RNA–Protein interactions for RNA: ENST00000453744.6

UBE2D3-210, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 3,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-210ENST00000453744 CDK6Q00534 326 aa13.35□□□□□ -0.27
UBE2D3-210ENST00000453744 SNAPC1Q16533 368 aa13.35□□□□□ -0.27
UBE2D3-210ENST00000453744 BAK1Q16611 211 aa13.35□□□□□ -0.27
UBE2D3-210ENST00000453744 ZNF367Q7RTV3 350 aa13.35□□□□□ -0.27
UBE2D3-210ENST00000453744 ADCK2Q7Z695 626 aa13.35□□□□□ -0.27
UBE2D3-210ENST00000453744 RNF130Q86XS8 419 aa13.35□□□□□ -0.27
UBE2D3-210ENST00000453744 CCDC71Q8IV32 467 aaPredicted RBP13.35□□□□□ -0.27
UBE2D3-210ENST00000453744 CCDC28AQ8IWP9 274 aa13.35□□□□□ -0.27
UBE2D3-210ENST00000453744 NPAS3Q8IXF0 933 aa13.35□□□□□ -0.27
UBE2D3-210ENST00000453744 LMNTD1Q8N9Z9 388 aa13.35□□□□□ -0.27
UBE2D3-210ENST00000453744 BRI3BPQ8WY22 251 aa13.35□□□□□ -0.27
UBE2D3-210ENST00000453744 TRIB2Q92519 343 aa13.35□□□□□ -0.27
UBE2D3-210ENST00000453744 FOPNLQ96NB1 174 aa13.35□□□□□ -0.27
UBE2D3-210ENST00000453744 SNX18Q96RF0 628 aa13.35□□□□□ -0.27
UBE2D3-210ENST00000453744 TMEM121BQ9BXQ6 578 aaPredicted RBP13.35□□□□□ -0.27
UBE2D3-210ENST00000453744 POLR2J3Q9H1A7 115 aaKnown RBP13.35□□□□□ -0.27
UBE2D3-210ENST00000453744 PCDHB11Q9Y5F2 797 aa13.35□□□□□ -0.27
UBE2D3-210ENST00000453744 ANK1P16157 1881 aa13.34□□□□□ -0.27
UBE2D3-210ENST00000453744 PRRG1O14668 218 aa13.34□□□□□ -0.27
UBE2D3-210ENST00000453744 ICMTO60725 284 aa13.34□□□□□ -0.27
UBE2D3-210ENST00000453744 CKMP06732 381 aa13.34□□□□□ -0.27
UBE2D3-210ENST00000453744 CLEC2LP0C7M8 214 aa13.34□□□□□ -0.27
UBE2D3-210ENST00000453744 GPC1P35052 558 aa13.34□□□□□ -0.27
UBE2D3-210ENST00000453744 ATP13A5Q4VNC0 1218 aa13.34□□□□□ -0.27
UBE2D3-210ENST00000453744 UBQLNLQ8IYU4 475 aa13.34□□□□□ -0.27
UBE2D3-210ENST00000453744 IQCF1Q8N6M8 205 aa13.34□□□□□ -0.27
UBE2D3-210ENST00000453744 DEDD2Q8WXF8 326 aa13.34□□□□□ -0.27
UBE2D3-210ENST00000453744 CLIP3Q96DZ5 547 aa13.34□□□□□ -0.27
UBE2D3-210ENST00000453744 ANKRA2Q9H9E1 313 aa13.34□□□□□ -0.27
UBE2D3-210ENST00000453744 IL26Q9NPH9 171 aa13.34□□□□□ -0.27
UBE2D3-210ENST00000453744 GRIP1Q9Y3R0 1128 aa13.34□□□□□ -0.27
UBE2D3-210ENST00000453744 I3L521 148 aa13.34□□□□□ -0.27
UBE2D3-210ENST00000453744 AOC2O75106 756 aa13.34□□□□□ -0.27
UBE2D3-210ENST00000453744 ENTPD6O75354 484 aa13.34□□□□□ -0.27
UBE2D3-210ENST00000453744 PRKCAP17252 672 aa13.34□□□□□ -0.27
UBE2D3-210ENST00000453744 TEAD4Q15561 434 aa13.34□□□□□ -0.27
UBE2D3-210ENST00000453744 CEP295NLQ96MC4 621 aa13.34□□□□□ -0.27
UBE2D3-210ENST00000453744 CCDC32Q9BV29 185 aa13.34□□□□□ -0.27
UBE2D3-210ENST00000453744 KLHL1Q9NR64 748 aa13.34□□□□□ -0.27
UBE2D3-210ENST00000453744 NKIRAS2Q9NYR9 191 aa13.34□□□□□ -0.27
UBE2D3-210ENST00000453744 ENOPH1Q9UHY7 261 aa13.34□□□□□ -0.27
UBE2D3-210ENST00000453744 MAPRE3Q9UPY8 281 aa13.34□□□□□ -0.27
UBE2D3-210ENST00000453744 ANGPT4Q9Y264 503 aa13.34□□□□□ -0.27
UBE2D3-210ENST00000453744 KLK8O60259 260 aa13.34□□□□□ -0.27
UBE2D3-210ENST00000453744 CYP17A1P05093 508 aa13.34□□□□□ -0.27
UBE2D3-210ENST00000453744 CSTF2P33240 577 aaKnown RBP eCLIP13.34□□□□□ -0.278e-8■■■■□ 20.3
UBE2D3-210ENST00000453744 OR1D2P34982 312 aa13.34□□□□□ -0.27
UBE2D3-210ENST00000453744 UGT2B10P36537 528 aa13.34□□□□□ -0.27
UBE2D3-210ENST00000453744 CSKP41240 450 aa13.34□□□□□ -0.27
UBE2D3-210ENST00000453744 GPAT3Q53EU6 434 aa13.34□□□□□ -0.27
UBE2D3-210ENST00000453744 ANXA8L1Q5VT79 327 aa13.34□□□□□ -0.27
UBE2D3-210ENST00000453744 TTC23LQ6PF05 361 aa13.34□□□□□ -0.27
UBE2D3-210ENST00000453744 SHFQ7M4L6 423 aa13.34□□□□□ -0.27
UBE2D3-210ENST00000453744 LUZP2Q86TE4 346 aa13.34□□□□□ -0.27
UBE2D3-210ENST00000453744 MEX3DQ86XN8 651 aaKnown RBP13.34□□□□□ -0.27
UBE2D3-210ENST00000453744 LRRC20Q8TCA0 184 aa13.34□□□□□ -0.27
UBE2D3-210ENST00000453744 RASSF5Q8WWW0 418 aa13.34□□□□□ -0.27
UBE2D3-210ENST00000453744 RAB8BQ92930 207 aa13.34□□□□□ -0.27
UBE2D3-210ENST00000453744 C1QTNF3Q9BXJ4 246 aa13.34□□□□□ -0.27
UBE2D3-210ENST00000453744 FBXL12Q9NXK8 326 aa13.34□□□□□ -0.27
UBE2D3-210ENST00000453744 PTNP21246 168 aa13.33□□□□□ -0.27
UBE2D3-210ENST00000453744 SERPINA4P29622 427 aa13.33□□□□□ -0.27
UBE2D3-210ENST00000453744 NSG1P42857 185 aa13.33□□□□□ -0.27
UBE2D3-210ENST00000453744 PURAQ00577 322 aaKnown RBP13.33□□□□□ -0.27
UBE2D3-210ENST00000453744 UGT8Q16880 541 aa13.33□□□□□ -0.27
UBE2D3-210ENST00000453744 DCST1Q5T197 706 aa13.33□□□□□ -0.27
UBE2D3-210ENST00000453744 USP45Q70EL2 814 aa13.33□□□□□ -0.27
UBE2D3-210ENST00000453744 C16orf62Q7Z3J2 963 aa13.33□□□□□ -0.27
UBE2D3-210ENST00000453744 SERPINA11Q86U17 422 aa13.33□□□□□ -0.27
UBE2D3-210ENST00000453744 PEX5LQ8IYB4 626 aa13.33□□□□□ -0.27
UBE2D3-210ENST00000453744 YIPF7Q8N8F6 280 aa13.33□□□□□ -0.27
UBE2D3-210ENST00000453744 ASB15Q8WXK1 588 aa13.33□□□□□ -0.27
UBE2D3-210ENST00000453744 FAM83DQ9H4H8 585 aa13.33□□□□□ -0.27
UBE2D3-210ENST00000453744 RIMKLBQ9ULI2 386 aa13.33□□□□□ -0.27
UBE2D3-210ENST00000453744 LTBP3Q9NS15 1303 aa13.33□□□□□ -0.27
UBE2D3-210ENST00000453744 ISM1B1AKI9 464 aa13.33□□□□□ -0.28
UBE2D3-210ENST00000453744 HNRNPCL2B2RXH8 293 aa13.33□□□□□ -0.28
UBE2D3-210ENST00000453744 GPX5O75715 221 aa13.33□□□□□ -0.28
UBE2D3-210ENST00000453744 PPIBP23284 216 aaKnown RBP13.33□□□□□ -0.28
UBE2D3-210ENST00000453744 HMGCLP35914 325 aa13.33□□□□□ -0.28
UBE2D3-210ENST00000453744 SGSHP51688 502 aa13.33□□□□□ -0.28
UBE2D3-210ENST00000453744 MEF2AQ02078 507 aaPredicted RBP13.33□□□□□ -0.28
UBE2D3-210ENST00000453744 E2F2Q14209 437 aa13.33□□□□□ -0.28
UBE2D3-210ENST00000453744 ATAT1Q5SQI0 421 aa13.33□□□□□ -0.28
UBE2D3-210ENST00000453744 C9orf131Q5VYM1 1079 aa13.33□□□□□ -0.28
UBE2D3-210ENST00000453744 ATP6V1C2Q8NEY4 427 aa13.33□□□□□ -0.28
UBE2D3-210ENST00000453744 CLP1Q92989 425 aaKnown RBP13.33□□□□□ -0.28
UBE2D3-210ENST00000453744 RNFT2Q96EX2 444 aa13.33□□□□□ -0.28
UBE2D3-210ENST00000453744 OTUB1Q96FW1 271 aaPredicted RBP13.33□□□□□ -0.28
UBE2D3-210ENST00000453744 UROC1Q96N76 676 aa13.33□□□□□ -0.28
UBE2D3-210ENST00000453744 NLNQ9BYT8 704 aa13.33□□□□□ -0.28
UBE2D3-210ENST00000453744 OR51B5Q9H339 312 aa13.33□□□□□ -0.28
UBE2D3-210ENST00000453744 SEMA3GQ9NS98 782 aa13.33□□□□□ -0.28
UBE2D3-210ENST00000453744 FAM120CQ9NX05 1096 aaKnown RBP13.33□□□□□ -0.28
UBE2D3-210ENST00000453744 ZNF224Q9NZL3 707 aa13.33□□□□□ -0.28
UBE2D3-210ENST00000453744 HLA-EP13747 358 aa13.33□□□□□ -0.28
UBE2D3-210ENST00000453744 AKR1A1P14550 325 aa13.33□□□□□ -0.28
UBE2D3-210ENST00000453744 XKP51811 444 aa13.33□□□□□ -0.28
UBE2D3-210ENST00000453744 MAPK12P53778 367 aa13.33□□□□□ -0.28
UBE2D3-210ENST00000453744 COL9A2Q14055 689 aaPredicted RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms