RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 TFEBP19484 476 aa5.59□□□□□ -1.51
HLA-DPA3-207ENST00000454398 CHRNB4P30926 498 aa5.59□□□□□ -1.51
HLA-DPA3-207ENST00000454398 STIP1P31948 543 aaKnown RBP5.59□□□□□ -1.51
HLA-DPA3-207ENST00000454398 ADH7P40394 386 aa5.59□□□□□ -1.51
HLA-DPA3-207ENST00000454398 CYB561P49447 251 aa5.59□□□□□ -1.51
HLA-DPA3-207ENST00000454398 IST1P53990 364 aa5.59□□□□□ -1.51
HLA-DPA3-207ENST00000454398 ABATP80404 500 aa5.59□□□□□ -1.51
HLA-DPA3-207ENST00000454398 ID2Q02363 134 aa5.59□□□□□ -1.51
HLA-DPA3-207ENST00000454398 DHX9Q08211 1270 aaKnown RBP5.59□□□□□ -1.51
HLA-DPA3-207ENST00000454398 PMPCAQ10713 525 aa5.59□□□□□ -1.51
HLA-DPA3-207ENST00000454398 FOXD4Q12950 439 aaPredicted RBP5.59□□□□□ -1.51
HLA-DPA3-207ENST00000454398 ZNF460Q14592 562 aa5.59□□□□□ -1.51
HLA-DPA3-207ENST00000454398 C18orf21Q32NC0 220 aaPredicted RBP5.59□□□□□ -1.51
HLA-DPA3-207ENST00000454398 KRTCAP3Q53RY4 240 aa5.59□□□□□ -1.51
HLA-DPA3-207ENST00000454398 HSP90AA5PQ58FG0 334 aa5.59□□□□□ -1.51
HLA-DPA3-207ENST00000454398 FBXO48Q5FWF7 155 aa5.59□□□□□ -1.51
HLA-DPA3-207ENST00000454398 TTC27Q6P3X3 843 aa5.59□□□□□ -1.51
HLA-DPA3-207ENST00000454398 CYHR1Q6ZMK1 362 aa5.59□□□□□ -1.51
HLA-DPA3-207ENST00000454398 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.59□□□□□ -1.51
HLA-DPA3-207ENST00000454398 ZNF321PQ8N8H1 164 aa5.59□□□□□ -1.51
HLA-DPA3-207ENST00000454398 MFSD9Q8NBP5 474 aa5.59□□□□□ -1.51
HLA-DPA3-207ENST00000454398 CAMKVQ8NCB2 501 aa5.59□□□□□ -1.51
HLA-DPA3-207ENST00000454398 OR5M3Q8NGP4 307 aa5.59□□□□□ -1.51
HLA-DPA3-207ENST00000454398 M1APQ8TC57 530 aa5.59□□□□□ -1.51
HLA-DPA3-207ENST00000454398 MCOLN3Q8TDD5 553 aa5.59□□□□□ -1.51
HLA-DPA3-207ENST00000454398 ELP5Q8TE02 316 aa5.59□□□□□ -1.51
HLA-DPA3-207ENST00000454398 DOK4Q8TEW6 326 aa5.59□□□□□ -1.51
HLA-DPA3-207ENST00000454398 PHF10Q8WUB8 498 aaKnown RBP5.59□□□□□ -1.51
HLA-DPA3-207ENST00000454398 EEF1AKMT1Q8WVE0 214 aa5.59□□□□□ -1.51
HLA-DPA3-207ENST00000454398 KCNJ9Q92806 393 aa5.59□□□□□ -1.51
HLA-DPA3-207ENST00000454398 NEIL2Q969S2 332 aa5.59□□□□□ -1.51
HLA-DPA3-207ENST00000454398 NCLNQ969V3 563 aa5.59□□□□□ -1.51
HLA-DPA3-207ENST00000454398 TMEM125Q96AQ2 219 aa5.59□□□□□ -1.51
HLA-DPA3-207ENST00000454398 PTCHD1Q96NR3 888 aa5.59□□□□□ -1.51
HLA-DPA3-207ENST00000454398 CSF3RQ99062 836 aa5.59□□□□□ -1.51
HLA-DPA3-207ENST00000454398 SMR3AQ99954 134 aa5.59□□□□□ -1.51
HLA-DPA3-207ENST00000454398 ZNF559Q9BR84 538 aa5.59□□□□□ -1.51
HLA-DPA3-207ENST00000454398 GPATCH1Q9BRR8 931 aaKnown RBP5.59□□□□□ -1.51
HLA-DPA3-207ENST00000454398 CNPPD1Q9BV87 410 aa5.59□□□□□ -1.51
HLA-DPA3-207ENST00000454398 RBSNQ9H1K0 784 aa5.59□□□□□ -1.51
HLA-DPA3-207ENST00000454398 CCDC68Q9H2F9 335 aa5.59□□□□□ -1.51
HLA-DPA3-207ENST00000454398 KLHL31Q9H511 634 aa5.59□□□□□ -1.51
HLA-DPA3-207ENST00000454398 PNO1Q9NRX1 252 aaKnown RBP5.59□□□□□ -1.51
HLA-DPA3-207ENST00000454398 IARS2Q9NSE4 1012 aaKnown RBP5.59□□□□□ -1.51
HLA-DPA3-207ENST00000454398 C20orf96Q9NUD7 363 aaPredicted RBP5.59□□□□□ -1.51
HLA-DPA3-207ENST00000454398 CCM2LQ9NUG4 571 aaPredicted RBP5.59□□□□□ -1.51
HLA-DPA3-207ENST00000454398 COQ3Q9NZJ6 369 aa5.59□□□□□ -1.51
HLA-DPA3-207ENST00000454398 SAMD15Q9P1V8 674 aa5.59□□□□□ -1.51
HLA-DPA3-207ENST00000454398 TRMT6Q9UJA5 497 aaKnown RBP5.59□□□□□ -1.51
HLA-DPA3-207ENST00000454398 FBXW2Q9UKT8 454 aa5.59□□□□□ -1.51
HLA-DPA3-207ENST00000454398 FAM215AQ9Y5M1 114 aa5.59□□□□□ -1.51
HLA-DPA3-207ENST00000454398 MRFAP1Q9Y605 127 aa5.59□□□□□ -1.51
HLA-DPA3-207ENST00000454398 ATRQ13535 2644 aa5.58□□□□□ -1.52
HLA-DPA3-207ENST00000454398 A0A0G2JNJ9 132 aa5.58□□□□□ -1.52
HLA-DPA3-207ENST00000454398 TCRBV16S1A1N1A0A5B0 115 aa5.58□□□□□ -1.52
HLA-DPA3-207ENST00000454398 NPEPPSL1A6NEC2 478 aa5.58□□□□□ -1.52
HLA-DPA3-207ENST00000454398 GFYI3L273 518 aa5.58□□□□□ -1.52
HLA-DPA3-207ENST00000454398 WWP2O00308 870 aa5.58□□□□□ -1.52
HLA-DPA3-207ENST00000454398 TXNDC9O14530 226 aa5.58□□□□□ -1.52
HLA-DPA3-207ENST00000454398 ZBTB14O43829 449 aa5.58□□□□□ -1.52
HLA-DPA3-207ENST00000454398 PRMT3O60678 531 aa5.58□□□□□ -1.52
HLA-DPA3-207ENST00000454398 ZNF354AO60765 605 aaPredicted RBP5.58□□□□□ -1.52
HLA-DPA3-207ENST00000454398 OR2J2O76002 312 aa5.58□□□□□ -1.52
HLA-DPA3-207ENST00000454398 HAUS5O94927 633 aa5.58□□□□□ -1.52
HLA-DPA3-207ENST00000454398 MLYCDO95822 493 aa5.58□□□□□ -1.52
HLA-DPA3-207ENST00000454398 MPC1LP0DKB6 136 aa5.58□□□□□ -1.52
HLA-DPA3-207ENST00000454398 ENO3P13929 434 aaPredicted RBP5.58□□□□□ -1.52
HLA-DPA3-207ENST00000454398 PAMP19021 973 aa5.58□□□□□ -1.52
HLA-DPA3-207ENST00000454398 KLK2P20151 261 aa5.58□□□□□ -1.52
HLA-DPA3-207ENST00000454398 TPSB2P20231 275 aa5.58□□□□□ -1.52
HLA-DPA3-207ENST00000454398 SAT1P21673 171 aa5.58□□□□□ -1.52
HLA-DPA3-207ENST00000454398 CERS1P27544 350 aa5.58□□□□□ -1.52
HLA-DPA3-207ENST00000454398 HSD17B2P37059 387 aa5.58□□□□□ -1.52
HLA-DPA3-207ENST00000454398 SOX3P41225 446 aa5.58□□□□□ -1.52
HLA-DPA3-207ENST00000454398 MAGEA5P43359 124 aa5.58□□□□□ -1.52
HLA-DPA3-207ENST00000454398 DNASE1L1P49184 302 aa5.58□□□□□ -1.52
HLA-DPA3-207ENST00000454398 HLCSP50747 726 aa5.58□□□□□ -1.52
HLA-DPA3-207ENST00000454398 CCR8P51685 355 aa5.58□□□□□ -1.52
HLA-DPA3-207ENST00000454398 ADARP55265 1226 aaKnown RBP5.58□□□□□ -1.52
HLA-DPA3-207ENST00000454398 DLX5P56178 289 aa5.58□□□□□ -1.52
HLA-DPA3-207ENST00000454398 REEP5Q00765 189 aa5.58□□□□□ -1.52
HLA-DPA3-207ENST00000454398 PLGLB1Q02325 96 aa5.58□□□□□ -1.52
HLA-DPA3-207ENST00000454398 THOC5Q13769 683 aaKnown RBP5.58□□□□□ -1.52
HLA-DPA3-207ENST00000454398 HERC3Q15034 1050 aa5.58□□□□□ -1.52
HLA-DPA3-207ENST00000454398 RPS6KA1Q15418 735 aa5.58□□□□□ -1.52
HLA-DPA3-207ENST00000454398 TPSAB1Q15661 275 aa5.58□□□□□ -1.52
HLA-DPA3-207ENST00000454398 XKR6Q5GH73 641 aa5.58□□□□□ -1.52
HLA-DPA3-207ENST00000454398 TOR1AIP1Q5JTV8 583 aa5.58□□□□□ -1.52
HLA-DPA3-207ENST00000454398 HP1BP3Q5SSJ5 553 aaPredicted RBP5.58□□□□□ -1.52
HLA-DPA3-207ENST00000454398 ZNF585AQ6P3V2 769 aa5.58□□□□□ -1.52
HLA-DPA3-207ENST00000454398 PAQR3Q6TCH7 311 aa5.58□□□□□ -1.52
HLA-DPA3-207ENST00000454398 WDR53Q7Z5U6 358 aaPredicted RBP5.58□□□□□ -1.52
HLA-DPA3-207ENST00000454398 LIX1LQ8IVB5 337 aa5.58□□□□□ -1.52
HLA-DPA3-207ENST00000454398 DMRTC2Q8IXT2 367 aaPredicted RBP5.58□□□□□ -1.52
HLA-DPA3-207ENST00000454398 VWA5B2Q8N398 1253 aa5.58□□□□□ -1.52
HLA-DPA3-207ENST00000454398 AFAP1L2Q8N4X5 818 aa5.58□□□□□ -1.52
HLA-DPA3-207ENST00000454398 TMEM156Q8N614 296 aa5.58□□□□□ -1.52
HLA-DPA3-207ENST00000454398 HORMAD2Q8N7B1 307 aa5.58□□□□□ -1.52
HLA-DPA3-207ENST00000454398 ANKRD53Q8N9V6 530 aa5.58□□□□□ -1.52
HLA-DPA3-207ENST00000454398 APCDD1LQ8NCL9 501 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms