RNA–Protein interactions for RNA: ENST00000461578.1

PABPC4-208, Transcript of poly(A) binding protein cytoplasmic 4, human

TSL 5

Gene PABPC4, Length 193 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC4-208	ENST00000461578		A0A1W2PPB8	328 aa		12.81	□□□□□ -0.36
PABPC4-208	ENST00000461578		A0A1W2PRS3	328 aa		12.81	□□□□□ -0.36
PABPC4-208	ENST00000461578	FIGNL2	A6NMB9	653 aa		12.81	□□□□□ -0.36
PABPC4-208	ENST00000461578	KIR3DP1	A8MWS1	328 aa		12.81	□□□□□ -0.36
PABPC4-208	ENST00000461578		G3V3Y1	287 aa		12.81	□□□□□ -0.36
PABPC4-208	ENST00000461578	GFY	I3L273	518 aa		12.81	□□□□□ -0.36
PABPC4-208	ENST00000461578	TUBB4A	P04350	444 aa		12.81	□□□□□ -0.36
PABPC4-208	ENST00000461578	MPC1L	P0DKB6	136 aa		12.81	□□□□□ -0.36
PABPC4-208	ENST00000461578	GLI4	P10075	376 aa		12.81	□□□□□ -0.36
PABPC4-208	ENST00000461578	GRK3	P35626	688 aa		12.81	□□□□□ -0.36
PABPC4-208	ENST00000461578	ADH7	P40394	386 aa		12.81	□□□□□ -0.36
PABPC4-208	ENST00000461578	SKIV2L2	P42285	1042 aa	Known RBP	12.81	□□□□□ -0.36
PABPC4-208	ENST00000461578	KIR2DL3	P43628	341 aa		12.81	□□□□□ -0.36
PABPC4-208	ENST00000461578	ADAR	P55265	1226 aa	Known RBP	12.81	□□□□□ -0.36
PABPC4-208	ENST00000461578	BASP1	P80723	227 aa	Known RBP	12.81	□□□□□ -0.36
PABPC4-208	ENST00000461578	RPS6KA1	Q15418	735 aa		12.81	□□□□□ -0.36
PABPC4-208	ENST00000461578	TMEM198	Q66K66	360 aa		12.81	□□□□□ -0.36
PABPC4-208	ENST00000461578	RTL6	Q6ICC9	239 aa		12.81	□□□□□ -0.36
PABPC4-208	ENST00000461578	B3GNT6	Q6ZMB0	384 aa		12.81	□□□□□ -0.36
PABPC4-208	ENST00000461578	MBOAT1	Q6ZNC8	495 aa		12.81	□□□□□ -0.36
PABPC4-208	ENST00000461578	C16orf47	Q6ZP98	133 aa	Predicted RBP	12.81	□□□□□ -0.36
PABPC4-208	ENST00000461578	QSOX2	Q6ZRP7	698 aa		12.81	□□□□□ -0.36
PABPC4-208	ENST00000461578	CENPU	Q71F23	418 aa		12.81	□□□□□ -0.36
PABPC4-208	ENST00000461578	PIWIL4	Q7Z3Z4	852 aa	Known RBP	12.81	□□□□□ -0.36
PABPC4-208	ENST00000461578	BIVM	Q86UB2	503 aa		12.81	□□□□□ -0.36
PABPC4-208	ENST00000461578	MFSD9	Q8NBP5	474 aa		12.81	□□□□□ -0.36
PABPC4-208	ENST00000461578	PSD4	Q8NDX1	1056 aa		12.81	□□□□□ -0.36
PABPC4-208	ENST00000461578	ACRBP	Q8NEB7	543 aa		12.81	□□□□□ -0.36
PABPC4-208	ENST00000461578	SLCO2A1	Q92959	643 aa		12.81	□□□□□ -0.36
PABPC4-208	ENST00000461578	TCF12	Q99081	682 aa		12.81	□□□□□ -0.36
PABPC4-208	ENST00000461578	LIN28A	Q9H9Z2	209 aa	Known RBP	12.81	□□□□□ -0.36
PABPC4-208	ENST00000461578	NECTIN3	Q9NQS3	549 aa		12.81	□□□□□ -0.36
PABPC4-208	ENST00000461578	PAK5	Q9P286	719 aa		12.81	□□□□□ -0.36
PABPC4-208	ENST00000461578	ACOT7	O00154	380 aa		12.8	□□□□□ -0.36
PABPC4-208	ENST00000461578	CEP104	O60308	925 aa		12.8	□□□□□ -0.36
PABPC4-208	ENST00000461578	MYO1D	O94832	1006 aa		12.8	□□□□□ -0.36
PABPC4-208	ENST00000461578	ZNF888	P0CJ79	500 aa	Predicted RBP	12.8	□□□□□ -0.36
PABPC4-208	ENST00000461578	ALOX12	P18054	663 aa		12.8	□□□□□ -0.36
PABPC4-208	ENST00000461578	OGN	P20774	298 aa	Known RBP	12.8	□□□□□ -0.36
PABPC4-208	ENST00000461578	ADSL	P30566	484 aa	Predicted RBP	12.8	□□□□□ -0.36
PABPC4-208	ENST00000461578	UQCRC1	P31930	480 aa		12.8	□□□□□ -0.36
PABPC4-208	ENST00000461578	RPL22	P35268	128 aa	Known RBP	12.8	□□□□□ -0.36
PABPC4-208	ENST00000461578	NPY2R	P49146	381 aa		12.8	□□□□□ -0.36
PABPC4-208	ENST00000461578	SSR4	P51571	173 aa		12.8	□□□□□ -0.36
PABPC4-208	ENST00000461578	CLCN2	P51788	898 aa		12.8	□□□□□ -0.36
PABPC4-208	ENST00000461578	TERF1	P54274	439 aa		12.8	□□□□□ -0.36
PABPC4-208	ENST00000461578	KCTD19	Q17RG1	926 aa	Predicted RBP	12.8	□□□□□ -0.36
PABPC4-208	ENST00000461578	CYHR1	Q6ZMK1	362 aa		12.8	□□□□□ -0.36
PABPC4-208	ENST00000461578	CPNE9	Q8IYJ1	553 aa		12.8	□□□□□ -0.36
PABPC4-208	ENST00000461578	AFAP1L2	Q8N4X5	818 aa		12.8	□□□□□ -0.36
PABPC4-208	ENST00000461578	APCDD1L	Q8NCL9	501 aa		12.8	□□□□□ -0.36
PABPC4-208	ENST00000461578	CREB3L4	Q8TEY5	395 aa		12.8	□□□□□ -0.36
PABPC4-208	ENST00000461578	KIFC1	Q9BW19	673 aa		12.8	□□□□□ -0.36
PABPC4-208	ENST00000461578	TTTY12	Q9BZ98	90 aa		12.8	□□□□□ -0.36
PABPC4-208	ENST00000461578	DMRT3	Q9NQL9	472 aa		12.8	□□□□□ -0.36
PABPC4-208	ENST00000461578	ALKBH4	Q9NXW9	302 aa		12.8	□□□□□ -0.36
PABPC4-208	ENST00000461578	EDAR	Q9UNE0	448 aa		12.8	□□□□□ -0.36
PABPC4-208	ENST00000461578	DRG1	Q9Y295	367 aa	Known RBP	12.8	□□□□□ -0.36
PABPC4-208	ENST00000461578	REXO2	Q9Y3B8	237 aa	Known RBP	12.8	□□□□□ -0.36
PABPC4-208	ENST00000461578	EPN1	Q9Y6I3	576 aa	Predicted RBP	12.8	□□□□□ -0.36
PABPC4-208	ENST00000461578	TCRBV16S1A1N1	A0A5B0	115 aa		12.79	□□□□□ -0.36
PABPC4-208	ENST00000461578	CTAGE9	A4FU28	777 aa		12.79	□□□□□ -0.36
PABPC4-208	ENST00000461578		A6NNC1	897 aa		12.79	□□□□□ -0.36
PABPC4-208	ENST00000461578		A8MVJ9	347 aa		12.79	□□□□□ -0.36
PABPC4-208	ENST00000461578	BTNL10	A8MVZ5	291 aa		12.79	□□□□□ -0.36
PABPC4-208	ENST00000461578	MIF4GD	A9UHW6	222 aa	Known RBP	12.79	□□□□□ -0.36
PABPC4-208	ENST00000461578	BCKDK	O14874	412 aa		12.79	□□□□□ -0.36
PABPC4-208	ENST00000461578	OR1F1	O43749	312 aa		12.79	□□□□□ -0.36
PABPC4-208	ENST00000461578	PRKN	O60260	465 aa	Predicted RBP	12.79	□□□□□ -0.36
PABPC4-208	ENST00000461578	HNF4A	P41235	474 aa		12.79	□□□□□ -0.36
PABPC4-208	ENST00000461578	NAE1	Q13564	534 aa		12.79	□□□□□ -0.36
PABPC4-208	ENST00000461578	SLC25A35	Q3KQZ1	300 aa		12.79	□□□□□ -0.36
PABPC4-208	ENST00000461578	FBXW10	Q5XX13	1052 aa		12.79	□□□□□ -0.36
PABPC4-208	ENST00000461578	IL20RB	Q6UXL0	311 aa		12.79	□□□□□ -0.36
PABPC4-208	ENST00000461578	CLEC9A	Q6UXN8	241 aa		12.79	□□□□□ -0.36
PABPC4-208	ENST00000461578	SLC22A16	Q86VW1	577 aa		12.79	□□□□□ -0.36
PABPC4-208	ENST00000461578	CILP2	Q8IUL8	1156 aa		12.79	□□□□□ -0.36
PABPC4-208	ENST00000461578	ARMC10	Q8N2F6	343 aa		12.79	□□□□□ -0.36
PABPC4-208	ENST00000461578	RNF214	Q8ND24	703 aa		12.79	□□□□□ -0.36
PABPC4-208	ENST00000461578	B3GNT7	Q8NFL0	401 aa		12.79	□□□□□ -0.36
PABPC4-208	ENST00000461578	OR2M7	Q8NG81	312 aa		12.79	□□□□□ -0.36
PABPC4-208	ENST00000461578	GPR21	Q99679	349 aa		12.79	□□□□□ -0.36
PABPC4-208	ENST00000461578	PCBD2	Q9H0N5	130 aa		12.79	□□□□□ -0.36
PABPC4-208	ENST00000461578	CCDC68	Q9H2F9	335 aa		12.79	□□□□□ -0.36
PABPC4-208	ENST00000461578	ZDHHC11	Q9H8X9	412 aa		12.79	□□□□□ -0.36
PABPC4-208	ENST00000461578	PRDM9	Q9NQV7	894 aa		12.79	□□□□□ -0.36
PABPC4-208	ENST00000461578	EIF2B3	Q9NR50	452 aa	Known RBP	12.79	□□□□□ -0.36
PABPC4-208	ENST00000461578	FBXO6	Q9NRD1	293 aa	Predicted RBP	12.79	□□□□□ -0.36
PABPC4-208	ENST00000461578	PNO1	Q9NRX1	252 aa	Known RBP	12.79	□□□□□ -0.36
PABPC4-208	ENST00000461578	HPF1	Q9NWY4	346 aa		12.79	□□□□□ -0.36
PABPC4-208	ENST00000461578	ZNF223	Q9UK11	482 aa	Predicted RBP	12.79	□□□□□ -0.36
PABPC4-208	ENST00000461578	ADAMTS6	Q9UKP5	1117 aa		12.79	□□□□□ -0.36
PABPC4-208	ENST00000461578	ACAD8	Q9UKU7	415 aa		12.79	□□□□□ -0.36
PABPC4-208	ENST00000461578	SOX13	Q9UN79	622 aa		12.79	□□□□□ -0.36
PABPC4-208	ENST00000461578	MED16	Q9Y2X0	877 aa		12.79	□□□□□ -0.36
PABPC4-208	ENST00000461578	HRNR	Q86YZ3	2850 aa	Predicted RBP	12.79	□□□□□ -0.36
PABPC4-208	ENST00000461578	IGKV3D-11	A0A0A0MRZ8	115 aa		12.78	□□□□□ -0.36
PABPC4-208	ENST00000461578	PSMD12	O00232	456 aa	Predicted RBP	12.78	□□□□□ -0.36
PABPC4-208	ENST00000461578	OR2J2	O76002	312 aa		12.78	□□□□□ -0.36
PABPC4-208	ENST00000461578	IPO7	O95373	1038 aa	Known RBP	12.78	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 41 ms