RBP9.56□□□□□ -0.88
SF3A3-204ENST00000462258 PAGE2BQ5JRK9 111 aa9.56□□□□□ -0.88
SF3A3-204ENST00000462258 MROH9Q5TGP6 573 aa9.56□□□□□ -0.88
SF3A3-204ENST00000462258 PRAMEF9Q5VWM5 478 aa9.56□□□□□ -0.88
SF3A3-204ENST00000462258 ADNP2Q6IQ32 1131 aa9.56□□□□□ -0.88
SF3A3-204ENST00000462258 VN1R5Q7Z5H4 357 aa9.56□□□□□ -0.88
SF3A3-204ENST00000462258 CCDC91Q7Z6B0 441 aa9.56□□□□□ -0.88
SF3A3-204ENST00000462258 ISCA2Q86U28 154 aa9.56□□□□□ -0.88
SF3A3-204ENST00000462258 CTAGE4Q8IX94 777 aa9.56□□□□□ -0.88
SF3A3-204ENST00000462258 CENPLQ8N0S6 344 aaPredicted RBP9.56□□□□□ -0.88
SF3A3-204ENST00000462258 CA13Q8N1Q1 262 aa9.56□□□□□ -0.88
SF3A3-204ENST00000462258 ST6GALNAC3Q8NDV1 305 aa9.56□□□□□ -0.88
SF3A3-204ENST00000462258 MNS1Q8NEH6 495 aa9.56□□□□□ -0.88
SF3A3-204ENST00000462258 OR1N1Q8NGS0 311 aa9.56□□□□□ -0.88
SF3A3-204ENST00000462258 PRR7Q8TB68 274 aa9.56□□□□□ -0.88
SF3A3-204ENST00000462258 GRHL3Q8TE85 626 aa9.56□□□□□ -0.88
SF3A3-204ENST00000462258 KCTD4Q8WVF5 259 aa9.56□□□□□ -0.88
SF3A3-204ENST00000462258 HAS2Q92819 552 aa9.56□□□□□ -0.88
SF3A3-204ENST00000462258 MS4A6EQ96DS6 147 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms