RNA–Protein interactions for RNA: ENST00000454233.6

DDX39A-203, Transcript of DExD-box helicase 39A, humanhuman

TSL 3 BASIC

Gene DDX39A, Length 922 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-203ENST00000454233 CREB3L4Q8TEY5 395 aa10.06□□□□□ -0.8
DDX39A-203ENST00000454233 SSC4DQ8WTU2 575 aa10.06□□□□□ -0.8
DDX39A-203ENST00000454233 ZNF592Q92610 1267 aa10.06□□□□□ -0.8
DDX39A-203ENST00000454233 EXT2Q93063 718 aa10.06□□□□□ -0.8
DDX39A-203ENST00000454233 GAL3ST3Q96A11 431 aa10.06□□□□□ -0.8
DDX39A-203ENST00000454233 SEC16BQ96JE7 1060 aa10.06□□□□□ -0.8
DDX39A-203ENST00000454233 FAR2Q96K12 515 aa10.06□□□□□ -0.8
DDX39A-203ENST00000454233 UBXN10Q96LJ8 280 aa10.06□□□□□ -0.8
DDX39A-203ENST00000454233 ZNF354BQ96LW1 612 aa10.06□□□□□ -0.8
DDX39A-203ENST00000454233 BARD1Q99728 777 aaKnown RBP10.06□□□□□ -0.8
DDX39A-203ENST00000454233 TMEM79Q9BSE2 394 aa10.06□□□□□ -0.8
DDX39A-203ENST00000454233 RNF32Q9H0A6 362 aa10.06□□□□□ -0.8
DDX39A-203ENST00000454233 RHBGQ9H310 441 aa10.06□□□□□ -0.8
DDX39A-203ENST00000454233 EHD1Q9H4M9 534 aa10.06□□□□□ -0.8
DDX39A-203ENST00000454233 NT5DC2Q9H857 520 aa10.06□□□□□ -0.8
DDX39A-203ENST00000454233 KCNK13Q9HB14 408 aa10.06□□□□□ -0.8
DDX39A-203ENST00000454233 PRM3Q9NNZ6 103 aa10.06□□□□□ -0.8
DDX39A-203ENST00000454233 PLA2G3Q9NZ20 509 aa10.06□□□□□ -0.8
DDX39A-203ENST00000454233 STMN3Q9NZ72 180 aa10.06□□□□□ -0.8
DDX39A-203ENST00000454233 ABI3Q9P2A4 366 aa10.06□□□□□ -0.8
DDX39A-203ENST00000454233 MTRF1LQ9UGC7 380 aaKnown RBP10.06□□□□□ -0.8
DDX39A-203ENST00000454233 NTNG1Q9Y2I2 539 aa10.06□□□□□ -0.8
DDX39A-203ENST00000454233 SUPT3HB4E1H0 165 aa10.05□□□□□ -0.8
DDX39A-203ENST00000454233 TAPBPO15533 448 aa10.05□□□□□ -0.8
DDX39A-203ENST00000454233 CCNT2O60583 730 aaKnown RBP10.05□□□□□ -0.8
DDX39A-203ENST00000454233 PRMT3O60678 531 aa10.05□□□□□ -0.8
DDX39A-203ENST00000454233 SUPT3HO75486 399 aa10.05□□□□□ -0.8
DDX39A-203ENST00000454233 WDPCPO95876 746 aa10.05□□□□□ -0.8
DDX39A-203ENST00000454233 LTA4HP09960 611 aaKnown RBP10.05□□□□□ -0.8
DDX39A-203ENST00000454233 SLC35E2BP0CK96 405 aa10.05□□□□□ -0.8
DDX39A-203ENST00000454233 SMIM10L1P0DMW3 83 aa10.05□□□□□ -0.8
DDX39A-203ENST00000454233 TFEBP19484 476 aa10.05□□□□□ -0.8
DDX39A-203ENST00000454233 TNFSF10P50591 281 aa10.05□□□□□ -0.8
DDX39A-203ENST00000454233 TAS2R50P59544 299 aa10.05□□□□□ -0.8
DDX39A-203ENST00000454233 BTN3A2P78410 334 aa10.05□□□□□ -0.8
DDX39A-203ENST00000454233 HYAL2Q12891 473 aa10.05□□□□□ -0.8
DDX39A-203ENST00000454233 INAQ16352 499 aa10.05□□□□□ -0.8
DDX39A-203ENST00000454233 HIST2H2ACQ16777 129 aaPredicted RBP10.05□□□□□ -0.8
DDX39A-203ENST00000454233 FBXO48Q5FWF7 155 aa10.05□□□□□ -0.8
DDX39A-203ENST00000454233 XKR6Q5GH73 641 aa10.05□□□□□ -0.8
DDX39A-203ENST00000454233 PAGE2BQ5JRK9 111 aa10.05□□□□□ -0.8
DDX39A-203ENST00000454233 HIST2H2AA3Q6FI13 130 aa10.05□□□□□ -0.8
DDX39A-203ENST00000454233 QSOX2Q6ZRP7 698 aa10.05□□□□□ -0.8
DDX39A-203ENST00000454233 CCDC91Q7Z6B0 441 aa10.05□□□□□ -0.8
DDX39A-203ENST00000454233 CMC1Q7Z7K0 106 aa10.05□□□□□ -0.8
DDX39A-203ENST00000454233 CYP4X1Q8N118 509 aa10.05□□□□□ -0.8
DDX39A-203ENST00000454233 BCORP1Q8N888 145 aa10.05□□□□□ -0.8
DDX39A-203ENST00000454233 ST6GALNAC3Q8NDV1 305 aa10.05□□□□□ -0.8
DDX39A-203ENST00000454233 ARMC2Q8NEN0 867 aa10.05□□□□□ -0.8
DDX39A-203ENST00000454233 FAR1Q8WVX9 515 aa10.05□□□□□ -0.8
DDX39A-203ENST00000454233 TSLPQ969D9 159 aa10.05□□□□□ -0.8
DDX39A-203ENST00000454233 ESAMQ96AP7 390 aa10.05□□□□□ -0.8
DDX39A-203ENST00000454233 MRRFQ96E11 262 aaKnown RBP10.05□□□□□ -0.8
DDX39A-203ENST00000454233 PTCD3Q96EY7 689 aaKnown RBP10.05□□□□□ -0.8
DDX39A-203ENST00000454233 SMIM10Q96HG1 83 aa10.05□□□□□ -0.8
DDX39A-203ENST00000454233 PTCHD1Q96NR3 888 aa10.05□□□□□ -0.8
DDX39A-203ENST00000454233 EFCAB11Q9BUY7 163 aa10.05□□□□□ -0.8
DDX39A-203ENST00000454233 TSPYL1Q9H0U9 437 aa10.05□□□□□ -0.8
DDX39A-203ENST00000454233 KLHL31Q9H511 634 aa10.05□□□□□ -0.8
DDX39A-203ENST00000454233 ALG9Q9H6U8 611 aa10.05□□□□□ -0.8
DDX39A-203ENST00000454233 MMP25Q9NPA2 562 aa10.05□□□□□ -0.8
DDX39A-203ENST00000454233 ZDHHC18Q9NUE0 388 aa10.05□□□□□ -0.8
DDX39A-203ENST00000454233 NUDT4Q9NZJ9 180 aa10.05□□□□□ -0.8
DDX39A-203ENST00000454233 PTBP2Q9UKA9 531 aaKnown RBP10.05□□□□□ -0.8
DDX39A-203ENST00000454233 ACOT9Q9Y305 439 aa10.05□□□□□ -0.8
DDX39A-203ENST00000454233 SCN2AQ99250 2005 aa10.04□□□□□ -0.8
DDX39A-203ENST00000454233 A0A087X1B8 175 aa10.04□□□□□ -0.8
DDX39A-203ENST00000454233 CTAGE15A4D2H0 777 aa10.04□□□□□ -0.8
DDX39A-203ENST00000454233 OR5H15A6NDH6 313 aa10.04□□□□□ -0.8
DDX39A-203ENST00000454233 SYCE1LA8MT33 242 aa10.04□□□□□ -0.8
DDX39A-203ENST00000454233 ERI3O43414 337 aaKnown RBP10.04□□□□□ -0.8
DDX39A-203ENST00000454233 KERAO60938 352 aa10.04□□□□□ -0.8
DDX39A-203ENST00000454233 DNAJB6O75190 326 aa10.04□□□□□ -0.8
DDX39A-203ENST00000454233 SEMA7AO75326 666 aa10.04□□□□□ -0.8
DDX39A-203ENST00000454233 CLEC3AO75596 197 aa10.04□□□□□ -0.8
DDX39A-203ENST00000454233 DDAH2O95865 285 aa10.04□□□□□ -0.8
DDX39A-203ENST00000454233 F10P00742 488 aa10.04□□□□□ -0.8
DDX39A-203ENST00000454233 GP1BBP13224 206 aa10.04□□□□□ -0.8
DDX39A-203ENST00000454233 EDN3P14138 238 aa10.04□□□□□ -0.8
DDX39A-203ENST00000454233 IRF8Q02556 426 aa10.04□□□□□ -0.8
DDX39A-203ENST00000454233 TGM3Q08188 693 aa10.04□□□□□ -0.8
DDX39A-203ENST00000454233 LAPTM5Q13571 262 aa10.04□□□□□ -0.8
DDX39A-203ENST00000454233 DOC2AQ14183 400 aa10.04□□□□□ -0.8
DDX39A-203ENST00000454233 EFTUD2Q15029 972 aaKnown RBP eCLIP10.04□□□□□ -0.84e-7■■■■□ 26.6
DDX39A-203ENST00000454233 UAP1Q16222 522 aaPredicted RBP10.04□□□□□ -0.8
DDX39A-203ENST00000454233 MEP1AQ16819 746 aa10.04□□□□□ -0.8
DDX39A-203ENST00000454233 ACER2Q5QJU3 275 aa10.04□□□□□ -0.8
DDX39A-203ENST00000454233 MROH9Q5TGP6 573 aa10.04□□□□□ -0.8
DDX39A-203ENST00000454233 H3F3CQ6NXT2 135 aa10.04□□□□□ -0.8
DDX39A-203ENST00000454233 TRIM40Q6P9F5 258 aa10.04□□□□□ -0.8
DDX39A-203ENST00000454233 LRRC70Q7Z2Q7 622 aa10.04□□□□□ -0.8
DDX39A-203ENST00000454233 ISCA2Q86U28 154 aa10.04□□□□□ -0.8
DDX39A-203ENST00000454233 CTAGE6Q86UF2 777 aa10.04□□□□□ -0.8
DDX39A-203ENST00000454233 CA13Q8N1Q1 262 aa10.04□□□□□ -0.8
DDX39A-203ENST00000454233 MMGT1Q8N4V1 131 aa10.04□□□□□ -0.8
DDX39A-203ENST00000454233 SLC5A8Q8N695 610 aa10.04□□□□□ -0.8
DDX39A-203ENST00000454233 MS4A6EQ96DS6 147 aa10.04□□□□□ -0.8
DDX39A-203ENST00000454233 NPLQ9BXD5 320 aaPredicted RBP10.04□□□□□ -0.8
DDX39A-203ENST00000454233 CD244Q9BZW8 370 aa10.04□□□□□ -0.8
DDX39A-203ENST00000454233 COPS7BQ9H9Q2 264 aaPredicted RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms