RNA–Protein interactions for RNA: ENST00000460770.1

SYPL1-203, Transcript of synaptophysin like 1, humanhuman

TSL 1 (best)

Gene SYPL1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-203ENST00000460770 HIPK1Q86Z02 1210 aa1.89□□□□□ -2.11
SYPL1-203ENST00000460770 HSCBQ8IWL3 235 aa1.89□□□□□ -2.11
SYPL1-203ENST00000460770 ZC3H3Q8IXZ2 948 aaKnown RBP1.89□□□□□ -2.11
SYPL1-203ENST00000460770 TMCO5AQ8N6Q1 288 aa1.89□□□□□ -2.11
SYPL1-203ENST00000460770 GBP7Q8N8V2 638 aaPredicted RBP1.89□□□□□ -2.11
SYPL1-203ENST00000460770 RASGEF1AQ8N9B8 481 aa1.89□□□□□ -2.11
SYPL1-203ENST00000460770 OR4C15Q8NGM1 316 aa1.89□□□□□ -2.11
SYPL1-203ENST00000460770 KIF18AQ8NI77 898 aa1.89□□□□□ -2.11
SYPL1-203ENST00000460770 KCNE4Q8WWG9 221 aa1.89□□□□□ -2.11
SYPL1-203ENST00000460770 ZNF622Q969S3 477 aaKnown RBP eCLIP1.89□□□□□ -2.11
SYPL1-203ENST00000460770 NXNL1Q96CM4 212 aa1.89□□□□□ -2.11
SYPL1-203ENST00000460770 DGAT2Q96PD7 388 aa1.89□□□□□ -2.11
SYPL1-203ENST00000460770 IL12RB2Q99665 862 aa1.89□□□□□ -2.11
SYPL1-203ENST00000460770 CCDC3Q9BQI4 270 aa1.89□□□□□ -2.11
SYPL1-203ENST00000460770 THUMPD3Q9BV44 507 aaKnown RBP1.89□□□□□ -2.11
SYPL1-203ENST00000460770 MRPL9Q9BYD2 267 aaKnown RBP1.89□□□□□ -2.11
SYPL1-203ENST00000460770 SDCBP2Q9H190 292 aa1.89□□□□□ -2.11
SYPL1-203ENST00000460770 EGLN3Q9H6Z9 239 aa1.89□□□□□ -2.11
SYPL1-203ENST00000460770 PFDN4Q9NQP4 134 aa1.89□□□□□ -2.11
SYPL1-203ENST00000460770 CWC25Q9NXE8 425 aaPredicted RBP1.89□□□□□ -2.11
SYPL1-203ENST00000460770 TXNDC16Q9P2K2 825 aa1.89□□□□□ -2.11
SYPL1-203ENST00000460770 WDR35Q9P2L0 1181 aa1.89□□□□□ -2.11
SYPL1-203ENST00000460770 MTRRQ9UBK8 725 aa1.89□□□□□ -2.11
SYPL1-203ENST00000460770 CCL27Q9Y4X3 112 aa1.89□□□□□ -2.11
SYPL1-203ENST00000460770 POMT1Q9Y6A1 747 aa1.89□□□□□ -2.11
SYPL1-203ENST00000460770 TRAV24A0A0B4J272 114 aa1.88□□□□□ -2.11
SYPL1-203ENST00000460770 TRAV34A0A0B4J273 112 aa1.88□□□□□ -2.11
SYPL1-203ENST00000460770 A0A1W2PPQ1 181 aa1.88□□□□□ -2.11
SYPL1-203ENST00000460770 TRBC2A0A5B9 178 aa1.88□□□□□ -2.11
SYPL1-203ENST00000460770 INPP4BO15327 924 aa1.88□□□□□ -2.11
SYPL1-203ENST00000460770 CCDC175P0C221 793 aa1.88□□□□□ -2.11
SYPL1-203ENST00000460770 IFNAR1P17181 557 aa1.88□□□□□ -2.11
SYPL1-203ENST00000460770 EDNRAP25101 427 aa1.88□□□□□ -2.11
SYPL1-203ENST00000460770 MPZP25189 248 aa1.88□□□□□ -2.11
SYPL1-203ENST00000460770 GIFP27352 417 aa1.88□□□□□ -2.11
SYPL1-203ENST00000460770 MC5RP33032 325 aa1.88□□□□□ -2.11
SYPL1-203ENST00000460770 SFTPDP35247 375 aa1.88□□□□□ -2.11
SYPL1-203ENST00000460770 GP5P40197 560 aa1.88□□□□□ -2.11
SYPL1-203ENST00000460770 MATKP42679 507 aa1.88□□□□□ -2.11
SYPL1-203ENST00000460770 LHX1P48742 406 aa1.88□□□□□ -2.11
SYPL1-203ENST00000460770 UBXN1Q04323 297 aa1.88□□□□□ -2.11
SYPL1-203ENST00000460770 TFCP2Q12800 502 aa1.88□□□□□ -2.11
SYPL1-203ENST00000460770 IL11RAQ14626 422 aa1.88□□□□□ -2.11
SYPL1-203ENST00000460770 SIX1Q15475 284 aaPredicted RBP1.88□□□□□ -2.11
SYPL1-203ENST00000460770 ZNF674Q2M3X9 581 aa1.88□□□□□ -2.11
SYPL1-203ENST00000460770 ODF2Q5BJF6 829 aa1.88□□□□□ -2.11
SYPL1-203ENST00000460770 ZRANB3Q5FWF4 1079 aa1.88□□□□□ -2.11
SYPL1-203ENST00000460770 ZNF506Q5JVG8 444 aa1.88□□□□□ -2.11
SYPL1-203ENST00000460770 SLC10A5Q5PT55 438 aa1.88□□□□□ -2.11
SYPL1-203ENST00000460770 CAVIN1Q6NZI2 390 aaKnown RBP1.88□□□□□ -2.11
SYPL1-203ENST00000460770 EMBQ6PCB8 327 aa1.88□□□□□ -2.11
SYPL1-203ENST00000460770 MACC1Q6ZN28 852 aa1.88□□□□□ -2.11
SYPL1-203ENST00000460770 DET1Q7L5Y6 550 aa1.88□□□□□ -2.11
SYPL1-203ENST00000460770 CCDC60Q8IWA6 550 aaPredicted RBP1.88□□□□□ -2.11
SYPL1-203ENST00000460770 CNPY4Q8N129 248 aa1.88□□□□□ -2.11
SYPL1-203ENST00000460770 CARNMT1Q8N4J0 409 aa1.88□□□□□ -2.11
SYPL1-203ENST00000460770 MINDY1Q8N5J2 469 aa1.88□□□□□ -2.11
SYPL1-203ENST00000460770 OR4Q3Q8NH05 313 aa1.88□□□□□ -2.11
SYPL1-203ENST00000460770 GDAP1Q8TB36 358 aa1.88□□□□□ -2.11
SYPL1-203ENST00000460770 SETD6Q8TBK2 473 aa1.88□□□□□ -2.11
SYPL1-203ENST00000460770 KIAA1524Q8TCG1 905 aa1.88□□□□□ -2.11
SYPL1-203ENST00000460770 DEPDC1BQ8WUY9 529 aa1.88□□□□□ -2.11
SYPL1-203ENST00000460770 PTERQ96BW5 349 aa1.88□□□□□ -2.11
SYPL1-203ENST00000460770 TMCO6Q96DC7 493 aa1.88□□□□□ -2.11
SYPL1-203ENST00000460770 CDHR1Q96JP9 859 aa1.88□□□□□ -2.11
SYPL1-203ENST00000460770 FER1L6-AS2Q96M78 137 aa1.88□□□□□ -2.11
SYPL1-203ENST00000460770 RAB3IPQ96QF0 476 aaPredicted RBP1.88□□□□□ -2.11
SYPL1-203ENST00000460770 CITED2Q99967 270 aaPredicted RBP1.88□□□□□ -2.11
SYPL1-203ENST00000460770 NAA11Q9BSU3 229 aaPredicted RBP1.88□□□□□ -2.11
SYPL1-203ENST00000460770 FAM129AQ9BZQ8 928 aa1.88□□□□□ -2.11
SYPL1-203ENST00000460770 DNAI2Q9GZS0 605 aa1.88□□□□□ -2.11
SYPL1-203ENST00000460770 C2orf40Q9H1Z8 148 aa1.88□□□□□ -2.11
SYPL1-203ENST00000460770 RNF121Q9H920 327 aa1.88□□□□□ -2.11
SYPL1-203ENST00000460770 PIH1D3Q9NQM4 214 aaKnown RBP1.88□□□□□ -2.11
SYPL1-203ENST00000460770 POLLQ9UGP5 575 aa1.88□□□□□ -2.11
SYPL1-203ENST00000460770 POGZQ7Z3K3 1410 aa1.88□□□□□ -2.11
SYPL1-203ENST00000460770 TRGV8A0A0C4DH27 118 aa1.87□□□□□ -2.11
SYPL1-203ENST00000460770 IGHV3-16A0A0C4DH30 117 aa1.87□□□□□ -2.11
SYPL1-203ENST00000460770 A0A0U1RQK1 487 aa1.87□□□□□ -2.11
SYPL1-203ENST00000460770 ZNF320A2RRD8 509 aa1.87□□□□□ -2.11
SYPL1-203ENST00000460770 TCP10L2B9ZVM9 353 aa1.87□□□□□ -2.11
SYPL1-203ENST00000460770 ADAMDEC1O15204 470 aa1.87□□□□□ -2.11
SYPL1-203ENST00000460770 TNFSF12O43508 249 aa1.87□□□□□ -2.11
SYPL1-203ENST00000460770 TADA2AO75478 443 aa1.87□□□□□ -2.11
SYPL1-203ENST00000460770 PRDM1O75626 825 aa1.87□□□□□ -2.11
SYPL1-203ENST00000460770 TOMM70O94826 608 aa1.87□□□□□ -2.11
SYPL1-203ENST00000460770 KRT6AP02538 564 aa1.87□□□□□ -2.11
SYPL1-203ENST00000460770 KRT6BP04259 564 aa1.87□□□□□ -2.11
SYPL1-203ENST00000460770 EPCAMP16422 314 aa1.87□□□□□ -2.11
SYPL1-203ENST00000460770 PTAFRP25105 342 aa1.87□□□□□ -2.11
SYPL1-203ENST00000460770 PRKCIP41743 596 aa1.87□□□□□ -2.11
SYPL1-203ENST00000460770 KRT6CP48668 564 aa1.87□□□□□ -2.11
SYPL1-203ENST00000460770 NPY4RP50391 375 aa1.87□□□□□ -2.11
SYPL1-203ENST00000460770 CSE1LP55060 971 aaKnown RBP1.87□□□□□ -2.11
SYPL1-203ENST00000460770 AP1B1Q10567 949 aa1.87□□□□□ -2.11
SYPL1-203ENST00000460770 ALCAMQ13740 583 aa1.87□□□□□ -2.11
SYPL1-203ENST00000460770 SNTB1Q13884 538 aaKnown RBP1.87□□□□□ -2.11
SYPL1-203ENST00000460770 BAATQ14032 418 aaPredicted RBP1.87□□□□□ -2.11
SYPL1-203ENST00000460770 NFE2L1Q14494 772 aa1.87□□□□□ -2.11
SYPL1-203ENST00000460770 SLMAPQ14BN4 828 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms