RNA–Protein interactions for RNA: ENST00000461525.5

COL1A2-202, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL1A2, Length 776 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-202ENST00000461525 MAN1A2O60476 641 aa16.6■□□□□ 0.25
COL1A2-202ENST00000461525 H2AFYO75367 372 aaKnown RBP16.6■□□□□ 0.25
COL1A2-202ENST00000461525 C1GALT1C1LP0DN25 315 aa16.6■□□□□ 0.25
COL1A2-202ENST00000461525 NCF1P14598 390 aaPredicted RBP16.6■□□□□ 0.25
COL1A2-202ENST00000461525 CD46P15529 392 aa16.6■□□□□ 0.25
COL1A2-202ENST00000461525 GDF5P43026 501 aa16.6■□□□□ 0.25
COL1A2-202ENST00000461525 SLC6A12P48065 614 aa16.6■□□□□ 0.25
COL1A2-202ENST00000461525 ST13P50502 369 aaKnown RBP16.6■□□□□ 0.25
COL1A2-202ENST00000461525 STXBP1P61764 594 aaKnown RBP16.6■□□□□ 0.25
COL1A2-202ENST00000461525 BTG2P78543 158 aa16.6■□□□□ 0.25
COL1A2-202ENST00000461525 POU4F1Q01851 419 aa16.6■□□□□ 0.25
COL1A2-202ENST00000461525 RBPJQ06330 500 aa16.6■□□□□ 0.25
COL1A2-202ENST00000461525 SLBPQ14493 270 aaKnown RBP eCLIP16.6■□□□□ 0.25
COL1A2-202ENST00000461525 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.6■□□□□ 0.25
COL1A2-202ENST00000461525 C18orf21Q32NC0 220 aaPredicted RBP16.6■□□□□ 0.25
COL1A2-202ENST00000461525 SLCO4C1Q6ZQN7 724 aa16.6■□□□□ 0.25
COL1A2-202ENST00000461525 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.6■□□□□ 0.25
COL1A2-202ENST00000461525 KLHDC8AQ8IYD2 350 aa16.6■□□□□ 0.25
COL1A2-202ENST00000461525 HORMAD2Q8N7B1 307 aa16.6■□□□□ 0.25
COL1A2-202ENST00000461525 TMEM178AQ8NBL3 297 aa16.6■□□□□ 0.25
COL1A2-202ENST00000461525 ARMC2Q8NEN0 867 aa16.6■□□□□ 0.25
COL1A2-202ENST00000461525 TTLQ8NG68 377 aa16.6■□□□□ 0.25
COL1A2-202ENST00000461525 ELP5Q8TE02 316 aa16.6■□□□□ 0.25
COL1A2-202ENST00000461525 CREB3L4Q8TEY5 395 aa16.6■□□□□ 0.25
COL1A2-202ENST00000461525 ERP44Q9BS26 406 aa16.6■□□□□ 0.25
COL1A2-202ENST00000461525 UNKQ9C0B0 810 aaKnown RBP16.6■□□□□ 0.25
COL1A2-202ENST00000461525 DERL2Q9GZP9 239 aa16.6■□□□□ 0.25
COL1A2-202ENST00000461525 SAYSD1Q9NPB0 183 aa16.6■□□□□ 0.25
COL1A2-202ENST00000461525 PRDM9Q9NQV7 894 aa16.6■□□□□ 0.25
COL1A2-202ENST00000461525 SUCOQ9UBS9 1254 aaKnown RBP16.6■□□□□ 0.25
COL1A2-202ENST00000461525 MTO1Q9Y2Z2 717 aaKnown RBP16.6■□□□□ 0.25
COL1A2-202ENST00000461525 DIDO1Q9BTC0 2240 aaKnown RBP16.6■□□□□ 0.25
COL1A2-202ENST00000461525 SAGE2PA6NJ88 616 aa16.59■□□□□ 0.25
COL1A2-202ENST00000461525 C4orf51C9J302 202 aa16.59■□□□□ 0.25
COL1A2-202ENST00000461525 FANCGO15287 622 aa16.59■□□□□ 0.25
COL1A2-202ENST00000461525 SMIM10L1P0DMW3 83 aa16.59■□□□□ 0.25
COL1A2-202ENST00000461525 MAOAP21397 527 aa16.59■□□□□ 0.25
COL1A2-202ENST00000461525 EEF1DP29692 281 aaKnown RBP16.59■□□□□ 0.25
COL1A2-202ENST00000461525 SSTR1P30872 391 aa16.59■□□□□ 0.25
COL1A2-202ENST00000461525 TGFBIQ15582 683 aa16.59■□□□□ 0.25
COL1A2-202ENST00000461525 SPINK14Q6IE38 97 aa16.59■□□□□ 0.25
COL1A2-202ENST00000461525 TMIGD1Q6UXZ0 262 aa16.59■□□□□ 0.25
COL1A2-202ENST00000461525 MAATS1Q7Z4T9 603 aa16.59■□□□□ 0.25
COL1A2-202ENST00000461525 RPS19BP1Q86WX3 136 aaKnown RBP16.59■□□□□ 0.25
COL1A2-202ENST00000461525 KRT78Q8N1N4 520 aa16.59■□□□□ 0.25
COL1A2-202ENST00000461525 CA13Q8N1Q1 262 aa16.59■□□□□ 0.25
COL1A2-202ENST00000461525 TCAIMQ8N3R3 496 aa16.59■□□□□ 0.25
COL1A2-202ENST00000461525 SPATA6LQ8N4H0 392 aa16.59■□□□□ 0.25
COL1A2-202ENST00000461525 KIF2BQ8N4N8 673 aa16.59■□□□□ 0.25
COL1A2-202ENST00000461525 CCT6BQ92526 530 aa16.59■□□□□ 0.25
COL1A2-202ENST00000461525 GAL3ST3Q96A11 431 aa16.59■□□□□ 0.25
COL1A2-202ENST00000461525 SCMH1Q96GD3 660 aa16.59■□□□□ 0.25
COL1A2-202ENST00000461525 SMIM10Q96HG1 83 aa16.59■□□□□ 0.25
COL1A2-202ENST00000461525 PDLIM2Q96JY6 352 aa16.59■□□□□ 0.25
COL1A2-202ENST00000461525 FAR2Q96K12 515 aa16.59■□□□□ 0.25
COL1A2-202ENST00000461525 CAPS2Q9BXY5 557 aa16.59■□□□□ 0.25
COL1A2-202ENST00000461525 HES7Q9BYE0 225 aa16.59■□□□□ 0.25
COL1A2-202ENST00000461525 CDCP1Q9H5V8 836 aa16.59■□□□□ 0.25
COL1A2-202ENST00000461525 CAB39LQ9H9S4 337 aa16.59■□□□□ 0.25
COL1A2-202ENST00000461525 WWOXQ9NZC7 414 aa16.59■□□□□ 0.25
COL1A2-202ENST00000461525 WHRNQ9P202 907 aa16.59■□□□□ 0.25
COL1A2-202ENST00000461525 IGKV3D-11A0A0A0MRZ8 115 aa16.58■□□□□ 0.24
COL1A2-202ENST00000461525 TCRBV16S1A1N1A0A5B0 115 aa16.58■□□□□ 0.24
COL1A2-202ENST00000461525 FAM227AF5H4B4 570 aa16.58■□□□□ 0.24
COL1A2-202ENST00000461525 EIF3HO15372 352 aaKnown RBP eCLIP16.58■□□□□ 0.24
COL1A2-202ENST00000461525 PHGDHO43175 533 aaKnown RBP16.58■□□□□ 0.24
COL1A2-202ENST00000461525 MLYCDO95822 493 aa16.58■□□□□ 0.24
COL1A2-202ENST00000461525 GSTM2P28161 218 aa16.58■□□□□ 0.24
COL1A2-202ENST00000461525 BTN3A2P78410 334 aa16.58■□□□□ 0.24
COL1A2-202ENST00000461525 GPSM1Q86YR5 675 aa16.58■□□□□ 0.24
COL1A2-202ENST00000461525 SLC34A3Q8N130 599 aa16.58■□□□□ 0.24
COL1A2-202ENST00000461525 SPATA4Q8NEY3 305 aa16.58■□□□□ 0.24
COL1A2-202ENST00000461525 CPNE1Q99829 537 aa16.58■□□□□ 0.24
COL1A2-202ENST00000461525 AICDAQ9GZX7 198 aa16.58■□□□□ 0.24
COL1A2-202ENST00000461525 CNOT10Q9H9A5 744 aaKnown RBP16.58■□□□□ 0.24
COL1A2-202ENST00000461525 GPRC5BQ9NZH0 403 aa16.58■□□□□ 0.24
COL1A2-202ENST00000461525 LRFN1Q9P244 771 aa16.58■□□□□ 0.24
COL1A2-202ENST00000461525 COPG2Q9UBF2 871 aa16.58■□□□□ 0.24
COL1A2-202ENST00000461525 SH3BGRL2Q9UJC5 107 aa16.58■□□□□ 0.24
COL1A2-202ENST00000461525 SCN3AQ9NY46 2000 aa16.57■□□□□ 0.24
COL1A2-202ENST00000461525 CPAMD8Q8IZJ3 1885 aa16.57■□□□□ 0.24
COL1A2-202ENST00000461525 A0A088AWK7 358 aa16.57■□□□□ 0.24
COL1A2-202ENST00000461525 A0A0G2JN53 185 aa16.57■□□□□ 0.24
COL1A2-202ENST00000461525 TCRBV9S1A1TA0A576 114 aa16.57■□□□□ 0.24
COL1A2-202ENST00000461525 CXorf49A8MYA2 514 aaPredicted RBP16.57■□□□□ 0.24
COL1A2-202ENST00000461525 CCL21O00585 134 aa16.57■□□□□ 0.24
COL1A2-202ENST00000461525 CDK2AP1O14519 115 aa16.57■□□□□ 0.24
COL1A2-202ENST00000461525 ERI3O43414 337 aaKnown RBP16.57■□□□□ 0.24
COL1A2-202ENST00000461525 RAD51CO43502 376 aa16.57■□□□□ 0.24
COL1A2-202ENST00000461525 WISP3O95389 354 aaPredicted RBP16.57■□□□□ 0.24
COL1A2-202ENST00000461525 CCDC166P0CW27 439 aa16.57■□□□□ 0.24
COL1A2-202ENST00000461525 STMN1P16949 149 aa16.57■□□□□ 0.24
COL1A2-202ENST00000461525 ZNF10P21506 573 aaPredicted RBP16.57■□□□□ 0.24
COL1A2-202ENST00000461525 GP5P40197 560 aa16.57■□□□□ 0.24
COL1A2-202ENST00000461525 CA7P43166 264 aa16.57■□□□□ 0.24
COL1A2-202ENST00000461525 CASP6P55212 293 aa16.57■□□□□ 0.24
COL1A2-202ENST00000461525 ATP6V0D1P61421 351 aa16.57■□□□□ 0.24
COL1A2-202ENST00000461525 ALDH6A1Q02252 535 aaKnown RBP16.57■□□□□ 0.24
COL1A2-202ENST00000461525 SLC25A25Q6KCM7 469 aa16.57■□□□□ 0.24
COL1A2-202ENST00000461525 MTFR2Q6P444 385 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms