RNA–Protein interactions for RNA: ENST00000458748.1

SCARNA2-201, small Cajal body-specific RNA 2, humanhuman

BASIC

Gene SCARNA2, Length 420 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA2-201ENST00000458748 EPB42P16452 691 aa16.53■□□□□ 0.24
SCARNA2-201ENST00000458748 HNF4AP41235 474 aa16.53■□□□□ 0.24
SCARNA2-201ENST00000458748 ACTN3Q08043 901 aaPredicted RBP16.53■□□□□ 0.24
SCARNA2-201ENST00000458748 MFAP5Q13361 173 aa16.53■□□□□ 0.24
SCARNA2-201ENST00000458748 RCN2Q14257 317 aa16.53■□□□□ 0.24
SCARNA2-201ENST00000458748 TLR1Q15399 786 aa16.53■□□□□ 0.24
SCARNA2-201ENST00000458748 NSDHLQ15738 373 aa16.53■□□□□ 0.24
SCARNA2-201ENST00000458748 TBCCQ15814 346 aa16.53■□□□□ 0.24
SCARNA2-201ENST00000458748 EXT1Q16394 746 aa16.53■□□□□ 0.24
SCARNA2-201ENST00000458748 TOR1AIP1Q5JTV8 583 aa16.53■□□□□ 0.24
SCARNA2-201ENST00000458748 CLEC18BQ6UXF7 455 aa16.53■□□□□ 0.24
SCARNA2-201ENST00000458748 Q6ZS92 163 aa16.53■□□□□ 0.24
SCARNA2-201ENST00000458748 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.53■□□□□ 0.24not detected■□□□□ 8.4
SCARNA2-201ENST00000458748 CLEC18CQ8NCF0 446 aa16.53■□□□□ 0.24
SCARNA2-201ENST00000458748 PLPP5Q8NEB5 264 aa16.53■□□□□ 0.24
SCARNA2-201ENST00000458748 ARMC2Q8NEN0 867 aa16.53■□□□□ 0.24
SCARNA2-201ENST00000458748 DNAJB14Q8TBM8 379 aa16.53■□□□□ 0.24
SCARNA2-201ENST00000458748 ADAMTS18Q8TE60 1221 aa16.53■□□□□ 0.24
SCARNA2-201ENST00000458748 CREB3L4Q8TEY5 395 aa16.53■□□□□ 0.24
SCARNA2-201ENST00000458748 KCTD4Q8WVF5 259 aa16.53■□□□□ 0.24
SCARNA2-201ENST00000458748 SLC44A1Q8WWI5 657 aa16.53■□□□□ 0.24
SCARNA2-201ENST00000458748 NXNL1Q96CM4 212 aa16.53■□□□□ 0.24
SCARNA2-201ENST00000458748 WDR34Q96EX3 536 aa16.53■□□□□ 0.24
SCARNA2-201ENST00000458748 ATOH8Q96SQ7 321 aa16.53■□□□□ 0.24
SCARNA2-201ENST00000458748 IGSF5Q9NSI5 407 aa16.53■□□□□ 0.24
SCARNA2-201ENST00000458748 TMCO1Q9UM00 188 aa16.53■□□□□ 0.24
SCARNA2-201ENST00000458748 SCN3AQ9NY46 2000 aa16.52■□□□□ 0.24
SCARNA2-201ENST00000458748 K7EPI3 171 aa16.52■□□□□ 0.24
SCARNA2-201ENST00000458748 JRKO75564 520 aa16.52■□□□□ 0.24
SCARNA2-201ENST00000458748 GFAPP14136 432 aa16.52■□□□□ 0.24
SCARNA2-201ENST00000458748 SERPINB1P30740 379 aa16.52■□□□□ 0.24
SCARNA2-201ENST00000458748 PIK3CGP48736 1102 aa16.52■□□□□ 0.24
SCARNA2-201ENST00000458748 RAB8AP61006 207 aa16.52■□□□□ 0.24
SCARNA2-201ENST00000458748 ARG2P78540 354 aa16.52■□□□□ 0.24
SCARNA2-201ENST00000458748 Q0VFX4 171 aa16.52■□□□□ 0.24
SCARNA2-201ENST00000458748 CHIT1Q13231 466 aa16.52■□□□□ 0.24
SCARNA2-201ENST00000458748 ABRAXAS2Q15018 415 aa16.52■□□□□ 0.24
SCARNA2-201ENST00000458748 PCOLCEQ15113 449 aa16.52■□□□□ 0.24
SCARNA2-201ENST00000458748 TRIM40Q6P9F5 258 aa16.52■□□□□ 0.24
SCARNA2-201ENST00000458748 TRMT10CQ7L0Y3 403 aaKnown RBP16.52■□□□□ 0.24
SCARNA2-201ENST00000458748 SRFBP1Q8NEF9 429 aaKnown RBP16.52■□□□□ 0.24
SCARNA2-201ENST00000458748 UBTD2Q8WUN7 234 aa16.52■□□□□ 0.24
SCARNA2-201ENST00000458748 PAFAH2Q99487 392 aa16.52■□□□□ 0.24
SCARNA2-201ENST00000458748 LPAR4Q99677 370 aa16.52■□□□□ 0.24
SCARNA2-201ENST00000458748 NPLQ9BXD5 320 aaPredicted RBP16.52■□□□□ 0.24
SCARNA2-201ENST00000458748 ROGDIQ9GZN7 287 aa16.52■□□□□ 0.24
SCARNA2-201ENST00000458748 VPS11Q9H270 941 aa16.52■□□□□ 0.24
SCARNA2-201ENST00000458748 PTGFRNQ9P2B2 879 aa16.52■□□□□ 0.24
SCARNA2-201ENST00000458748 ZNF180Q9UJW8 692 aa16.52■□□□□ 0.24
SCARNA2-201ENST00000458748 TNPO3Q9Y5L0 923 aaKnown RBP16.52■□□□□ 0.24
SCARNA2-201ENST00000458748 SYNDIG1LA6NDD5 238 aa16.51■□□□□ 0.23
SCARNA2-201ENST00000458748 UBXN8O00124 270 aa16.51■□□□□ 0.23
SCARNA2-201ENST00000458748 ERI3O43414 337 aaKnown RBP16.51■□□□□ 0.23
SCARNA2-201ENST00000458748 PRMT3O60678 531 aa16.51■□□□□ 0.23
SCARNA2-201ENST00000458748 RBP1P09455 135 aa16.51■□□□□ 0.23
SCARNA2-201ENST00000458748 COL6A2P12110 1019 aa16.51■□□□□ 0.23
SCARNA2-201ENST00000458748 CASP2P42575 452 aa16.51■□□□□ 0.23
SCARNA2-201ENST00000458748 ALDH18A1P54886 795 aaKnown RBP16.51■□□□□ 0.23
SCARNA2-201ENST00000458748 BTN3A2P78410 334 aa16.51■□□□□ 0.23
SCARNA2-201ENST00000458748 DLG1Q12959 904 aa16.51■□□□□ 0.23
SCARNA2-201ENST00000458748 DOC2AQ14183 400 aa16.51■□□□□ 0.23
SCARNA2-201ENST00000458748 TSNAXIP1Q2TAA8 658 aa16.51■□□□□ 0.23
SCARNA2-201ENST00000458748 B3GNTL1Q67FW5 361 aaPredicted RBP16.51■□□□□ 0.23
SCARNA2-201ENST00000458748 PLAG1Q6DJT9 500 aa16.51■□□□□ 0.23
SCARNA2-201ENST00000458748 METTL2BQ6P1Q9 378 aaKnown RBP16.51■□□□□ 0.23
SCARNA2-201ENST00000458748 LINC00696Q6ZRV3 163 aa16.51■□□□□ 0.23
SCARNA2-201ENST00000458748 ANKRD37Q7Z713 158 aa16.51■□□□□ 0.23
SCARNA2-201ENST00000458748 CENPLQ8N0S6 344 aaPredicted RBP16.51■□□□□ 0.23
SCARNA2-201ENST00000458748 FAM26EQ8N5C1 309 aa16.51■□□□□ 0.23
SCARNA2-201ENST00000458748 OR2L5Q8NG80 312 aa16.51■□□□□ 0.23
SCARNA2-201ENST00000458748 OR5T3Q8NGG3 340 aa16.51■□□□□ 0.23
SCARNA2-201ENST00000458748 BRIX1Q8TDN6 353 aaKnown RBP16.51■□□□□ 0.23
SCARNA2-201ENST00000458748 ESAMQ96AP7 390 aa16.51■□□□□ 0.23
SCARNA2-201ENST00000458748 CNDP1Q96KN2 507 aa16.51■□□□□ 0.23
SCARNA2-201ENST00000458748 IMMP1LQ96LU5 166 aa16.51■□□□□ 0.23
SCARNA2-201ENST00000458748 REXO4Q9GZR2 422 aaKnown RBP16.51■□□□□ 0.23
SCARNA2-201ENST00000458748 RHBGQ9H310 441 aa16.51■□□□□ 0.23
SCARNA2-201ENST00000458748 COPS7BQ9H9Q2 264 aaPredicted RBP16.51■□□□□ 0.23
SCARNA2-201ENST00000458748 ZBTB20Q9HC78 741 aaPredicted RBP16.51■□□□□ 0.23
SCARNA2-201ENST00000458748 AGPAT4Q9NRZ5 378 aa16.51■□□□□ 0.23
SCARNA2-201ENST00000458748 LUZP4Q9P127 313 aa16.51■□□□□ 0.23
SCARNA2-201ENST00000458748 ADGRE2Q9UHX3 823 aa16.51■□□□□ 0.23
SCARNA2-201ENST00000458748 NFU1Q9UMS0 254 aa16.51■□□□□ 0.23
SCARNA2-201ENST00000458748 MRPS33Q9Y291 106 aaKnown RBP16.51■□□□□ 0.23
SCARNA2-201ENST00000458748 EXOC1LA0A1B0GW35 172 aa16.5■□□□□ 0.23
SCARNA2-201ENST00000458748 LRIT2A6NDA9 550 aa16.5■□□□□ 0.23
SCARNA2-201ENST00000458748 POC1B-GALNT4F8VUJ3 575 aa16.5■□□□□ 0.23
SCARNA2-201ENST00000458748 B3GALT2O43825 422 aa16.5■□□□□ 0.23
SCARNA2-201ENST00000458748 CDC123O75794 336 aaPredicted RBP16.5■□□□□ 0.23
SCARNA2-201ENST00000458748 ALDOAP04075 364 aaKnown RBP16.5■□□□□ 0.23
SCARNA2-201ENST00000458748 ABHD2P08910 425 aa16.5■□□□□ 0.23
SCARNA2-201ENST00000458748 SMIM10L1P0DMW3 83 aa16.5■□□□□ 0.23
SCARNA2-201ENST00000458748 ECHS1P30084 290 aa16.5■□□□□ 0.23
SCARNA2-201ENST00000458748 UQCRFS1P47985 274 aa16.5■□□□□ 0.23
SCARNA2-201ENST00000458748 GLRBP48167 497 aa16.5■□□□□ 0.23
SCARNA2-201ENST00000458748 KCNC1P48547 511 aa16.5■□□□□ 0.23
SCARNA2-201ENST00000458748 OR4D2P58180 307 aa16.5■□□□□ 0.23
SCARNA2-201ENST00000458748 SNRPNP63162 240 aaKnown RBP16.5■□□□□ 0.23
SCARNA2-201ENST00000458748 OLR1P78380 273 aa16.5■□□□□ 0.23
SCARNA2-201ENST00000458748 PHEXP78562 749 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms