RNA–Protein interactions for RNA: ENST00000456563.1

FAM239A-203, Transcript of family with sequence similarity 239 member A, humanhuman

TSL 3

Gene FAM239A, Length 793 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM239A-203ENST00000456563 ZNF75CPQ92670 426 aaPredicted RBP16.96■□□□□ 0.31
FAM239A-203ENST00000456563 MR1Q95460 341 aa16.96■□□□□ 0.31
FAM239A-203ENST00000456563 SORT1Q99523 831 aa16.96■□□□□ 0.31
FAM239A-203ENST00000456563 SERPINI1Q99574 410 aa16.96■□□□□ 0.31
FAM239A-203ENST00000456563 CENPKQ9BS16 269 aa16.96■□□□□ 0.31
FAM239A-203ENST00000456563 OR51B5Q9H339 312 aa16.96■□□□□ 0.31
FAM239A-203ENST00000456563 ZNF395Q9H8N7 513 aaPredicted RBP16.96■□□□□ 0.31
FAM239A-203ENST00000456563 AKIRIN1Q9H9L7 192 aaPredicted RBP16.96■□□□□ 0.31
FAM239A-203ENST00000456563 ZNF304Q9HCX3 659 aa16.96■□□□□ 0.31
FAM239A-203ENST00000456563 PRM3Q9NNZ6 103 aa16.96■□□□□ 0.31
FAM239A-203ENST00000456563 THAP1Q9NVV9 213 aa16.96■□□□□ 0.31
FAM239A-203ENST00000456563 ZDHHC2Q9UIJ5 367 aa16.96■□□□□ 0.31
FAM239A-203ENST00000456563 HAO1Q9UJM8 370 aa16.96■□□□□ 0.31
FAM239A-203ENST00000456563 RAP2CQ9Y3L5 183 aa16.96■□□□□ 0.31
FAM239A-203ENST00000456563 SDK2Q58EX2 2172 aa16.96■□□□□ 0.31
FAM239A-203ENST00000456563 NCOR2Q9Y618 2525 aa16.95■□□□□ 0.3
FAM239A-203ENST00000456563 C1QTNF9BB2RNN3 333 aa16.95■□□□□ 0.3
FAM239A-203ENST00000456563 KLHL18O94889 574 aa16.95■□□□□ 0.3
FAM239A-203ENST00000456563 SEMA3DO95025 777 aa16.95■□□□□ 0.3
FAM239A-203ENST00000456563 ETHE1O95571 254 aa16.95■□□□□ 0.3
FAM239A-203ENST00000456563 C1QTNF9P0C862 333 aa16.95■□□□□ 0.3
FAM239A-203ENST00000456563 SERPINB3P29508 390 aa16.95■□□□□ 0.3
FAM239A-203ENST00000456563 STAT5AP42229 794 aa16.95■□□□□ 0.3
FAM239A-203ENST00000456563 RAB8AP61006 207 aa16.95■□□□□ 0.3
FAM239A-203ENST00000456563 SKP1P63208 163 aa16.95■□□□□ 0.3
FAM239A-203ENST00000456563 ABRAXAS2Q15018 415 aa16.95■□□□□ 0.3
FAM239A-203ENST00000456563 UGT3A2Q3SY77 523 aa16.95■□□□□ 0.3
FAM239A-203ENST00000456563 DEFB134Q4QY38 66 aa16.95■□□□□ 0.3
FAM239A-203ENST00000456563 SH2D4BQ5SQS7 431 aa16.95■□□□□ 0.3
FAM239A-203ENST00000456563 LCN10Q6JVE6 187 aa16.95■□□□□ 0.3
FAM239A-203ENST00000456563 PRSS41Q7RTY9 318 aa16.95■□□□□ 0.3
FAM239A-203ENST00000456563 UBE3DQ7Z6J8 389 aa16.95■□□□□ 0.3
FAM239A-203ENST00000456563 PDSS2Q86YH6 399 aa16.95■□□□□ 0.3
FAM239A-203ENST00000456563 GBP7Q8N8V2 638 aaPredicted RBP16.95■□□□□ 0.3
FAM239A-203ENST00000456563 ZNF248Q8NDW4 579 aa16.95■□□□□ 0.3
FAM239A-203ENST00000456563 DYDC1Q8WWB3 177 aa16.95■□□□□ 0.3
FAM239A-203ENST00000456563 RGMAQ96B86 450 aa16.95■□□□□ 0.3
FAM239A-203ENST00000456563 MMABQ96EY8 250 aaPredicted RBP16.95■□□□□ 0.3
FAM239A-203ENST00000456563 KCNC2Q96PR1 638 aa16.95■□□□□ 0.3
FAM239A-203ENST00000456563 C17orf62Q9BQA9 187 aa16.95■□□□□ 0.3
FAM239A-203ENST00000456563 ILKAPQ9H0C8 392 aaPredicted RBP16.95■□□□□ 0.3
FAM239A-203ENST00000456563 CHST8Q9H2A9 424 aa16.95■□□□□ 0.3
FAM239A-203ENST00000456563 CLK4Q9HAZ1 481 aaKnown RBP16.95■□□□□ 0.3
FAM239A-203ENST00000456563 PRDM7Q9NQW5 492 aa16.95■□□□□ 0.3
FAM239A-203ENST00000456563 SLC22A11Q9NSA0 550 aa16.95■□□□□ 0.3
FAM239A-203ENST00000456563 NMRK1Q9NWW6 199 aa16.95■□□□□ 0.3
FAM239A-203ENST00000456563 NAALAD2Q9Y3Q0 740 aa16.95■□□□□ 0.3
FAM239A-203ENST00000456563 A0A088AWK7 358 aa16.94■□□□□ 0.3
FAM239A-203ENST00000456563 CHEK2O96017 543 aa16.94■□□□□ 0.3
FAM239A-203ENST00000456563 ZNF10P21506 573 aaPredicted RBP16.94■□□□□ 0.3
FAM239A-203ENST00000456563 TSFMP43897 325 aaKnown RBP16.94■□□□□ 0.3
FAM239A-203ENST00000456563 OR1D4P47884 311 aa16.94■□□□□ 0.3
FAM239A-203ENST00000456563 PLA2G16P53816 162 aa16.94■□□□□ 0.3
FAM239A-203ENST00000456563 DSG2Q14126 1118 aa16.94■□□□□ 0.3
FAM239A-203ENST00000456563 FAM199XQ6PEV8 388 aaPredicted RBP16.94■□□□□ 0.3
FAM239A-203ENST00000456563 FAM198BQ6UWH4 519 aa16.94■□□□□ 0.3
FAM239A-203ENST00000456563 COX15Q7KZN9 410 aa16.94■□□□□ 0.3
FAM239A-203ENST00000456563 TRIM46Q7Z4K8 759 aa16.94■□□□□ 0.3
FAM239A-203ENST00000456563 METTL27Q8N6F8 245 aaPredicted RBP16.94■□□□□ 0.3
FAM239A-203ENST00000456563 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.94■□□□□ 0.3
FAM239A-203ENST00000456563 CKAP2Q8WWK9 683 aa16.94■□□□□ 0.3
FAM239A-203ENST00000456563 FAR2Q96K12 515 aa16.94■□□□□ 0.3
FAM239A-203ENST00000456563 QRFPRQ96P65 431 aa16.94■□□□□ 0.3
FAM239A-203ENST00000456563 HBEGFQ99075 208 aa16.94■□□□□ 0.3
FAM239A-203ENST00000456563 TBCDQ9BTW9 1192 aa16.94■□□□□ 0.3
FAM239A-203ENST00000456563 FAM117AQ9C073 453 aa16.94■□□□□ 0.3
FAM239A-203ENST00000456563 ROGDIQ9GZN7 287 aa16.94■□□□□ 0.3
FAM239A-203ENST00000456563 IFT80Q9P2H3 777 aaPredicted RBP16.94■□□□□ 0.3
FAM239A-203ENST00000456563 DNAJC15Q9Y5T4 150 aa16.94■□□□□ 0.3
FAM239A-203ENST00000456563 MAU2Q9Y6X3 613 aa16.94■□□□□ 0.3
FAM239A-203ENST00000456563 TMEM8BA6NDV4 472 aa16.93■□□□□ 0.3
FAM239A-203ENST00000456563 TMEM233B4DJY2 109 aa16.93■□□□□ 0.3
FAM239A-203ENST00000456563 SGK494L7N484 410 aa16.93■□□□□ 0.3
FAM239A-203ENST00000456563 PLPP1O14494 284 aa16.93■□□□□ 0.3
FAM239A-203ENST00000456563 TERTO14746 1132 aaKnown RBP16.93■□□□□ 0.3
FAM239A-203ENST00000456563 SH3BGRLO75368 114 aa16.93■□□□□ 0.3
FAM239A-203ENST00000456563 SCELO95171 688 aa16.93■□□□□ 0.3
FAM239A-203ENST00000456563 B3GALT4O96024 378 aa16.93■□□□□ 0.3
FAM239A-203ENST00000456563 ALBP02768 609 aa16.93■□□□□ 0.3
FAM239A-203ENST00000456563 RAB40ALP0C0E4 278 aa16.93■□□□□ 0.3
FAM239A-203ENST00000456563 FBLP22087 321 aaKnown RBP16.93■□□□□ 0.3
FAM239A-203ENST00000456563 RAP1GDS1P52306 607 aa16.93■□□□□ 0.3
FAM239A-203ENST00000456563 BTN3A2P78410 334 aa16.93■□□□□ 0.3
FAM239A-203ENST00000456563 OCRLQ01968 901 aa16.93■□□□□ 0.3
FAM239A-203ENST00000456563 CLN3Q13286 438 aa16.93■□□□□ 0.3
FAM239A-203ENST00000456563 TGIF1Q15583 401 aa16.93■□□□□ 0.3
FAM239A-203ENST00000456563 ARHGAP40Q5TG30 622 aa16.93■□□□□ 0.3
FAM239A-203ENST00000456563 MRPL14Q6P1L8 145 aaKnown RBP16.93■□□□□ 0.3
FAM239A-203ENST00000456563 OVCH1Q7RTY7 1134 aa16.93■□□□□ 0.3
FAM239A-203ENST00000456563 IL22RA1Q8N6P7 574 aa16.93■□□□□ 0.3
FAM239A-203ENST00000456563 ZNF781Q8N8C0 355 aa16.93■□□□□ 0.3
FAM239A-203ENST00000456563 AMER3Q8N944 861 aa16.93■□□□□ 0.3
FAM239A-203ENST00000456563 AGR3Q8TD06 166 aa16.93■□□□□ 0.3
FAM239A-203ENST00000456563 LRRC8CQ8TDW0 803 aa16.93■□□□□ 0.3
FAM239A-203ENST00000456563 CT55Q8WUE5 264 aa16.93■□□□□ 0.3
FAM239A-203ENST00000456563 TWIST2Q8WVJ9 160 aa16.93■□□□□ 0.3
FAM239A-203ENST00000456563 KCNE4Q8WWG9 221 aa16.93■□□□□ 0.3
FAM239A-203ENST00000456563 COL26A1Q96A83 441 aa16.93■□□□□ 0.3
FAM239A-203ENST00000456563 FKBP10Q96AY3 582 aa16.93■□□□□ 0.3
FAM239A-203ENST00000456563 ACPTQ9BZG2 426 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms